Array 1 179983-182598 **** Predicted by CRISPRDetect 2.4 *** >NZ_MSZE01000014.1 Klebsiella pneumoniae strain C13-E9-15 NA-C13_S93_R1__paired__contig_14, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 179983 29 100.0 32 ............................. GAGCAGGCACCCGCCGCAACGACGAAGAGCGC 180044 29 100.0 32 ............................. AAATCAGCCAGCACCACGATTCTGGGAAATTT 180105 29 100.0 0 ............................. - Deletion [180134] 180134 27 93.1 33 --........................... GAAACCCCATCAGATGACCCTCCCCATGTTGGC 180194 29 100.0 32 ............................. TTGCCTGGTCTGCTTGGTGATGATCCGTGGTA 180255 29 100.0 32 ............................. TACAGAACGACTGAGGCGGCGTGTATTGCATA 180316 29 100.0 32 ............................. GATCTTAACTCTATTGCCAATGGCGCAATTCA 180377 29 100.0 32 ............................. GGCGATGCGCGCTCTGCTGGCTATCGGTAAAA 180438 29 100.0 32 ............................. AATGCAGCAACCGGCAAATATATCGCCGGTAA 180499 29 100.0 32 ............................. GGGCTGCCGCACGCCTGGGACGAGTCGAGCCC 180560 29 100.0 32 ............................. CCGCAATAACAAAAATAAATGAGGGTTAAAGT 180621 29 100.0 32 ............................. GTAAATGGGAATGAGTAGAAGAGCGTCATTGG 180682 29 100.0 32 ............................. CCCCCGCGCACATGCTTAAACGCGCTATCACG 180743 29 100.0 32 ............................. GGCATCTGTTGTGTAATGTTGAGTTTTTTTCA 180804 29 100.0 32 ............................. CAGGTTAAACATGTAAAAAATGACCGTCGCCG 180865 29 100.0 32 ............................. CACATTGCCCGGTCTGAAAAGTATTTGAAAAT 180926 29 100.0 32 ............................. TCCGCACAGTCAAACGCTCCAGACACCAACCC 180987 29 100.0 32 ............................. CCGGAACACCACCAGTAACAGCTACTGTAGGC 181048 29 100.0 32 ............................. TGACCCTGTTGATTTTGTTCCAGGTAATACGT 181109 29 100.0 32 ............................. TTAACCTCGTCGTTCTGGTTTCCGCCCAGGAT 181170 29 100.0 32 ............................. GAACCTGAATTCGAAGGGTGGGTCATCCTTCC 181231 29 100.0 32 ............................. GGACCCCGAGCGACCCGGTCACCCTCCGACCT 181292 29 100.0 32 ............................. CCGTCGAACGGCGGTTATATCCATCTTGAGTC 181353 29 100.0 32 ............................. ACCGATCCCACAATTGCGGCGGTTGAGATTGA 181414 29 100.0 32 ............................. GTTGGTAATTACTGCTGTGTGTTACGGATAAA 181475 29 100.0 32 ............................. CCGATTGTCTGGCGGTCGAGCGCCATTTGCTC 181536 29 100.0 32 ............................. TGCCGGACGTTGTACCTGTGAGTTAATTCTTC 181597 29 100.0 32 ............................. CGATAACCGGGCGTTTCGACTGAACTCACCTC 181658 29 100.0 32 ............................. TTAATACCAGGGGGCAGGTTCAGCAGGTCCCC 181719 29 100.0 32 ............................. CCGCTTTAACCCGCTCCGGCAGATCCGGGTGA 181780 29 100.0 32 ............................. CCCTCCGCTTTCAGGGTGTGGCTGATATCACC 181841 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT 181902 29 96.6 32 .............A............... TGGGTAGAGGTTAACTGGTTATTGGTCATTGA 181963 29 100.0 32 ............................. ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 182024 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 182085 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 182146 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 182207 29 100.0 32 ............................. GCAATCCCAGAGCGCGAATATCTTGGGCTCTC 182268 29 100.0 32 ............................. GACATGGCGCGCGAGTTTATCGACGCCTGCGC 182329 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 182390 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 182451 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 182512 29 100.0 29 ............................. GGGTTCACTTGGGTGAAACTGAACTAACT 182570 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================= ================== 44 29 99.2 31 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCCTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT # Right flank : CGTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATT # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:-0.05, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //