Array 1 25627-28703 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAEPUU010000016.1 Klebsiella pneumoniae strain k39 NODE_16_length_66208_cov_72.397421, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 25627 29 100.0 32 ............................. GAGCAGGCACCCGCCGCAACGACGAAGAGCGC 25688 29 100.0 32 ............................. AAATCAGCCAGCACCACGATTCTGGGAAATTT 25749 29 100.0 32 ............................. ACAGGCTTACCCGTATTGAGACGGTTGCTGAA 25810 29 100.0 33 ............................. GAAACCCCATCAGATGACCCTCCCCATGTTGGC 25872 29 100.0 32 ............................. TTGCCTGGTCTGCTTGGTGATGATCCGTGGTA 25933 29 100.0 32 ............................. TACAGAACGACTGAGGCGGCGTGTATTGCATA 25994 29 96.6 32 ...............A............. GATCTTAACTCTATTGCCAATGGCGCAATTCA 26055 29 100.0 32 ............................. GGCGATGCGCGCTCTGCTGGCTATCGGTAAAA 26116 29 100.0 32 ............................. AATGCAGCAACCGGCAAATATATCGCCGGTAA 26177 29 100.0 32 ............................. GGGCTGCCGCACGCCTGGGACGAGTCGAGCCC 26238 29 100.0 32 ............................. CCGCAATAACAAAAATAAATGAGGGTTAAAGT 26299 29 100.0 32 ............................. GTAAATGGGAATGAGTAGAAGAGCGTCATTGG 26360 29 100.0 32 ............................. CCCCCGCGCACATGCTTAAACGCGCTATCACG 26421 29 100.0 32 ............................. GGCATCTGTTGTGTAATGTTGAGTTTTTTTCA 26482 29 100.0 32 ............................. CAGGTTAAACATGTAAAAAATGACCGTCGCCG 26543 29 100.0 32 ............................. AATGCAGCAACCGGCAAATATATCGCCGGTAA 26604 29 100.0 32 ............................. GGGCTGCCGCACGCCTGGGACGAGTCGAGCCC 26665 29 100.0 32 ............................. CCGCAATAACAAAAATAAATGAGGGTTAAAGT 26726 29 100.0 32 ............................. GTAAATGGGAATGAGTAGAAGAGCGTCATTGG 26787 29 100.0 32 ............................. CCCCCGCGCACATGCTTAAACGCGCTATCACG 26848 29 100.0 32 ............................. GGCATCTGTTGTGTAATGTTGAGTTTTTTTCA 26909 29 100.0 32 ............................. CAGGTTAAACATGTAAAAAATGACCGTCGCCG 26970 29 100.0 32 ............................. CACATTGCCCGGTCTGAAAAGTATTTGAAAAT 27031 29 100.0 32 ............................. TCCGCACAGTCAAACGCTCCAGACACCAACCC 27092 29 100.0 32 ............................. CCGGAACACCACCAGTAACAGCTACTGTAGGC 27153 29 100.0 32 ............................. TGACCCTGTTGATTTTGTTCCAGGTAATACGT 27214 29 100.0 32 ............................. TTAACCTCGTCGTTCTGGTTTCCGCCCAGGAT 27275 29 100.0 32 ............................. GAACCTGAATTCGAAGGGTGGGTCATCCTTCC 27336 29 100.0 32 ............................. GGACCCCGAGCGACCCGGTCACCCTCCGACCT 27397 29 100.0 32 ............................. CCGTCGAACGGCGGTTATATCCATCTTGAGTC 27458 29 100.0 32 ............................. ACCGATCCCACAATTGCGGCGGTTGAGATTGA 27519 29 100.0 32 ............................. GTTGGTAATTACTGCTGTGTGTTACGGATAAA 27580 29 100.0 32 ............................. CCGATTGTCTGGCGGTCGAGCGCCATTTGCTC 27641 29 100.0 32 ............................. TGCCGGACGTTGTACCTGTGAGTTAATTCTTC 27702 29 100.0 32 ............................. CGATAACCGGGCGTTTCGACTGAACTCACCTC 27763 29 100.0 32 ............................. TTAATACCAGGGGGCAGGTTCAGCAGGTCCCC 27824 29 100.0 32 ............................. CCGCTTTAACCCGCTCCGGCAGATCCGGGTGA 27885 29 100.0 32 ............................. CCCTCCGCTTTCAGGGTGTGGCTGATATCACC 27946 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT 28007 29 96.6 32 .............A............... TGGGTAGAGGTTAACTGGTTATTGGTCATTGA 28068 29 100.0 32 ............................. ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 28129 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 28190 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 28251 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 28312 29 100.0 32 ............................. GCAATCCCAGAGCGCGAATATCTTGGGCTCTC 28373 29 100.0 32 ............................. GACATGGCGCGCGAGTTTATCGACGCCTGCGC 28434 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 28495 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 28556 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 28617 29 100.0 29 ............................. GGGTTCACTTGGGTGAAACTGAACTAACT 28675 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================= ================== 51 29 99.4 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCCTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT # Right flank : CGTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //