Array 1 1755-815 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_PVBA02000087.1 Klebsiella pneumoniae subsp. pneumoniae strain CRK0297 CRK0297_NODE_48.ctg_1, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence              	Spacer_Sequence                 	Insertion/Deletion
==========	======	======	======	=============================	================================	==================
      1754	    29	  96.6	    32	............T................	AGAGGACTGGCACGTCACGCCCTGCTGCGGAC	
      1693	    29	  93.1	    32	............TG...............	TTATCAATGGGGAAAAATCTTCATTTGTAACT	
      1632	    29	 100.0	    32	.............................	AATCCTGGAGCTGGAAAGGGAGCTTGCCTCGC	
      1571	    29	 100.0	    32	.............................	ATGGGCTGGCGCGACTCAAATGCCCGTTTGGC	
      1510	    28	  93.1	    32	.....-......T................	CGAGCGCTCTCCTGGTAAATCGGTAGCTCGGA	
      1450	    29	 100.0	    32	.............................	GAAAGTAGGGGCTACGCCGGAATTCCGAAGAG	
      1389	    29	  89.7	    32	A...........TG...............	TTACTTTTTGGCAGTTGGTAAAACACTTTTGC	
      1328	    29	  89.7	    32	............TGA..............	TTCCGGACTCCTGTTTCCGGCAGTGGATTAAA	
      1267	    29	  89.7	    32	............TGA..............	CACTACCAGATCCGAATGGACACCCGTAATGA	
      1206	    29	  96.6	    32	.............C...............	GAATGAGAGCAAAATAATGAAATTAACAGGAC	
      1145	    29	  93.1	    32	............TG...............	CTAATGAGCGGTATATTTTTTCTAATCTGAAA	
      1084	    29	  96.6	    31	.............T...............	TGACTTTTAAAAAAATCAGCTGAAACAGCCG 	
      1024	    28	  89.7	    32	.....-......TC...............	TGCGTGCAGTAAACGAAAATACATCGGTCAAT	
       964	    28	  89.7	    32	.....-......TG...............	TAAAAGCGTTTTACATGCATTCAAAAAAGTTA	
       904	    29	  93.1	    32	............TC...............	GGCATGAGCGAGAACCACTGCGAGAGTGTGGT	
       843	    29	  75.9	     0	..........A............ACCTTC	|                               	
==========	======	======	======	=============================	================================	==================
        16	    29	  92.9	    32	GTATTCCCCCCGCATGCGGGGGTTATCGG	                                	       

# Left flank :   GATAAAGACACCAAAGCTGAGCTTCAAATCAAAGTACGGGAGCTCGATGAAAAAATTCAGGCCCGCAAAGATCAGAAGCAGGAATCTCGCGAGTCAATTCGCCGCCCGATTGACCCGTATGAAGCGTTTATCACCGGCGCAGAACTCAGCCATCGCATGAGTATTAAAAATGCGACTGATGAGGAAGCAGGGCTTTTCATTTCTGCATTAATCCGCTTTGCAGCCGAACCACGTTTTGGCGGTCATGCGAATCATAACTGCGGTCTGGTGGAGGCTCACTGGACAGTTACGACCTGGAAGCCGGGTGAACTGGTACCAGTTACACTTGGAGAAATCGTCATCACACCGAATGGTGTTGAGATTACCGGGGACGAGTTGTTTGCTATGGTAAAGGCATTCAATGAAAATCAATCTTTTGATTTCACTGCCCGCTAACTCCAAAAGCTGGTGGATTTTAGTGGCGCTATTTAATATTTTATAATCAACCGGTTATTTTTAGA
# Right flank :  ACAAAGTCACAACAACAGTCAGCAAAAACCACGCGATGATCGTTATTGAGGATTTGAAGGTTTCCAGCATGTCAAAATCTGCAGCGGGTACGGTAGATGAGCCGGGGCGCAACGTTGCGGCAAAATCAGGTCTTAACCGGGCGATACTGGATCAGGGCTGGTACGAAATGCGCCGCCAGCTCGAATATAAGCAGCGCTGGCGTGGCGGGGAAGTGCTGGCAGTAAATCCGGCCTACACCAGCCTGAAATGCGCCTGCTGTGGTCATACCGCGAAGGAAAACCGTCAATCGCAGGCAGTATTTGTCTGCGTGGCGTGTGGTTACGAAGCGAATGCTGATGTAAACGGCGCGTGTAATATTTTAGCGGCAGGACATGCCGTACTTGCCTGCGGAGGGACGGTGCAGTCAGTCCGCCCGATGAAGCAGGAACCTGGCACTGAGCGATCAGTCGTCACCCACTAATAATGGGAATCCCCCTCCTGAATCTCGCAGCGTGAAGGT

# Questionable array : NO	 Score: 5.27
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.70, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.31,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTATTCCCCCCGCATGCGGGGGTTATCGG
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     F [7,3] Score: 0.37/0.37
# 	Reference repeat match prediction:         R [matched GTATTCCCCCCGTGTGCGGGGGTTATCGG with 94% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-12.70,-12.10] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [11-5] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: R [40.0-70.0]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.74,5.18   Confidence: HIGH] 

# Array family : I-E [Matched known repeat from this family],   
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