Array 1 33299-33046 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_AKOT01000004.1 Helicobacter pylori Hp A-14 HpA_14.contig.3_1, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence             	Spacer_Sequence                 	Insertion/Deletion
==========	======	======	======	============================	================================	==================
     33298	    28	  89.3	    26	......A..A.....G............	GTGTCGTTATCAAAGCTAGCGTTGCC      	
     33244	    28	 100.0	    26	............................	GTGTCGTTATCAAAGCTAGCGTTGCC      	
     33190	    28	 100.0	    29	............................	GCGCTGTTATTAAAAGCAGATTGGACGCT   	
     33133	    28	  92.9	    32	........GA..................	CTACTATTACCAAAGCTTAAAGTGGCGCTGTT	
     33073	    28	  82.1	     0	.C....A..A.....G...........G	|                               	
==========	======	======	======	============================	================================	==================
         5	    28	  92.9	    28	ATTAAAGTTGTAAGTCCCTTGATTGAAA	                                	       

# Left flank :   TCTAAACCTTGAGCGTCTTTAGCGACAGTAGTATTTTTGCTTTGAGTGTAGCTTGTATCATTGCTTGCGATCTTATTATCACTAGCAGCGTTATTTAAAGCGCTTTGGGAGTTACTCAAGTCTTGTTGGTAGGTTTTTTGGGCTTGTTGTTGTAAATCATCGCCTAAAAATTGGGTAATAATGGATTGGTTGTTAAAGGTTTCTTGTAAGGTTTCATCTTGCCCATTAATATCAAAGGTTACATCATAAGTGTTATTGCCCACTTCAACATGGCTAATGGCTTTATCGCCCTTATAGTTGATTAGATCCCACAAATAGCTTTGATAAACCCCATACTGGATCGCCCCGTTTGTAGTGAGAATGTCATAGGTTTGATTATTATTAAGGGTTTGATTGAGATTAAAAATCGCATTAGAATTAAAAGACACACTGCCTTTAAGGCTGGCAAAAGGCGAACTTGAATTTAAAGTGTTAATGCCTGAGAAACTCACCTTGCTAGT
# Right flank :  CTCGTTTGATTAAAGGAGATAGCGCTATTATTGTTATTACCGCTGAAACTAAAGCCCCCATCAGTATCATCTTTAAAGCTAGAGCCACTGACCTTGATATTAGAGCCTTTAAAATTCATGTAAGATTTTTGCGTCCCTGCATCGCTGTTATCCAAACTCGCTTGATTGATAGTGATATTGTTAGTTGCATTAAAATTGAGCGTGGCCCCACCGCCATCAGAATAGGAGTTTCCGGTTGTTAAATTATTGGTCAAGTAAATATTAGCCGCATCATAAGTGCCTGTGATATAGCCTACATCACCTCCATTAATACCTGTGCCTCCAAAGCGGATATTCCCCCCTATATCAAGCGTGCCACCATTGAATTTTTGCGTGAAACTAGCCCCACCAGCACTATAAGTGGTAAGAGTGTTTAAATAATAAGTCCCAGAGCCTTGAGTGCTACTAAAAAGACAATAGGAGTTGTGCGTGGGTGAATTAGGACCGCTTTCAATATTGTC

# Questionable array : NO	 Score: 5.29
# 	Score Detail : 1:0, 2:0, 3:3, 4:0.65, 5:0, 6:0.25, 7:-0.13, 8:0.6, 9:0.92,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     ATTAAAGTTGTAAGTCCCTTGATTGAAA
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         R Score: 4.5/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:71.43%AT]
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  NA [0.00,0.00] Score: 0/0.37
# 	Array degeneracy analysis prediction:      R [7-3] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [60.0-58.3]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0,4.91   Confidence: HIGH] 

# Array family : NA
//