Array 1 2000255-1997134 **** Predicted by CRISPRDetect 2.4 *** >NZ_LT896716.1 Geobacter sp. DSM 9736 chromosome I Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ========================================= ================== 2000254 37 100.0 36 ..................................... ACGAATACGGCCGGCGCCGCCATGTACGCCCTGGAG 2000181 37 100.0 34 ..................................... TCGTCCGGCTGCTCGCTTGCCTACACCGTGCGGG 2000110 37 100.0 34 ..................................... AGTACCCCTTTGCTTGCCAGTTTATGGTTTTGGC 2000039 37 100.0 34 ..................................... CTGCCGGGGGCCGTTCAGCCGCGCCAGCGTCGCC 1999968 37 100.0 35 ..................................... CCTGGTTTCGCCGGTGAAGTGTTTGGCGAAGGCCG 1999896 37 100.0 35 ..................................... AATGAGCTCGCCGTCGCGGTCGGCAAGGGTGAGCC 1999824 37 100.0 35 ..................................... GTCGAGCTTCTCGCCTGCGACGTCCGCGCCGCCAC 1999752 37 100.0 33 ..................................... ACCACCGCGACCCGGTAGGTACGCAGATCCTGC 1999682 37 100.0 34 ..................................... AAGGATGAGGTCCGGTGTCCCCCCATACTTCAGC 1999611 37 100.0 34 ..................................... CTTCTTTCCTTTACCCTGCCTCACCGTTACTATC 1999540 37 100.0 34 ..................................... ACCCATGAGCTTGGGCACGTGTTCGAAAAGACCC 1999469 37 100.0 34 ..................................... TGGGATTGGGATAAATAATGGCCCGCTGCATAGA 1999398 37 100.0 35 ..................................... CTCCCGGCCGATTTCCGCGGGTGGGACGAGCGACT 1999326 37 100.0 34 ..................................... TCGGCAATAGCCGAGCAGGAGCTGCAGGAGCAGG 1999255 37 100.0 41 ..................................... AAGTTTTCCTGATACAGGAAGGCAATGCCTGGATTGCTAGA 1999177 37 100.0 35 ..................................... GAATACTACGATTCGACCGTTACCGGGTTCGGTGT 1999105 37 100.0 35 ..................................... ACCACAACCAAGGAGAAGGTGTCAGGGACCACTGC 1999033 37 100.0 37 ..................................... AACGAGGTCAATAATAGACGGTTTAAGGGTGATTACC 1998959 37 100.0 35 ..................................... AAGCATCGGGGTGGCCCCTTGCGGGTCGCTCAAAA 1998887 37 100.0 34 ..................................... ATCCAGCGCATCATCAGCCGGCTCCCCCGCGCTG 1998816 37 100.0 33 ..................................... ATCCGGAACGGCCGCTTACTGCCGTCGTGCCCG 1998746 37 100.0 34 ..................................... TATGATTAGTGGCGCTAACGGCCTGGCGGCCTTG 1998675 37 100.0 36 ..................................... TGCATCATGTCCTCAATCTGGCGTAAGCCAGACCAG 1998602 37 100.0 37 ..................................... CAGCCGTCAGAGGGGAGGAAATCAGGGAGCGAGAGCT 1998528 37 100.0 33 ..................................... ATGTTTTACGACGTCGTCGCCGATTATCTCCGC 1998458 37 100.0 36 ..................................... TCTATGACGCCCGGAATCCTCTCGCCCATACTCAGG 1998385 37 100.0 35 ..................................... GAAGATCACCGAAGAGCAGGCGCAGTCCACGACCC 1998313 37 100.0 34 ..................................... ACAACAGAACCGTAATATCCGCGCACCCAGTTCT 1998242 37 100.0 34 ..................................... TCGCAGGCGGTTCCCTTCTTCACAGTCGCAGTAC 1998171 37 100.0 34 ..................................... GATAAACGCATCCACCATCAGCCCCGCCAGGATC 1998100 37 100.0 35 ..................................... GAGGTTTCGGCCATCGCCGAAGGGACCGAGCTGGA 1998028 37 100.0 34 ..................................... CCGCTCATAGTCGTACTTAATGCAGATGAATTTC 1997957 37 100.0 33 ..................................... CGGAGCTGGGGGGAGTGCGGGACGGGTGGCGGC 1997887 37 100.0 34 ..................................... ATCTCGTCGTCGCACTATTGCTCTGCATCACCGT 1997816 37 100.0 34 ..................................... GTCACTCCTTACGGCACCGGCCAGAGCCTTGCCG 1997745 37 100.0 35 ..................................... ATCACACAGCAGGGCGTAACCATCAGCGCGGGAAT 1997673 37 100.0 34 ..................................... ACGTCGATCAAGGATTTATTCACGTCGCCCCTGA 1997602 37 100.0 34 ..................................... ACGTACAACGGCCAGAGCTGCGAGGCGGTTGCCC 1997531 37 100.0 34 ..................................... ATACGGTGCATTCTTAACCGGCGGCGTGGCGAGC 1997460 37 100.0 36 ..................................... AAGGGTCCTATATCCGGACCCGCTGGCAGGCAACGA 1997387 37 100.0 37 ..................................... TGCCGTATTCGGTTACCGGCTGCCTAAAGCTCCTTCT 1997313 37 100.0 35 ..................................... AGTCCCTCGGCGTTGTGCTCGGTGCACGACCCGAG 1997241 37 100.0 34 ..................................... CAGCCCGGCCTCATGCTTGCCGCCGGCGGCCGCC 1997170 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ========================================= ================== 44 37 100.0 35 GAAGCGCCCGTCCGCAAGGGCGGGCGAGGATTGAAAC # Left flank : ACCCGTCCTTTACTCCTAGGAGGAGCGAATGTGGATTGTCGTGGCCTACGATGTCAATACCGAAACGCGACAGGGGCGCAGGCGCCTGCGTCGCGTGGCGCAGGTCTGCAAGAACTTCGGCCAGCGGGTCCAGAAGTCGGTTTTCGAGTGCCAGGTGAATGAGATGAAGTTCGAGGACCTGCGCAGAAAGCTCCTAAGAGAGATCAGCGAGGAGGAGGATAATCTACGTCTGTACCGGCTGACGGAGCCGAGGGAGAAGAATGTGGAGAGTTACGGCCAGACGCGGACGATTTTTTTCGATGATGATCCGCTGATTGTCTGAGCGCGAACCTGATGCTCGTGCGGAAACACGGGTGGGTTCGCGGATGAGACAACCTCATGGAATTCGGCATGTTAGTAGGAGAGATCAGCGTGTAGCGCGGCCCTGCTCAGGCATTTTGACCAGTTTCGCGAAACTGCGCTGGTAAATTGTTGGAACTGTACCCCTTTTAAGGGGGACA # Right flank : GCGGTATCGCGCGACGGCATGACGAAGAGGGTGTCGCGAAGCTCTGGCTGCGGGATTTGCGGCGAAGGCGAAATACTTTCCGATTTATATCTGCACCGCTTCATAAGCGGCTCTCATTTGTGAAGCCGCTGGGAATCTTGGGTGAGGCCGGCACTGTGATGCAAAACGTTCCGGATCAACCCTATAAAAACATTCACCTTCTTTTGTTTATTCTGCCTCCTCGGCTATTTTCCAATCATCACTCGCCATCTTGCGGTATTCTTGGGTAGAAGATCGAATAAGGCGGAGAAGTTTTAAGAACTTTATTTCCCTCATCGTTACTGTTAACTTTTCCTCGATATGCTTATATCCAGTAGTTTCGTTATTTTCTGGCCCTTCGTAGAGAAAACGCGGGCGTTGCCTGCTATACTTCTGATTCGGAACATGAAAAAGGTCTTTCAATTGCAATCTCCACGGATCGGGAGACAGAATGCAGTTCTACGAGTATAAAGGCTTCACCA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GAAGCGCCCGTCCGCAAGGGCGGGCGAGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: R [3,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-12.10,-17.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [35.0-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.51 Confidence: HIGH] # Array family : NA //