Array 1 18835-14689 **** Predicted by CRISPRDetect 2.4 *** >NZ_VHLN01000103.1 Flavobacterium sp. I-STPA6A Contigs2_25_len:52220, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================================== ============================== ================== 18834 46 93.5 30 .......T...TA................................. ATTAACTGAATCACAAGCGTACCGAAATAA A,AG [18819,18829] 18755 46 100.0 30 .............................................. ACGAGTGGTTTGGATCACATTAATGATGCT 18679 46 100.0 30 .............................................. TAAAACTATCCACAAAAGCACAGGAGCTGA 18603 46 100.0 30 .............................................. ACGGCCACCTCAAAGCGATGGGGTTTGTAT 18527 46 100.0 30 .............................................. CGTGAGCTCCAATAGTCATATTGTTTTTTA 18451 46 100.0 29 .............................................. GCTAATTACTGCAATTGCTTACTTGTCTA 18376 46 100.0 30 .............................................. TTAAGAGCGGAATTGGAAAGATTAACTACA 18300 46 100.0 30 .............................................. TCCAATTCCAAAAAAAGTTCCAGTATCCCA 18224 46 100.0 30 .............................................. AACGGAAGCAGCGGTAAGTAAAGCAGCTGT 18148 46 100.0 29 .............................................. ATGTTAAACTTAAATAAACAAGCATAATG 18073 46 100.0 30 .............................................. AGTAATCCGGATTCAATTCATCCAGATACA 17997 46 100.0 30 .............................................. AATTAAACACACAAGAATTATCAGAGAACA 17921 46 100.0 30 .............................................. AGGAAGTGCTGCTTCTCATATCATTGCAAA 17845 46 100.0 30 .............................................. TAGTGCTTTTATAAACGATTGGCACACCCC 17769 46 100.0 30 .............................................. CAAACGCTTGTACCGCTTGTTTTGCATCTG 17693 46 100.0 30 .............................................. CATCGCCAAAAAGGGCTTTTAAATCGTATT 17617 46 100.0 30 .............................................. GAATCTGCTAAATTATGAAAGAAGTATTTA 17541 46 100.0 30 .............................................. AAAGGTATGAAAAATTTGGAAACTAATAAA 17465 46 100.0 30 .............................................. CAGCAGGACTGACATTACCAAGAGGAATGA 17389 46 100.0 30 .............................................. AAAGTACGCCTGAAACTTTGATTAAAGACC 17313 46 100.0 30 .............................................. GTCATTTTGCTAAAGTCTTTTTTCTCCACA 17237 46 100.0 30 .............................................. AGATAAACCCAAGCGCACTACTAAGTTACC 17161 46 100.0 30 .............................................. TAAAAGACGGTTACACGAAGAACGATATTG 17085 46 100.0 30 .............................................. GGATATGTATGGAGGAGTACAATGGCAAGT 17009 46 100.0 30 .............................................. ATAATTTCTTACGGACAATCACTTAGTACG 16933 46 100.0 30 .............................................. TATAAAAAATATATGTACATAGCATTAAAA 16857 46 100.0 30 .............................................. CGTATAAAACTGCAAGACGTAGAATTTACA 16781 46 100.0 30 .............................................. TTGTTGAGCTACTGTCCAACGGTCACCAAA 16705 46 100.0 29 .............................................. CTTACTACGAAAGTCAATTGCAATTCACA 16630 46 100.0 29 .............................................. CATTTCTTGCATTGAACGCCTATTAGCAT 16555 46 100.0 30 .............................................. GAAATAGGAATAGTTAATTTCCCATTGACA 16479 46 100.0 30 .............................................. TGATGGTGGCATTTGTGTAGCTTCTTGAGT 16403 46 100.0 30 .............................................. GATTGTACATTATCAACTCGCAATCTTTCT 16327 46 100.0 30 .............................................. ACAAGCTTTTAATTACATTGTCTAAGCTAG 16251 46 100.0 30 .............................................. ATATTGTGGTCTCCACGATTTCCAGCCACT 16175 46 100.0 30 .............................................. GGATTAACTTTTTTAGCTCCTGTAGCAGAT 16099 46 100.0 29 .............................................. TTATATATCAGATATGCAAGTGACCTTGG 16024 46 100.0 30 .............................................. AGCCGATATGTTGACCAATTTCAAAACTAA 15948 46 100.0 30 .............................................. CAATTCAAATTTGTAAACTTCAGAATGTTT 15872 46 100.0 30 .............................................. AATTTTAACTTTTTATATTTGTAGGAATTA 15796 46 100.0 30 .............................................. TTTGACAATGATTTGTACGAAGAACTTTTG 15720 46 100.0 29 .............................................. CTTCGTCTGGAGTAACGCCTATTGTTTTA 15645 46 100.0 30 .............................................. TTAATTTCTTATCTAATTCGTTAGCTGTTT 15569 46 100.0 30 .............................................. TAAGTGAACCGTCAGAATGTATTTCATTTA 15493 46 100.0 30 .............................................. TTTCGATTAATTACCCAATATTACAAGTAC 15417 46 100.0 30 .............................................. TTATGAAAAATTAGAAAACGGAACTGTTGG 15341 46 100.0 30 .............................................. ATTGTTGCAATTTGTATTTGCTTCATTAAA 15265 46 100.0 30 .............................................. AGTCTTTCTCATCACTGTCGTGATTGCATA 15189 46 100.0 30 .............................................. TTATATATTTGCTTTTATTAACAATGTTGT 15113 46 100.0 29 .............................................. ATAGCTCTCACCTTATTACACCGCAAATA 15038 46 100.0 30 .............................................. ATTTAATTAAGTACGGAAAACAAGCATTAG 14962 46 100.0 30 .............................................. AAGCTTGGGCGGAAGATAACGCACACGTTG 14886 46 100.0 30 .............................................. TAATTATGAGCGAATTAAAAACCGACCTCA 14810 46 100.0 30 .............................................. ATACAACTAACTAACCTATCTAAACCTATG 14734 46 100.0 0 .............................................. | ========== ====== ====== ====== ============================================== ============================== ================== 55 46 99.9 30 GTTGTGAATTGCTTTCAAAATTGTATTTTAGCTTATAATTCCCAAC # Left flank : CAGCAATCGCATCTGTTGCAGTAGTGGCATCAGCTTCAATTAGTACAGCTTCGGGTTGCGTTAGTTCACTTAAATCATCTTGAGTTGCAGTAGTAGCATTCAAGATTGTTTCGGTACCATTTCCATCTGCATCTACTTGATGTTGATCCAGGTTGTCATTCTTTTCTTCTAACATTTTTTTAAATGTATAAGGTTTCTAAATAATATTGAGTCCGAAAGGTAGTAAAGCCTTACCAAAATACAAAATATACAAGCCATTTAATTAATCATACAACAAATGATGTTTTTAATTAGGAGCTTTCTCCAGCTGTACGCTATATCTTTAGGATCCTGAAAAAAATCAGGATCCTAAAGGATGCCGCTTCCATCTGGGCTCATATCTTTGACATCGATTCAAAAACATGAATACTTATCTTTGAAATAGGAACAATTAATAAGTAAAACGAATCGACAAGTGTTGTGAGTTGCTTTATCTCACATCGATTTTATTTTTTATAGGT # Right flank : ATACCGCGATTCAATCGTTTGATATTTTGGTAGTTATGAGCTTATTTTGAAATCGAAAAGAAGTAGTGCTTCTTTGTTGTACTAAAGTGAGTTAGTCTTTTTTCTAATCCTGTTTATTAGAAAAGTTCTAATTGTTGAGAAGGTTTTTCGGGTTCTATTGGTTTTTTACCATAAAAAAGTTCCATCATTCCAAATTGTTTATCGGTTATTTGCATTACACCAATTTTTCCGTGTTCGGGTAAGTTGTTTTTTATTCGTTTGGTATGTACCTCTGCATTTTCTCTACTGGCACAAAAACGCATATAGATGGAAAATTGGAACATAGAAAAACCATCGTCTAATAATTTCTTTCTAAAAGTACTAGCAATTTTACGCTCTTTGCGTGTTTCGGTGGGCAGATCAAAAAATACTAATATCCACAAACTTCTATATTGGTTTAATCGGGTGTAGTGTTCCTCATACATAAACAGGGTATAAAATTTTCCTTGCTGTTCCTTCAA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGAATTGCTTTCAAAATTGTATTTTAGCTTATAATTCCCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:71.74%AT] # Reference repeat match prediction: R [matched GTTGTGAATTGCTTTCAAAATTGTATTTTAGCTTATAATTCCCAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-1.40,-2.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,4.87 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //