Array 1 82076-82577 **** Predicted by CRISPRDetect 2.4 *** >NZ_CYZE01000021.1 Hungatella hathewayi strain 2789STDY5608850, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= =================================== ================== 82076 33 100.0 34 ................................. CTGAATTTATATGGTCACCAGCTCCAACATATCC 82143 33 100.0 35 ................................. TAACATATTTACTCCTGCCTTGCATCCGGATGCGC 82211 33 100.0 34 ................................. TTACTATCACAGCGTTTTCTGACCGATTAAGTTT 82278 33 100.0 35 ................................. AAAAGCAGATGTGGCCTACTTTGCAAAAGGGTGGC 82346 33 100.0 33 ................................. TCTTTGTCCTGCGACACAGCGTTGATGTACAGG 82412 33 100.0 34 ................................. TCCATTAACCCGTGCCAGTACTGTTGGCTGCTCC 82479 33 97.0 33 .................C............... GCCAGTAAATTGTTTCAGCCATTTTGTCAGGTA 82545 33 72.7 0 ...C....T.....T..CCA.A..TC....... | ========== ====== ====== ====== ================================= =================================== ================== 8 33 96.2 34 GTCACCTTCTGTGAGGAAGGTGTGGATTGAAAT # Left flank : ACGATAAGGAGTACAGAAAGGCGTTGAATATCTGCGGAACAAAGTCCGGGCGCGACTGCGACAAGGTGAAGGAGGCAGGCCTGACCCCCTGTTTTATTGACGGTACCACAGCATTCGAGGAAGCGAATATGATTTTTGTCCTGCGGAAACTGTACTCCGATCCCATGCCAGCTGAAAATTTCCTGGATAAGGAAATTGATCAGAAATGTTATCCGAATAAAGACTATCATACGATGTATGTGTCGGAGATTGTGAAAGTGCTTGTGGCAGATTGCCAGGCTGACTAATTGTGAAGGGATTTCGTCTTAGATAAAAGTCAGATAAGAGGGTAGTAAGCTGGTGCGAATCTGAAGTAAGCATGAAAATACCGGGGGATTCGCACCGGGAAAATGAGAGAATAGGTAGAAGAAGGAAGATCGCTATTGATTTTGTTGGAGAATATTGTACAATATAGTTAATGATAGGGGGCGGGAGTGGCGGAGTTGTTGTGGAGAATTGCT # Right flank : TAACCATCTCCCCCCTTCCAACCTCTCATCACAACAAAAAGAACCTTCAGAAAGCAAATGCTTCTAAAGGTTCTCTTTTTCTGATGACAATATCCTCTCTAATCTCCAAGATAATAAACCGCCGTAAAATACCCCTTACTATTATAATAAAGCGCATTCCCAAGTACGCTGCTGTCAGCCAGCGCCTCTGTCTCCCCGCCGCTCTCCGGTGCACCAGCACAGATATCAGTCTGAGTTTTCGATGCTTCTGCCAGGCTGGTATAAGCGCCTGTCACGGCTCCTTTCAGAATGTAAATGTCCCCCTCATATACCGTCTTCATCACAGTGTCTGCGCTGGTCTGCCACAAAGTATAGGTTCCATTTTCCAGATCTGCGATGACTCCTGTTTCACTGCCTTGTGAGGAAGGCGTTGTTCCCTTGTCATACATCAGATAGCCGTATGAATTCGAGTCCCCTGCGTTGAGATCCAGGGAAAGTAGTTGGCTCTCGCCGGTCAGCGC # Questionable array : NO Score: 6.07 # Score Detail : 1:0, 2:0, 3:3, 4:0.81, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACCTTCTGTGAGGAAGGTGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:54.55%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-4.20,-1.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [55.0-55.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : NA // Array 1 68586-69156 **** Predicted by CRISPRDetect 2.4 *** >NZ_CYZE01000009.1 Hungatella hathewayi strain 2789STDY5608850, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= =================================== ================== 68586 33 97.0 34 .......C......................... GCAAAGGCAATAGGAACGCAGTCGAACCTATACC 68653 33 97.0 33 .......C......................... CTCATCGTACTCAGGCGATGACGGATCATACAG 68719 33 100.0 35 ................................. CATATCCATTGGGGAGGCGTTTTACGCCACGAGAT 68787 33 100.0 35 ................................. TTCCTCACGGATTCGAGTTCCACATTCAATGCACG 68855 33 97.0 34 .....................A........... CCTTTCCCATATTACATATGGTGCATTATCTTCT 68922 33 100.0 33 ................................. ACGCCACAGTTTGTTATATAGGTCTCCGAAAGC 68988 33 93.9 35 .......C.............A........... TCGCTGGTACTTAATCATGGCATCGTAGTATGCAG 69056 33 81.8 35 ....T..CC......AT.A.............. ACACCTGCAGCCATGAACATCTCAGTTTTGTAGAT 69124 33 72.7 0 ..T....CC....C....A.T...C...T...A | ========== ====== ====== ====== ================================= =================================== ================== 9 33 93.3 34 GTCTCCGTTAGCGATGGCGGAGTGGATTGAAAT # Left flank : TCCGCCATTTTTCTGGAAGTAGGAGGCGTTTCTCTATGCTGGTGCTGATCACCTATGATGTAAATACCGAGACCGCTGCGGGAAAGACGAGATTGCGTAAGGTCGCAAAGCAATGCGTAAACTATGGTACCAGGGTACAAAATTCGGTATTCGAATGTATTGTGGATAACGCCCAGTGTGTGATGTTAAAAGCGGCGTTGAAGGACCTGATTGATGTTCGTGTTGACAGCTTGAGGTTTTATTATCTGGGCAACAAACATGACACGAAGGTGGAACATTTTGGTGTCGAAAAAGGTGTAAATGTAGAAAAACCTCTCATTTTCTAGCCTGTGAATTACGGTGCGAACCAGAAGTGATCATAAAATCCCTGGGAGGTTCGCACCGAGAATTTTGCGGCTATGGAGGGGAAATGGGAGGATTGGATGAGTTGATTCGATGAAATGTGTGCAAATTGCATATGATTATTGCTGATTGTATGGTGTAATATGTGCGAGTTTGCT # Right flank : ATCGTAAGATTATTGCAAATATGAACCGTTGAGGGGACTACATCAGTAATGTCAGAGTGTATTAGATTTACGCAAAAAATCAGTTCTCAGACGATAAAAGTAAATAAATAGATTGAGGAGAGCAAAGAGTGAAGTATATTTTTATACATGGACTTGGACAGGGGCCAGATAGTTGGAATAAAACAGTTTCCTGCATGAGAGAGCAGGAAGAGATTCAATGTCTGAACGTATTTGCATTTAAAGAGGGATCAGAGATTTCATATAGAAGAGTATATAAGGCTTTTTCGGCGTACTGTGAGTCTATAAAAACGGAGTTTGGGCTTTGTGGTCTTTCTTTGGGCGCTGTGATTGCGTTAAATTATGTAATGGAGCATCCGGGAAAGGTAAAGTCACTGGTCTTGATAGGGGGACAGTGCGTGATGCCGAATGGGCTTTTAAGATTGCAGAATATGATATTTCGGTTTATGCCGAATGGGATTTTTAAGAAAATGGGGATAGGT # Questionable array : NO Score: 5.51 # Score Detail : 1:0, 2:0, 3:3, 4:0.66, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.59, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCCGTTAGCGATGGCGGAGTGGATTGAAAT # Alternate repeat : GTCTCCGCTAGCGATGGCGGAGTGGATTGAAAT # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [7,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.40,-0.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-17] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : NA //