Array 1 35814-35235 **** Predicted by CRISPRDetect 2.4 *** >NZ_FPKD01000013.1 Olsenella sp. kh2p3, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 35813 28 100.0 33 ............................ CGCGCGAGGTCGCGCGCGTCGGTAGACACCTCG T [35787] 35751 28 100.0 34 ............................ TAGGGCAGCACGACCGACTCGGGGTAGCCCCCGT 35689 28 96.4 34 .C.......................... CTTGGCCTGGGCCATGACGGCGCGGAGCGTCCGC 35627 28 100.0 34 ............................ CAAGGCGCTCTTCGAGGCCGCGTGCGGCGGGAAC 35565 28 100.0 33 ............................ CGCGTGCTGCCGAACGGCTCGCTCGCGCTCGTC 35504 28 100.0 34 ............................ CCTGCAGTGGTATTCGGCGATGCGCTTTGCCTCA 35442 28 96.4 34 ....C....................... CGGCGCGGGCCCGTCGCTCGTCGACGGGATAACT 35380 28 96.4 34 ..........................T. CGACAACGAGGGTGCGCCAGAGGTCAACAACGTT 35318 28 82.1 28 ....C.T....A....T...A....... TTCGTCTGGAGGGGGCTGGTCCGAGTGG C [35292] 35261 27 71.4 0 ..A..T.G....A.GTT......-.... | ========== ====== ====== ====== ============================ ================================== ================== 10 28 94.3 33 GTGCTCCCCGCGTATGCGGGGATGATCC # Left flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCCGTGCTCCCCGCGTATGCGGGGATGATCCCCTGGCCAGGATAGATTAGGTTCGGGTCGCCGA # Right flank : CTCCCAAGTTCGGATGGCCGATTTCACGAATTGACGGTTGGTGGCAGTTTTCGTAAAACCCTTGATGTGATATCAGAGCAATGACAAATCATCTACCTGGGGTCTCCCGATTTTCGGGGGACGGGCTACTCGGGGTGCCACCGAAAAACTGCCACCAACCGTAATAACTAGCCAATCGGGCGAGGGCCATCACCCCCCTCGGCCGTGCGTGACCTTCCCAAGCGTCCTCGTCCACCCCTCAATGGCGCGTTTTTACGGTTGGTGGCAGTTTTTCGAAGACCGCCCGAGTATCGGCAGACTGAGTCCATGATTAACCGCTGGTCAGAAATGTGCTTACCACAGATAACATATAAATGCTTTATCGAAAACTGCCACCAACCGTCAATTCGTGATGGAAAGGCTCCTCCGGTGTTCGTCTTGTCGGCTTAGGGCAAACGCTGAGGAGGGGTCGGGTCAACCACGATTGGCCTGACGGCATCCGCTGTTGCCAGGGATACAAA # Questionable array : NO Score: 5.89 # Score Detail : 1:0, 2:3, 3:0, 4:0.71, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.92, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGTATGCGGGGATGATCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCCCCGCGAATGCGGGGATGATCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [16-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [50.0-35.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 36791-36341 **** Predicted by CRISPRDetect 2.4 *** >NZ_FPKD01000013.1 Olsenella sp. kh2p3, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 36790 28 100.0 34 ............................ TCGCGTTTGCATATCGGGCAACCTCACGCGGGAC 36728 28 100.0 34 ............................ GTACGTAAGTAAGTGCATGTGCATCGCATGTGCG 36666 28 100.0 34 ............................ CGACCGCAGGAAGAACCAGCAGACGGGCCAGTGG 36604 28 100.0 22 ............................ CGGGTGGTCCGNNNNNNNNNNG Deletion [36555] 36554 28 100.0 34 ............................ CCATGGCCGCCACGTCGCCCTGCGTCTCCGCGTA 36492 28 100.0 34 ............................ CGATGACCAGAAGTCGCATACCATCAGGCCGTCC 36430 28 100.0 34 ............................ CCTGTCCGTGGAGGGGTCGAGCGAGGTCGTGGGG 36368 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================== ================== 8 28 100.0 32 GTGCTCCCCGCGTATGCGGGGATGATCC # Left flank : ACG # Right flank : ACCTCGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCCGTGCTCCCCGCGTATGCGGGGATGATCCCCTGGC # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:-0.09, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGTATGCGGGGATGATCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCCCCGCGAATGCGGGGATGATCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [3.3-3.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.87 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //