Array 1 1295370-1298303 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP041030.1 Francisella sp. LA112445 strain LA11-2445 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 1295370 37 100.0 36 ..................................... ATCTCAACTTATTCATGTAATTATCATTAGATAGTA 1295443 37 100.0 35 ..................................... TGGAAGATCTGCATTCGGGTCACCAGTGTTACATT 1295515 37 100.0 36 ..................................... AGTTAAAAGCTTTACCAGGACTGATCGACTCATAAA 1295588 37 100.0 38 ..................................... CAATTAAGTTCGTTAAATCACAGTAATGCAAGTTTTAT 1295663 37 100.0 35 ..................................... AAGACTCATATCAACAAGGCGTATGATGGTGAGTA 1295735 37 100.0 36 ..................................... TAAATTACTAAAGGGCTTGATTTAAAAGATAGACAA 1295808 37 100.0 34 ..................................... GTTTTTAGTTTTGCCTGGCACTGATTGAAACTTA 1295879 37 100.0 36 ..................................... GTATGCTAAAGATGTTATGAAAATAGTTAATTGTGA 1295952 37 100.0 36 ..................................... TTAATTTAAACTAAGTGTAGCCATTTAGTTAGAGGA 1296025 37 100.0 35 ..................................... TTTTAAACTTAAATAATACACGTGGTCGCAATTTG 1296097 37 100.0 34 ..................................... GTTTAGGAGTTTCGTATAATCCAATATGTGATAT 1296168 37 100.0 35 ..................................... TAATTGTAACGGTGAGGTCGTAGAACAATATACGT 1296240 37 100.0 36 ..................................... TTCAGGATGGTGTTAGCGGATCTTACAAGGGTCAGA 1296313 37 100.0 34 ..................................... TTCCAATTCTTTTGATACTATGGCCGACTCTTAC 1296384 37 100.0 35 ..................................... AGTCTCTTCATTCATCATTTCCTGAATTTCAGCTT 1296456 37 100.0 37 ..................................... ATACCTAGTAATACCTGCGAGATGGCAAGACAATAAA 1296530 37 100.0 35 ..................................... ACCTGTACTAGCTCCACCAGTTGAGCCACCTGTAC 1296602 37 100.0 34 ..................................... CGCTCGGCTTAACAACTCCAGCCCAATCACAAGA 1296673 37 100.0 35 ..................................... TTGATTGAGGTAATCAATAACTTCTGTGCAAATAT 1296745 37 100.0 35 ..................................... CGCTAACAAAAACTACAATTACATGAAAGCAATAT 1296817 37 100.0 37 ..................................... GTAGCTTGGTCAGCCCAAAAGGCAGAAACGGCATTAT 1296891 37 100.0 37 ..................................... TTAATAATCTTGATTACTCGCAGGCTTTTACGTTTTT 1296965 37 100.0 35 ..................................... TTATATTAGAAGTCAGAAAGATAACCCAGCTTTTA 1297037 37 100.0 35 ..................................... TGTTTATATCATTTAGCTAATAAATATAAGTGGCG 1297109 37 100.0 35 ..................................... GTATTAACTATCTAACGGTATATTGTTTGATATGA 1297181 37 100.0 36 ..................................... TAACACTAATCATGAGAATCATGAATGTAACCATTG 1297254 37 100.0 35 ..................................... CCTAAAAGTGTTACTAGCACCTAAGGCATCTAATT 1297326 37 100.0 34 ..................................... ACAAGCTCTGCCTGAGTTAATCCCCAGATTGCGG 1297397 37 100.0 36 ..................................... AAGCATCAAACCAAGAAGTAGAATTATTACCCATGT 1297470 37 100.0 36 ..................................... CTCTACAAGTCTTAACATCAAAGATGATGTTTTTCT 1297543 37 100.0 36 ..................................... CTTCTACAAGCACAACGAATGAAAATATACCATCTG 1297616 37 100.0 36 ..................................... TGCAAATAGCTGTTACTGGTCAAACAAATACGCCAT 1297689 37 100.0 34 ..................................... GGTACACCTATTTATACAAATATTCCACTTAAAC 1297760 37 100.0 36 ..................................... TGCTTGCATAAGCTGAAATGTTTTGTCAGCAGATTC 1297833 37 100.0 35 ..................................... ACAAGAATTTGAAAGATTTTGTGATTCAATGGATT 1297905 37 100.0 36 ..................................... CAATAACATTATTATCACCATCTATTAAAATAGGAT 1297978 37 100.0 36 ..................................... TAGTTCCATAATCTTGGCTCTCATTAACTCATTTTT 1298051 37 100.0 35 ..................................... AACGATGGAAGTACATATCTAAGCCCTGATGCTAA 1298123 37 100.0 34 ..................................... CTATTAGAGGTTTTGGAATAACAGACTACTTATA 1298194 37 100.0 36 ..................................... TAATATTGATTCAAATAAAATAACAAATGAGCGTAT 1298267 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ====================================== ================== 41 37 100.0 35 GTTTCAGTAGCTAGAATATTTGGTATACTACTGTTGG # Left flank : ACTATATTATCAATGATCCTAAAGCCTTCCTCGGTAGAGAAATCTGGATGCCCTAGCACCTCACATTCTGAAGATGAACGACAATGGACACACTTGAGATTACAACGTCTAGTTGTTTCCCATGCCATCCATTTAAGTTGGTGTTTCACAGTATTTGCCTAAATAGATAATCTAAATTTATTAATATTAATTATAGCAAATATACTCTTAAACGAGTATTACTAAAATAAAATCTACAAATACTTAAACCTCTTAGGTATTATATAAACAAGTTTTAAATACTAATCTTATTAGAAATGAAATTAAAGAAAATATTTTTAGTAGTTGCATTAGCTGTTTGTTGTATTAGTTTAAATAGCTGTATATTAAAACTACCATTTCAGATTGTCGGTGATGTGGTTGATGATGTTACGCCTTAGCAATTATTAACTAAATCCAACTTCTTTTTGACTTCTTGCCAATCTGGCACTCTTGTAAAACTATTCATCATATAATCAAAT # Right flank : GAGCCAAAACAAACCTAGTGTTTATAAGGCTTTAAGAGAATTACTTAAAGGTATTTTTTCGAAAATACTCTACTTGTCAAAAATAGTAGACATTTTGCGAAAAAGTATCTAAAATATCAAATGTACCAAATATTTAATGCTCTGTAATCATTTAAAAGTATTTTGAACGGACCTCTGTTAGACACGTCTGATTAATTTAGAGCAAAAAATTTGCCGCATAAGTGGCTTTTTTTGTTTGTGTAAATATCGATTTGAGATACCCAATCAAGTTGGGTATTGCGGATAACTCTATTCATTTCGATTGAGTTCAATAAACTTTAACAAGATCGCTGAGCCTGTCGAAGTCATCATACTTTACAGCATCGGGCATATCGACTAGTACAATTGACTTATATCTCTAGCGGTCATTACAAAAGTTAAGGTATTGACACTGTATACACTGATGATCAGAGGCTGAAGAGTCAGGTTTGTTACCACTATCTAAAGTATCAGATATATTT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAGTAGCTAGAATATTTGGTATACTACTGTTGG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-4.30,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [70.0-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0 Confidence: MEDIUM] # Array family : NA //