Array 1 1005277-1007747 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABDWH010000003.1 Klebsiella pneumoniae strain NCTC9144, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 1005277 29 100.0 32 ............................. GCGCTACCATCGATCACTATCACACGCAGCAG 1005338 29 100.0 32 ............................. GAAATATCCGGCAGCGACGCGATCGCGGTATT 1005399 29 100.0 32 ............................. GAAAGTTACTATATTTGTACTGAGTGTGGACA 1005460 29 100.0 32 ............................. TCAGCTGCCGCAGCGATATTCTCCAGAATGTG 1005521 29 100.0 32 ............................. ACCTGCCAGTAATCTGAATAATTGTGGCACCA 1005582 29 100.0 32 ............................. ATTTGAGGAGAATCTGTTTGCGCTTACTGATA 1005643 29 100.0 32 ............................. CACTGCCATCAACCATAGGTGCGGATGTGCAA 1005704 29 100.0 32 ............................. CTTCCAGTCCCCTTCTGCCGGAACCTGGTCAG 1005765 29 100.0 32 ............................. CCCTCAAGCCTTACCCGGTTGAAGATGTGATG 1005826 29 100.0 32 ............................. GTGGCTTGGTTTGCTCGATAACAGTCACTGTA 1005887 29 100.0 32 ............................. CCAAACTCAGACTTGCACCCTTTAATCTGCTC 1005948 29 100.0 32 ............................. ACTATCACACTACAGGCAGTAAACGAGCTCAT 1006009 29 100.0 32 ............................. CCCGGATGTTAACCTCGTCGTTCTGGTTTCCG 1006070 29 100.0 32 ............................. GAAATCCCGACGCCAATCCCCGGGGGCGCTAT 1006131 29 100.0 32 ............................. CGCGCCTGACCGCGGCGATCGGCGAGATTCGC 1006192 29 100.0 32 ............................. CAGCCCGCGTGAGATCCATTGTCGTAGTAGAG 1006253 29 100.0 32 ............................. GCCGCTTATCCCTGGGCTACCGGTTACGACGG 1006314 29 100.0 32 ............................. ATCAGCACGAAGCTGCGCCAGTTCGGTGATAT 1006375 29 100.0 32 ............................. CGCTCCAGAAGGGATCCCGACCCACTACTGCA 1006436 29 100.0 32 ............................. CCAGCGATTGTGTTGCAGTGGCTGACTTCGAT 1006497 29 100.0 32 ............................. GGCAGATGAAGTGGTGCAGGGCGACAACATCC 1006558 29 100.0 32 ............................. GAGTGTTCGGGCTCCCCAGTGATAATGCGCCA 1006619 29 100.0 32 ............................. GCAAACGAGGCAGGGCAGGGTGCGTACGATGC 1006680 29 100.0 32 ............................. AAAACGGCGGCGTTGTCACCCGAACAGAGGAA 1006741 29 100.0 33 ............................. GAGCGGCTCGTTATCACCGAGGCGACGGAAGAC 1006803 29 100.0 32 ............................. CCAGTCAGAATCCCGCCAGGTTCAATCAGAGT 1006864 29 100.0 32 ............................. GCGATCTGATGTTTGTGGATACTCAGGGCTAT 1006925 29 100.0 32 ............................. CCTAACCACTTCACCGGCACTGCACTATTTAT 1006986 29 100.0 32 ............................. GCTAATGCTGAAATCCCATTCAGAAATGACCT 1007047 29 100.0 32 ............................. GCGACGAAAGATGTATCCGCTCCTGGTTCCTC 1007108 29 96.6 32 A............................ TGCAGTTGCGAGATTGTCAGCCTGCTTCTCTG 1007169 29 100.0 32 ............................. GAGCTGGAAGACGAGGACACCGGGGAGCGTCT 1007230 29 100.0 32 ............................. ACGATAACTAAACTCGATGATGGTCGCTACAA 1007291 29 100.0 32 ............................. GCGACTGGAACGGGAACGATGTTTACTGGCTA 1007352 29 100.0 32 ............................. ACTACAGCAGTCGTTCTTTAATAATCAGGTCA 1007413 29 100.0 33 ............................. CCTGCTTGCCCTGGCGCCATGGTTCGGTAAAAA 1007475 29 100.0 32 ............................. CCTCCGCGATAGTGTTACGTCTGATCATATTC 1007536 29 100.0 32 ............................. GGCAGCGCCTCGACTGCACTGCCGATTTTGAG 1007597 29 100.0 32 ............................. ACGGCCCGACAGAACGGCGCTGGAATCTCTCG 1007658 29 100.0 32 ............................. ACTGATATCACCGAACTGGCTCGGGCCATGAA 1007719 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================= ================== 41 29 99.3 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : TGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCTTTCCCGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAAACAGTAATATATCTTTAGT # Right flank : CGTCCACTAACGTTATCGATCCTGAGGGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTGGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATATAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATT # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //