Array 1 108833-112081 **** Predicted by CRISPRDetect 2.4 *** >NZ_RKQT01000001.1 Frederiksenia canicola strain DSM 25797 Ga0244696_101, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ==================================== ================== 108833 33 97.0 35 ................................G TTTTGAAAGCTGCATAAAATGCACCGCTTGCACAG 108901 33 97.0 34 ................................T ATATCGGTGCTAAGTCAGTTAGAGTAGTACGTAA 108968 33 100.0 33 ................................. CTATCCACATACATGCGCAACCATCTATCGTAC 109034 33 97.0 33 ................................G TAATCGTCGTTAGCGATTTCAAAACCAGATACT 109100 33 100.0 33 ................................. TGAAATACGCTACGCTTAAACTCAATTTTGCGT 109166 33 100.0 34 ................................. TCGTGGTATCTAATAGACAGCTCCGTTTATTGTC 109233 33 97.0 35 ................................T GGCGATATGCACTTAGGACATACGGCTATTCTAGG 109301 33 100.0 34 ................................. AATGACTGTAGTTTATCCTCAATGTGGTCAACTA 109368 33 97.0 32 ................................C AATGCCAAAGATATTCAGATGTTCGGTCAGGT 109433 33 97.0 34 ................................C AATCGACATACAAAAGGTGTGTCATAAAACAGAT 109500 33 97.0 33 ................................G ATCTATTTTTCTCGATCGATTTATTTTTTTTCT 109566 33 100.0 33 ................................. TTCGTGATCCCCCCGATTACGTCCTCGACCATA 109632 33 100.0 35 ................................. CCTAAGCTCAAAAAATCTCGCCCCTCATTTGCACC 109700 33 97.0 35 ................................T CAGCAGAGATGATGTCACCTATGCGTTGAGTAAAC 109768 33 97.0 36 ................................T CGGTAATTGGTACTACCAGAATCTCATGGAACGGAT 109837 33 97.0 35 ................................G TTTATACTGGTGTACGTAGATGATATCAGGTTTGA 109905 33 100.0 34 ................................. TCATCAGAAGTTTGCTGATAGACATGGTGCACCT 109972 33 97.0 33 ................................C ATACAGCAATGGCACGAAATACAGATGCCATAT 110038 33 97.0 33 ................................T TCCTACGCTCTGAGCAAATCAAAGCTAACTGCC 110104 33 97.0 34 ................................C CTTCACTAATCAAAATCTGTTGCGTGCGGAAAAC 110171 33 100.0 34 ................................. TTTTTACGTTTTAGGCTGATGCAAGTACCTCCTT 110238 33 100.0 33 ................................. CGATAAGCACTCTCTAATGAAGTAAGAGTCTGG 110304 33 97.0 36 ................................T GCTGTATTTGAAGAAGACCTAACCCAACCACTGCAG 110373 33 97.0 35 ................................T TGTTGCAAAATGCAACGAACCTCACGCTAAAGGCG 110441 33 97.0 35 ................................C CAACATACTGACTGATGTTGTCTTTCGTGAGTAAG 110509 33 100.0 33 ................................. TTTAGGAATATATTTCCTTTATTTTTTTAAGAA 110575 33 97.0 33 ................................G CGATGCGGGGCGGCACTCGCTCAAAAATAGAAG 110641 33 100.0 35 ................................. TCGATCAGCTCTTCGGTGGCATCCATCACTAACGC 110709 33 100.0 34 ................................. ACTAATCACTGAAAACAAGGCTATTTTACTATGG 110776 33 97.0 34 ................................T CGATTTATATGCAAGACAAATCAATGTTTGATGC 110843 33 100.0 35 ................................. ATCTCTAATAGCACAAAGGAACACCCTTATTGGTG 110911 33 97.0 33 ................................T AGCTCATTGACTGCCTTTTTCGCATAACTCAAT 110977 33 97.0 33 ................................T CCTTTTGTGTGATTTGGGTAAATCATACGGCAA 111043 33 100.0 35 ................................. ATCTCTAATAGCACAAAGGAACACCCTTATTGGTG 111111 33 97.0 33 ................................T CGACACAGATCACAAAAATAGAGTTTGGTGGTG 111177 33 97.0 33 ................................C CAAAGAAAAAAAATCATTTGAGTTAAGTGAAGA 111243 33 100.0 35 ................................. AGTAAAGGGCGTAGAGCAAATAGTCCAAGCTCTGC 111311 33 97.0 34 ................................G CTTGATGGCGATCGGCAAAATTGCTGACCGCTCC 111378 33 97.0 36 ................................C ACAAGGTAGATAAATCAACTCACTATCCTGATAGCG 111447 33 100.0 33 ................................. GACTGGTAAAAAGCTTTGCGATCCATTGGCGAC 111513 33 97.0 33 ................................T ACGTTAATCAGCTTAATATCTTCGGGGTGGTAG 111579 33 100.0 33 ................................. TGCCCACCACTCTGAAGTTTTCACTCTGATAGT 111645 33 100.0 33 ................................. CGAGAAAAGTGATGTTATCCATTTTGCATGAGC 111711 33 97.0 34 ................................C AAGGCTTCAAAGGCAAAGTAATAGGTTGCCCCAA 111778 33 100.0 33 ................................. ACCACTGCCCCTGTTCGCACCCGAGCGGGGCTA 111844 33 97.0 34 ................................G ACCGACAAAGCTAATCTGTCGGCATTATTAGATC 111911 33 97.0 36 ................................G TCATATTTCTATCCCCCCTTTTAACATTGAAAATAT 111980 33 97.0 36 ................................C AAAATCGCATCTAGCAACGCATTCGGAATGGCAGTA 112049 33 66.7 0 ...........AATC.A....G.A.C.G..T.T | ========== ====== ====== ====== ================================= ==================================== ================== 49 33 97.5 34 CCAGCCACCTACGCGTGGCTGTGTGTTTAAACA # Left flank : TTAGGGAGAGAATGATGCTGATGTTGATAACCTATGACATTTCACTTGATGATCCTGAAGGTGCTGCACGCTTACGTCGTATTGCCAAACATTGCCTTGATTACGGTGTACGCGTACAATATTCCGTCTTTGAGTGCGATATCGCCCCCGATCAGTGGGTGAGACTCAAAGCAAAGCTTCTACAAACTTATAATCCAGAAACCGATAGCTTACGTTTCTATCATCTTGGCAGTAAATGGCGACGTAAAGTAGAACATCACGGAGCCAAAGCATCTCTCGATATTTTTCAAGACACACTTATTCTTTAACTCGCTAACCTATAGTTCTCATTCAAATGCCACGAGATTAGCGAACGAAAATAGTTCTTTAAAAATTAGGATGTTATGAAATTTTAGAAAGGGATATATTAGATATGATATACTCTTTTTTGTCATCATTGATGAGAGTTAGCGAATGATATAGCTTACAGCCTTGTTCAATAAACTCTCAGCAATGAGTGG # Right flank : TTATGAGGAGAGTAGAAAGGCTGTTCCCTCGATCAAGTTAGCTTGAAACTCAATTTTCTAGGGAACAGATTATATTTGGGAGGAGTATTTTGCCGAAGCTACTTCACTGTTACTCGTGCAAATTTGCGCTTACCCACTTGGTAAACTGCGGTGGTGCCTGCTTGGATCACTAATTTTGAATCTTCAACTTTCTCGCCATCAATTTTCACACCGCCTTGATTGACAGAGCGGATCGCTTCAGAAGTTGACGCTACCAAACCCGCTTCTTTGAGCAAGTTCGCCAAGCCGATTTCGCCTTCAAAGGTAAATTCAGGCATTTCGTCTGGCATCGCACCTTTTTGGAAGCGGTTGATAAATTCTTGCTCTGCCGCATCGGCATCAGCTTCGCTGTGGAAACGAGCAATGATCTCTTTGGCTAACAGAATTTTTACATCTCGTGGGTTTTTGCCGTTTGCTACGTCGGCTTTGAATTGAGCGATTTCATCAAGCGGTCGGAATGA # Questionable array : NO Score: 5.66 # Score Detail : 1:0, 2:3, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.52, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCAGCCACCTACGCGTGGCTGTGTGTTTAAACA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GCAGCCACCTTCGGGTGGCTGTGTGTTGAAACA with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.50,-2.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [60.0-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //