Array 1 927-3576 **** Predicted by CRISPRDetect 2.4 *** >NZ_RZUX01000067.1 Klebsiella pneumoniae strain 106E10 106E10_S85_R1_contig_67, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 927 29 100.0 32 ............................. GAGCAGGCACCCGCCGCAACGACGAAGAGCGC 988 29 100.0 32 ............................. AAATCAGCCAGCACCACGATTCTGGGAAATTT 1049 29 100.0 32 ............................. ACAGGCTTACCCGTATTGAGACGGTTGCTGAA 1110 29 100.0 33 ............................. GAAACCCCATCAGATGACCCTCCCCATGTTGGC 1172 29 100.0 32 ............................. TTGCCTGGTCTGCTTGGTGATGATCCGTGGTA 1233 29 100.0 32 ............................. TACAGAACGACTGAGGCGGCGTGTATTGCATA 1294 29 100.0 32 ............................. GATCTTAACTCTATTGCCAATGGCGCAATTCA 1355 29 100.0 32 ............................. GGCGATGCGCGCTCTGCTGGCTATCGGTAAAA 1416 29 100.0 32 ............................. AATGCAGCAACCGGCAAATATATCGCCGGTAA 1477 29 100.0 32 ............................. GGGCTGCCGCACGCCTGGGACGAGTCGAGCCC 1538 29 100.0 32 ............................. CCGCAATAACAAAAATAAATGAGGGTTAAAGT 1599 29 100.0 32 ............................. GTAAATGGGAATGAGTAGAAGAGCGTCATTGG 1660 29 100.0 32 ............................. CCCCCGCGCACATGCTTAAACGCGCTATCACG 1721 29 100.0 32 ............................. GGCATCTGTTGTGTAATGTTGAGTTTTTTTCA 1782 29 100.0 32 ............................. CAGGTTAAACATGTAAAAAATGACCGTCGCCG 1843 29 100.0 32 ............................. CACATTGCCCGGTCTGAAAAGTATTTGAAAAT 1904 29 100.0 32 ............................. TCCGCACAGTCAAACGCTCCAGACACCAACCC 1965 29 100.0 32 ............................. CCGGAACACCACCAGTAACAGCTACTGTAGGC 2026 29 100.0 32 ............................. TGACCCTGTTGATTTTGTTCCAGGTAATACGT 2087 29 100.0 32 ............................. TTAACCTCGTCGTTCTGGTTTCCGCCCAGGAT 2148 29 100.0 32 ............................. GAACCTGAATTCGAAGGGTGGGTCATCCTTCC 2209 29 100.0 32 ............................. GGACCCCGAGCGACCCGGTCACCCTCCGACCT 2270 29 100.0 32 ............................. CCGTCGAACGGCGGTTATATCCATCTTGAGTC 2331 29 100.0 32 ............................. ACCGATCCCACAATTGCGGCGGTTGAGATTGA 2392 29 100.0 32 ............................. GTTGGTAATTACTGCTGTGTGTTACGGATAAA 2453 29 100.0 32 ............................. CCGATTGTCTGGCGGTCGAGCGCCATTTGCTC 2514 29 100.0 32 ............................. TGCCGGACGTTGTACCTGTGAGTTAATTCTTC 2575 29 100.0 32 ............................. CGATAACCGGGCGTTTCGACTGAACTCACCTC 2636 29 100.0 32 ............................. TTAATACCAGGGGGCAGGTTCAGCAGGTCCCC 2697 29 100.0 32 ............................. CCGCTTTAACCCGCTCCGGCAGATCCGGGTGA 2758 29 100.0 32 ............................. CCCTCCGCTTTCAGGGTGTGGCTGATATCACC 2819 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT 2880 29 96.6 32 .............A............... TGGGTAGAGGTTAACTGGTTATTGGTCATTGA 2941 29 100.0 32 ............................. ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 3002 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 3063 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 3124 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 3185 29 100.0 32 ............................. GCAATCCCAGAGCGCGAATATCTTGGGCTCTC 3246 29 100.0 32 ............................. GACATGGCGCGCGAGTTTATCGACGCCTGCGC 3307 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 3368 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 3429 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 3490 29 100.0 29 ............................. GGGTTCACTTGGGTGAAACTGAACTAACT 3548 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================= ================== 44 29 99.4 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCCTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT # Right flank : CGTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //