Array 1 191559-190597 **** Predicted by CRISPRDetect 2.4 *** >NZ_JH414596.1 Peptoanaerobacter stomatis strain CM5 supercont1.1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 191558 30 100.0 37 .............................. TAATAATCTTTATCAACTCTTCTTTATTACCTGCTTC 191491 30 100.0 37 .............................. GTTTTTCGTTTTCTTCAAGTTTTTACATTTATAATAT 191424 30 100.0 37 .............................. TTGAAATTTGAACTTGATGTCCCGTTTATTTTTGCAA 191357 30 100.0 37 .............................. TTGAAATTTGAACTTGATGTCCCGTTTATTTTTGCAA 191290 30 100.0 33 .............................. TTTGCTCCGTCCATAGCGGATGACAGTTTTTAA 191227 30 100.0 36 .............................. TATGGAAGAGTCGCAGGAGATTACCCAAGGTATACG 191161 30 100.0 36 .............................. GCAAGTCTTATAATCTCCTCATCTGATAAAGTACTT 191095 30 100.0 37 .............................. ATTGTTTTACCATTTTATATTATATACTTTTTGTATA 191028 30 100.0 36 .............................. TTATTACAACATATAGGTCTTACATCTTCCTCAAAT 190962 30 100.0 36 .............................. CAGTTTAAGGAAATGATAAGTAATATTGAACAAGGA 190896 30 100.0 37 .............................. TTATCTTCTATTTCTTTTGATACTCTTTCTTTATCAA 190829 30 100.0 38 .............................. TTCCTCCTCTTTCCCATATCAAAACCCCATCACTGGTA 190761 30 100.0 38 .............................. TTATCAAAGACAAAATCAGACGTAATATACACAGATAG 190693 30 100.0 35 .............................. TGTACATCAAGTGCTAAATATTTAGGCGGTTTAAC 190628 30 96.7 0 ........................A..... | C,G [190624,190626] ========== ====== ====== ====== ============================== ====================================== ================== 15 30 99.8 36 ATAGTAAAATCACCAAATTGGAATGTAAAT # Left flank : TTAAAATAAAATTAAATTTATTATAAAAAGATGAGAGGATGTCAGATGTATATTATACTGGTTTATGATATATCATTAGAAAATGGAGGTGCAAAAATTTGGAGAGATACTTATAAAATATGTAAAAAATATTTATCACATGTGCAGAATTCAGTTTTTGAAGGAGAGATAAGCGAATCTCAGCTGTTTGAATTAAAAAAAGCAACTATCTAAAACAATAAGAAAAGATATGGATTCATTAATATTATTTAAAAGCAGAAATGAAAGATGGTTGGAAAAAGATATTTTAGGAGTGGATATTAGGGCTACAGACAGATTTATATAACTGTCGATTGTAGATAAACATAAAATATTAAAAGGTAGACAGGATAAAAAAATATTGATATAATAATAAAAATAAATATTAAAGTTAAATTTTATATGATAAAATAAATTTTTTGTTGTAGATAGACAAAACATATGTCTATAACATAGTTATTTCAATATATAAAATTAAACCT # Right flank : ATTTCTATGGCAAATTAATGTGCTTCTATCATTATTCCTTTGAGGTATTAAAAACATATCAGGAAGAATTTGCAAGATGGAAATATACTGAATTTAACGAAAGGGGAAAAATTAAAAATATTGTTTTGTTACAAGATGTAGAAAATAGAGCATTTGAAAAAATAGAAAAAGTTCAAAAAAAGTACAGCAGTTTTTTAGTAAGTATGAAAAAACTACTAAAGATATAATAAGGCTATAAAAATAGCATATTAAAAAGTGTTTGTTGTTTTTTTCTAATTAAATATATTTAAGGAGGTCTTATGGAAAGAATACAAGTATCAAAAGAGTGGATGCAAAAATATGAAGAAATTAAGAGTTTAATGACATCACCTGTAAATTATGCACAGTGTTTTGGTATGAAAGAAATACAGGGCAAGGAAATTTTTGTTTTAGATATGGGAGAAGTGACTTTCCCCAGTGGAAAAATTTTGGTTAGAGATCCTTTAGTATGGCTCAATAGA # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATAGTAAAATCACCAAATTGGAATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.20,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA // Array 1 21610-22624 **** Predicted by CRISPRDetect 2.4 *** >NZ_JH414611.1 Peptoanaerobacter stomatis strain CM5 supercont1.16, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 21610 30 100.0 37 .............................. CTTGTACTATATTAATTGTTTTAACTCCAAGTAAATC 21677 30 100.0 35 .............................. ATATTTAGCAAAAGTATGCGAAAAAATTCAAATAA 21742 30 100.0 35 .............................. ATAAGATGTGAGCTTATAACAACTCTTATGAATAT 21807 30 100.0 37 .............................. TTTATTGTCACTGTATCCATATACATAGCTGCTAATT 21874 30 96.7 36 .................C............ ATAATAAAATCTTATGTCCAAAATGAAAGAGATAAT 21940 30 96.7 36 .................C............ CTTTCAATTGGTGCAAGGTTGAGTATTGCCCTAATT 22006 30 100.0 38 .............................. ATATTTTCCCTTTAAATCAGGAAAACGTTGTTATAGAT 22074 30 100.0 35 .............................. GCGTCTAAAATTGGTAAATCTGTTGAGTTTACCGT 22139 30 100.0 37 .............................. GTTAATATTTGAAATAATAGCATTGTAGATATTATTT 22206 30 100.0 36 .............................. GCACTTATGCAAAACATTGCAAAGGGAATGGGTGTG 22272 30 96.7 36 .................C............ ATCGTTACTGATATAGATGATTTCGAAGATGCACTA 22338 30 96.7 38 .................C............ AAATCCACACCCACATTGACCATTTGTATTTTCTTGCA 22406 30 93.3 37 .................C......A..... ATTTATTAACATTTCTTCGTATTTTTCTTTTGCTTCT 22473 30 96.7 37 .................C............ TCAGGATTTATTCCTGCAATGTTACTCATTTTTGTTA 22540 30 96.7 25 .................C............ TGTGTACAAGAGCGATAAAATCGTT Deletion [22595] 22595 30 70.0 0 CT.....T.G.....A.CG.A...A..... | ========== ====== ====== ====== ============================== ====================================== ================== 16 30 96.5 36 ACTATAAAATAACCATATTGGAATGTAAAT # Left flank : ATAATCAAGAAATTGAAAAATAAAATTATTTTATTTTTATATTATGTATAATTGTACCAAAAAAAACATTTTTATTAAAGCATTATTTTAATAAAAAATTATTATAACCTATGATATCTTGCATAAATTCTATAATTTCAGCCTAACAATATAATTTACAAAACTTAGATAAAAAAATAATTAGTTTATTTTTTAATTCCTCATTCACCATAAGTTTCCTAAATCTCATTTCAAATAAAATTTTAATTTCTTTTTCAATTAGAAATTTTATAAGTTTGTTACTATTATCCCAATAAATTCATGTTTATATAATAATCAATTATCTTTGTCGATGTGTAATAAATAAAAATAAATAGGAGATAGACAGAATAAAATAATATTGATATAATAATACATATAAAATTTAAATCTTATAATTTTATAAAAATAAACACTGTATAATCTATGTCGACAAATTGAGGTATTATACTTTACTTTTTGCAATGTATAAAATAACACCT # Right flank : TATGGAACTCAGAATGAGAGTGATAAGTTATTAAGGAAGTCAGGGTATATTCGTCAAATAAATTATCCATGCTCTAAAAGAAAGGAGGAATTGTGTTATAAATATATTTAACACATGAGAAAAGATGAATATTATAAAGAAATCAATAATGGAGTTTTGTTTGGAGCAGGTAACACCTATGATTCATTTTCAAGGAGAAGAGAAATCAGCAGGAATACGAGCAAGTGATTTGAAACCTCGGTTTGATGTTTTTTTAAAAAGATATTGGTATGACTTGAAGACAGAAAGAGAAAAAACGAAAATAGAAAGCTGTATTTTAAAACAAAATGAGGAAGAATTCGAAAACAATTCTTTAGATGAAAAAAAGAGAGTTTCGTTTGATTACAAGGTCAAAATCTTTAACAACGCTTGTAAAAACTCTAATATGACCTTTTATAAAGAGAAAAAAAATGGTAAAAATTCATTTTATGGCTCATTTTATGGAAAATTAGAAGATAATA # Questionable array : NO Score: 2.89 # Score Detail : 1:0, 2:0, 3:0, 4:0.82, 5:0, 6:0.25, 7:-0.01, 8:1, 9:0.83, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ACTATAAAATAACCATATTGGAATGTAAAT # Alternate repeat : ACTATAAAATAACCATACTGGAATGTAAAT # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.60,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA // Array 1 1140-2 **** Predicted by CRISPRDetect 2.4 *** >NZ_JH414597.1 Peptoanaerobacter stomatis strain CM5 supercont1.2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ========================== ============================================================ ================== 1139 26 100.0 52 .......................... AAGAGCATTCCATACAGCTTTTTGTGATTCTTGCATATTTTTGTATAAAAAC 1061 26 100.0 54 .......................... TGGTATTGATAAAGAAAGTATGTTAAAAAAGATGAGTTCAATAAGTATAAAAAC 981 26 100.0 50 .......................... TTTTCCAGTATTTATTTTATCCATGTAATCAAATCTTCTAGTATAAAAAC 905 26 100.0 47 .......................... GGGTGTAGTAGGTAGATTAGGTAGAGTTCTTGGACCTGTATAAAAAC 832 26 100.0 57 .......................... TTTTTTAAATTAGAAAGGAGATGTATATATGATAAATACTGCTTTGAGTATAAAAAC 749 26 100.0 54 .......................... TGGAATAAATTTATCAGATGGAAATTGAATATTATCATCATTTTGTATAAAAAC 669 26 100.0 53 .......................... CCTAAACCTCCTGCTGGTGGAACTGGTGGAGAAGGAAATGTAGGTATAAAAAC 590 26 100.0 51 .......................... TTATTAACAAAATCTACTGCTTGATTAATAATATTATTTTCGTATAAAAAC 513 26 100.0 51 .......................... ATGATAATATTTGTTCGAATAAATCGAACAATGATGATTTAGTATAAAAAC 436 26 100.0 53 .......................... ATAAGTTTGGATGAAGGAGATGAACTTGTAAATTCATTGTTGAGTATACAAAC 357 26 92.3 54 ............T.....G....... TTGTCAACTCTTGCAAACCTTTGTGCCGTATAATATATACGTACGTATGAAACA 277 26 96.2 58 ..C....................... TTGAGAAAAACTTACATTAATATTAAACTCCATTTTATACCTCCATAAGTATACAAAC 193 26 100.0 54 .......................... TTGTCAACTCTTGCAAACCTTTGTGCCGTATAATATATACGTACGTATGAAACA 113 26 96.2 60 ..C....................... TTGAGAAAACTTACATTAAATATTAAACTCCATTTTATAACCTCCATAAGTATACTAAAC 27 26 96.2 0 .........................A | ========== ====== ====== ====== ========================== ============================================================ ================== 15 26 98.7 54 ACATCTCCCCGTAAGGGGACGGAAAC # Left flank : CTATATAAACCAATGACTATAAGGTGATAAAATGGATATATTGGAAAAAGATTTTATATGTGCAAATAAACAAGAATTATTTACAACAATAGTATTTTATGATATCATATCCAATAAAAGAAGGACAGAATTGGTAAAAATATTAAACGCTTTCGGATATAGAATACAAAAATCAGTATTTGAATGTATACTTACCACAAAAAAATATCAACTCCTGCTAAAGAAAATCAAAAAATTTTCAAAGCCCGAAGATTTGATAAGAGTATATAAACTCAATAAAAATGTGGTAACAACCATATTAGGAAAAAATAATGATATTACCTATATAGATGATATATTCATATAATTTTTTTATATTCAATGCCGATATTTGCAATTTCAACAAAAACTTCCATTCTGCACCTAAAAAATTATAAATAATTTAAAAAAATCAAAGCGTGCCGAAAAATACACATCAAACCCTGTAATATACATCTCAAAAAAGCAAAGGGTATAAAAAC # Right flank : AC # Questionable array : NO Score: 5.60 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:-0.59, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ACATCTCCCCGTAAGGGGACGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-8.20,-9.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [0.0-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.42 Confidence: HIGH] # Array family : NA //