Array 1 1064897-1068031 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP057459.1 Klebsiella pneumoniae strain RHB26-C08 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 1064897 29 100.0 30 ............................. CTCACGCTGATACCTCGGAAAAAGACGGGC 1064956 29 96.6 32 .G........................... GCGGGCTGGGTTTTGTCGACTCTGCCGATCCG 1065017 29 100.0 32 ............................. TAATATTGATAAATTCGATGAAGTAACCGGAA 1065078 29 96.6 32 ............................A TCGAAGTACCAGCGCCGCACCGTGTTTTTTGC 1065139 29 100.0 32 ............................. GTGGCCGGTGCTGCCAGTACGGTTACCGAAGT 1065200 29 100.0 32 ............................. CATCCACGCTTCTGGCCACCAGGCAGATAATC 1065261 29 100.0 32 ............................. GTGCTCCTCTTCCAGATACTGGGCCAGGAGCT 1065322 29 100.0 32 ............................. TACAGGACGACAGCATCCTGGAACATTTCGAC 1065383 29 100.0 32 ............................. CTCTGCGTGTGCGCCTCCGCTACGAGGTGACG 1065444 29 100.0 32 ............................. TGAATATTCATTTACTAAATTAGAGACAATTC 1065505 29 100.0 32 ............................. CGGATTAAACGTAAGGCCGCGCGCTGGCGTAA 1065566 29 100.0 32 ............................. GTGGTTTGTTACCGTGTTGTGTGGCAAAAAGC 1065627 29 96.6 32 A............................ GAACGGAGGAATATAAGAACAAAAGCCCGCAG 1065688 29 100.0 32 ............................. TAAACCGCTGGCGTGGTCAGTTGCGTGGCGGT 1065749 29 100.0 32 ............................. GGCGCCGGCCTGATCACTATCGGGTAACGGTG 1065810 29 100.0 32 ............................. GGCCTGAACCAGAGCATGATCTACACCTGGAA 1065871 29 100.0 32 ............................. CGATAACCGGGCGTTTCGACTGAACTCACCTC 1065932 29 100.0 32 ............................. TTAATACCAGGGGGCAGGTTCAGCAGGTCCCC 1065993 29 100.0 32 ............................. CCGCTTTAACCCGCTCCGGCAGATCCGGGTGA 1066054 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT 1066115 29 100.0 32 ............................. CCCCCGGCCGCGTGGCCGATTGCCATTACCGC 1066176 29 100.0 32 ............................. TATACAGTATTATCATAGCGAATTCCCATCGG 1066237 29 100.0 32 ............................. GTTGGTAATTACTGCTGTGTGTTACGGATAAA 1066298 29 100.0 32 ............................. GCACCAACGTTTACGGTGCGGTGGTGAAACAA 1066359 29 100.0 32 ............................. TGCCGGACGTTGTACCTGTGAGTTAATTCTTC 1066420 29 100.0 32 ............................. CGATAACCGGGCGTTTCGACTGAACTCACCTC 1066481 29 100.0 32 ............................. TTAATACCAGGGGGCAGGTTCAGCAGGTCCCC 1066542 29 100.0 32 ............................. CCGCTTTAACCCGCTCCGGCAGATCCGGGTGA 1066603 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT 1066664 29 100.0 32 ............................. TGGGTAGAGGTTAACTGGTTATTGGTCATTGA 1066725 29 96.6 32 ........T.................... ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 1066786 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 1066847 29 100.0 32 ............................. CTGCAGGTAAATGACTGGATGGGGGAAGAGGT 1066908 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 1066969 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 1067030 29 100.0 32 ............................. GCAATCCCAGAGCGCGAATATCTTGGGCTCTC 1067091 29 100.0 32 ............................. GACATGGCGCGCGAGTTTATCGACGCCTGCGC 1067152 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 1067213 29 100.0 32 ............................. TCCCCTACCACCCACTGAGCAAACTGGTAGCA 1067274 29 100.0 32 ............................. CAGATACCAACGGTTACTACGGCAATCAGCAC 1067335 29 100.0 32 ............................. AAGGTTGACCTGTTGTCGGCAACCATCGAGCC 1067396 29 96.6 32 .........A................... GAGGCGCGCGTTGTCGTCGGTGAGATGCGCGA 1067457 29 96.6 32 .....A....................... GCCATTCGTGCTTCTTCGCTTTGCTGCATCCA 1067518 29 100.0 32 ............................. GAATATAAAACCAGATTCCATATAGCCCTGTG 1067579 29 100.0 32 ............................. CCGGTTACGGGGATGACTGCAATTCGCTCCTG 1067640 29 100.0 32 ............................. GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA 1067701 29 100.0 32 ............................. GCGGCGTCAGGTGTGTGGCAGAAAATTATTGC 1067762 29 100.0 32 ............................. TCGTCTGAGTTCCGGCTTACGCCGTGCCGACA 1067823 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 1067884 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 1067945 29 96.6 29 ............T................ GGGTTCACTTGGGTGAAACTGAACTAACT 1068003 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================ ================== 52 29 99.1 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : AGGTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTA # Right flank : CGTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGATTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATT # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [3-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [78.3-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //