Array 1 211821-211525 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACJIP010000002.1 Fontibacillus solani strain CECT 8693 Ga0372433_02, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 211820 32 100.0 34 ................................ AGCATCAAATGCCGCTGCTTCCTGTCATGAGACG 211754 32 100.0 33 ................................ TATTTGCCTTTGCCGAAGTAATTGAACTACTAC 211689 32 100.0 35 ................................ AGAGCTAGACGCCGCGCACGAAACTGCTCTATACA 211622 32 100.0 35 ................................ GGTTTGGAGATGTAGCCTATGAGTTTCTTGCTTCC 211555 31 90.6 0 .............-......A..A........ | ========== ====== ====== ====== ================================ =================================== ================== 5 32 98.1 34 GTCGCTCCTTATGTAGGAGCGTGGATTGAAAT # Left flank : ATTTAAAATGGGCAATATTATACAGCGAAACAGTATATAGTGATAATATTTGTCATGAAGTACAATAGCAGTATCTTTTCTAATGTAAATAGGTACATAGACACAAATAAAATGAGACGCCATGAGATTCTATTAAATATGTGATTTTTGTGGAAATTTATCTGAGAAAACAAGTTTAGCGTCACGAATTACTGGATCAGAGCGCCGCCTGTATATTCTTGCGCCAGGTGAGGAGTTTGTGTTGCGAGGATAGTTGTGGATTCAATAATACTTTGCCTTTCGTTACCAGACTATAATGAGCAGGAATCCAATGCATAGTGACAAAATAATATGGTGCGAACCTCAAGCGCACATGATTTTCCTGGGGGATTCGCACCCCATCTCTGGTGCGGCTTTATGGGATTTTCCTAATAGATTTTTACTGTTTATGAGCTGTAATATTAAGATTCCCACTAAAGCGTTTGCAAATCTTTGCTTTACAAGGGCTAAAATCGCCCGGA # Right flank : ACTTACCGTGCAATTGATTTTATACAAAGAGATCATATTGCATAGAACAAGCCGAGGCGAATTGATACGCTCTGGGCTGTTTTATTATGGGTGAAATTTTTATTTCTAATCCCTACTTGACTAGGTGGAATTATTGGAATATAGTATAAAAAAGCTTAAACAGGTTTACTAATCACAACCTAAATAAAGACATACAGATGAATAATATGGATACATTAGGGTGTAAATATATCCCATTCCAATAATTGTATACAATTATACAAATATATAGTTAGGCTTGTAGCCACACATTATCGATAAGGAGCAATAAATGGTGATACGATCGCGGAGGTTGTCAAAGGATAATACCTACTATGCATTAAAACAAAAAATTATTGATAGTGAGTTAGAGCCGAATCAACCTGTGCATGAAGAAAAATTGGCGGCGTTGCTCGGAGTCAGTCGTACTCCGCTAAGAGAAGCCATACAGCGATTGGAGAACGAGAATTTTCTCGTTAGAC # Questionable array : NO Score: 8.96 # Score Detail : 1:0, 2:3, 3:3, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCTTATGTAGGAGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: R [matched GTCGCACCTTATATAGGTGCGTGGATTGAAAT with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.80,-3.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [61.7-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.78 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 13004-11652 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACJIP010000001.1 Fontibacillus solani strain CECT 8693 Ga0372433_01, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ========================================== ================== 13003 30 100.0 36 .............................. TAGAATAGTCGAAACCGCTTATGCGGTCAGCAGGAA 12937 30 100.0 36 .............................. CAGCTAAATATTGGAGCGCAAGCAAGAGCGGTCGCG 12871 30 100.0 37 .............................. TCGGTACAACATCCATAAAGCCTGTAGGCTGCAACAC 12804 30 100.0 36 .............................. TAAGTTTTTGTCGGAGTTATTTGTCTCAAAATACCA 12738 30 100.0 35 .............................. ATTGCTTGCGCGACTCCAATAGCTGCCTGTTGCTT 12673 30 100.0 42 .............................. AAGAATATGAAAAAATGGTGATGATCGGCGGATTGGTTCCAA 12601 30 100.0 36 .............................. TAGTTTGTACTAACTGCATCATGATTTGAGTTCGAT 12535 30 100.0 36 .............................. GAGTAGTCAATGCCTACGGTTCTAGCTCCTGGAGCT 12469 30 100.0 36 .............................. AAGATTTGAACTCGTCAGTAATCTGAGCAGCCTTTA 12403 30 100.0 36 .............................. TGGATTGTCCCTCCTAAGCAGATTTTTTAATAGGCT 12337 30 100.0 36 .............................. TGTTTTCTAACTAGTGTACCGCTTACAGGTTGAGAC 12271 30 100.0 35 .............................. TAAATAATTGGCTGCTGCTCAATCACCTGATAGAC 12206 30 100.0 35 .............................. GAATAACCCTGTCAATGCGAGGCTGATTTGTTGCA 12141 30 100.0 35 .............................. GTTACAATTGCTTCGTCAGAAACCTCTTGAACATT 12076 30 100.0 37 .............................. TTGGGGCATACTTCATTACGGGGTTGATGTCTGTCAA 12009 30 100.0 34 .............................. ACATGGTAGATAGTCACGGCGTTACGGCTACCGA 11945 30 100.0 35 .............................. CCGACTCGATATTGCTATGACATTGCAAAGGCAAG 11880 30 100.0 37 .............................. CCAATTTTATTTAAGATAGTTGGAAAAATGGTATTCG 11813 30 100.0 36 .............................. AAGTCCTCCATCTACTTACCGCCTCCCGTCGTTACA 11747 30 96.7 36 ......T....................... TAAGTGTCTTCAACCAGGTCAACGATGATCGTTTCG 11681 30 90.0 0 ........................C.CG.. | ========== ====== ====== ====== ============================== ========================================== ================== 21 30 99.4 36 CTTTAACCGTAACAAGTGATGTATTGAAAT # Left flank : TTATACCTTTTCTTGAAAAAGAAGGGCGGTAATATAGTGGCTAAAAATAAAAATTATAATTATGTAATATTAGTCTACGATATAGGGGAGAAAAGAGTAGGACGAGTTTTTAAAATCTGTAAAAAATATCTAGTCCATTTTCAGAAATCCGTTTTTCGAGGAGAAATAACTCCAGCTAATCTTCTTAAATTAAGAAGTGAATTAAAGAAGGTAGTTGATTCTGAATGTGATTTTATAGCCGTCTTCAAAATGACAGGGGACTATGTCTTTGACGAGGAGATTATTGGAGTTAGATTGAATAATTCAGAGTCCTTATTGCTGTGATTATCCCAACCTCTATTTAAAGCTGAATAAGGTTCATCCTTAGAACTACAAGGGATTAAAGGGGATTTAACATATATCTATAAATAATTACTTTCGGTTGGGAAAATTTCGCAAAACCCTTGTATTTGTAGTACAATCGGGATATACACGATTAATAAAAGCTTGATTTTACTAGC # Right flank : AAAGGATAGAGGTAACTGTCGACTCAATTCCTTTAATTATGTATTGTTTAACTCTACATATTCTGGATTTTTCGGCTGTAACACAAAGTCTCCTTTTTCTCACTGCAATGAACTAGACAAACCTAATCACTAGATCTAATCTTACTGATGATTTCTTCTTTTTCCGTAGCACCTTTATAGTGTTCTCTTTATGGTGGAGAATTAACAAATGAATTAGCAAAACGATTAAGTTAATATAGAAATGTTAGTTTTGAAATGATAAACGAAAAAGCGCTCATTAAGTAGAAAATGACTTGATGAATGCTCTTTTTTCAGGGGCTGAAGTATACCTTTTATATTTTTAGAATTATATGTAATAAGTCAATACCTATATGATCTGTCGCCTTAGTCTCTCAAGCCCGGATTTCGATTTTTCATTTGTAATCCCCTATATGATAAACTAAATGTTAAGATGTGGAATGAATTTTATGGTGTACAGGTTAATGATCTACAGGCAAGTT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:0, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTAACCGTAACAAGTGATGTATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.91 Confidence: HIGH] # Array family : NA // Array 2 23771-23346 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACJIP010000001.1 Fontibacillus solani strain CECT 8693 Ga0372433_01, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 23770 30 100.0 38 .............................. ACCGGAAACGGTGTATCTGGAACATAGTCCCCTGTAAT 23702 30 100.0 34 .............................. CTGGCGCGAGTCGCCCACCCTAGAGCCATGCCGC 23638 30 100.0 36 .............................. GACATTTCCTTAAACTGTGGAAACATTCTCTCGTAT 23572 30 100.0 36 .............................. TGATATTAGGCTTATTGTCGTCTGCTACGTTCCTTG 23506 30 100.0 36 .............................. TCTCGAAGTGAGGGTAGTCTTTAAATGACTTCCAAT 23440 30 96.7 35 .............................C TTTGTATCCTGCTCCACTATCGGCTCTACATAAGC 23375 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ====================================== ================== 7 30 99.5 36 CTTTAACCGTAACAAGTGATGTATTGAAAT # Left flank : ATCGCTGAATACATCTTCACCAATCCTGAAATTAAGGATATTCGCACATTGTTTGCGATGAAGGAAGGCGAAGATTACCACATTGAAATGAAGCTCGAAATCGATACCTCGATTTCAGTAACAGATGCGATCAAAATTAAAAACAGAATTGAGGGTAAAATCCAGGAAATGAGGGGCATTACCGACGTTATTATTGAGTTTGAAGAAGACGACGGTGTTCCGACTTGGGTGAATACTTATAAGCTTGCTGAGGAGAAGTAATTCAGGTATGTATCTAATTGAAAATAAAAATTCAATGCAAAAATGAATAATAAACCTTAATATTTTTCCCAACCTCTAACTACAGGAAAGGGTTGATGTTCCCTTATATCATAAGGGCTTTACCCTGTAGAATGTCTTTTTTCAGAAAAAGTATAGACGGTTGGGATAATTCTTAGAAATCCTTATTCTTCAAGGGTTTCTAAGGTGAGCATCATTTAAATAAGTTTGATTTTTCTAGC # Right flank : TGAAGCAGTTATTTCGACTGTTGAAGGGGCATGTTTATGCCAGAATAGAACGAACATTGGTTATGATGCTTAAAAAGAAAGCGGTCTTTGGATCAATTTGTTCAATAACTTCTGCATGTCTGGCGCTTAGATCAAGAGATTTTACTTGATCGGTCAATACAACTCCGGTTAATTGGGATTGCGCAACTCGTGATCCTGAAATCAGAATGCCAGTGGGAATTGGAACTTCGAAGGGGTAGTCTCTTGCGGTGTTTGTTACGGACGCAATTAAAGCAAAGGATGAGTTTTCAGGATCAATTAATCCATCTGATAGTACGATTGCGGGGCGATAACCTGCTTGTTCATTTTTAGCTTGAGGATGTAATTTAAGCCAGATCACACTTCCGCGTGTTATTTTTCCGGTGATAGGCATTAAATTGATTCATCTCCCATCGGTTCATGGAACATCTCTTCATGCTTGAGCATGCCAGGCTTGCATTTGGAGCGTAAAGCTAAGAAAT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:0, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTAACCGTAACAAGTGATGTATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [58.3-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.18 Confidence: HIGH] # Array family : NA // Array 3 280194-277709 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACJIP010000001.1 Fontibacillus solani strain CECT 8693 Ga0372433_01, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ====================================== ================== 280193 32 96.9 33 ..........T..................... TTATAATCCTGCTCATGGTAAAAAAGAACGAAT 280128 32 96.9 36 ..........T..................... CGCTATAATCGCTGTAATAAAATAATATGTTTTATT 280060 32 96.9 36 ..........T..................... TGCGTACTGGATTTACATCTAAAACGTACAGTCCAG 279992 32 96.9 36 ..........T..................... CTCTTTGTGACCTTGGACAAGACGGTGGAATATCGC 279924 32 96.9 36 ..........T..................... GGAATTTTACAGCAAAGACAACAGAGGACTTGCAAC 279856 32 96.9 36 ..........T..................... TTGATTTGGAAACAACAACTAACATAGAAGTAGCAA 279788 32 100.0 33 ................................ TTTATATAAGTGTTTAAGTACACCGTGAGTTTT 279723 32 100.0 32 ................................ TCCCTCCTATTTTTTTTAACGTGCGGATCCGC 279659 32 100.0 34 ................................ ATACAGGGATATGGGGAATAGCAAGGGTGATGAA 279593 32 100.0 34 ................................ CATCGAATGATGTCGCATTTTCAAGTAAAGATTT 279527 32 100.0 34 ................................ TAAAAAAAGTGAGGTTAGTTGTTATGGGTGAAAT 279461 32 100.0 33 ................................ TTAGAACATTTACAAACAAGACCAATACACAAC 279396 32 100.0 34 ................................ TTTTGTGGTTTAAGGCTCTAATCAAGTGGTGGTA 279330 32 100.0 34 ................................ TCTTATTTCCGTGCAGTGCTGCCAATAAAACCAA 279264 32 100.0 34 ................................ ATAAAGACTTTAAGGGATTCATTAAGCATATCTG 279198 32 100.0 35 ................................ TCGGATGATATATACGTGACTATTAACGGTAATGA 279131 32 100.0 37 ................................ GATAGTCGCAAATGGGGAAAAGAAGAAAATATTACAC 279062 32 100.0 35 ................................ CTTACGTCCGGCAATCAGAGATAAAAACATGTCCT 278995 32 100.0 38 ................................ AGCTGATAATAATGAAACATTAGATTACGAAATTGAAA 278925 32 100.0 34 ................................ TGTTGGAATAGTATAACTATCACTAATTGCACCG 278859 32 100.0 34 ................................ TAGTCATCCCAACGTTTTATTTAGCTATGCTTTT 278793 32 100.0 35 ................................ AGAGGCTGCTCAATCTGCTGGAATCAAGATAGGTA 278726 32 100.0 36 ................................ CAGAAGCAAAAGCGGGAGTTGGCTGAGAAGGATACA 278658 32 100.0 35 ................................ TATATCCTCAAATGACGAGTAATCCTCCCATTGAT 278591 32 100.0 32 ................................ GACAATGGAATTTTAAATTTATCATAATTACG 278527 32 100.0 35 ................................ CATCATATAAAGCTTGCATAGCAATTGCAATCATA 278460 32 96.9 34 ............A................... CGGTTGGTTCGATAATTCCATCGAAAAAGTCATA 278394 32 100.0 34 ................................ TTAAGGACAATAGGAGCATTGTTGTGGATTGATT 278328 32 100.0 33 ................................ GTGTGAAGACAATGTCCATATTCAATCTGCAGG 278263 32 100.0 33 ................................ GTGTGAAGACAATGTCCATATTCAATCTGCAGA 278198 32 100.0 32 ................................ GATGATGACGATGATATAGGGGAACGGGTTGC 278134 32 100.0 34 ................................ GAATAGTAAAGCGAGCAGCTAAAGAATTTAAGAT 278068 32 100.0 34 ................................ ATAAACACATATAATAGGTTGTAATGCATAGCAC 278002 32 100.0 34 ................................ GGCATCGGAGAACGAGGAAGTATAAGGGAATCCC 277936 32 100.0 33 ................................ TTTATACCGAGTAACTAGTTGCTCGGCGGTAAG 277871 32 100.0 35 ................................ GAACATGCGAGGGCTAAACTCGCTGCCGAAAAATC 277804 32 100.0 33 ................................ TGTTGACGGCAGCCTCATGAATTTAAGCTTATT 277739 31 81.2 0 ....................A...-..AC.TC | ========== ====== ====== ====== ================================ ====================================== ================== 38 32 98.9 34 GTCGCACCCTACGCGGGTGCGTGGATTGAAAG # Left flank : ATGAGTATCCTCCATTTTTATGGAAGTAGGTGTTATAAGTTATGCTTGTACTGATTACCTATGATGTGAGTACAATCGATGCAGCAGGACAGAGAAGATTGCGGCAGGTTTCCAAGGCGTGCCAGAATTATGGCCAACGGGTTCAGAACTCTGTTTTTGAATGTATTGTGGATGCAGCAGAATGGGCTGCTTTAAAAATCAAGCTCATAGAACTTATTGATCCCGAACAGGACAGTTTACGATTCTACCAATTGGGCAATCAGTATAAAAATAAGGTTGAACATGTGGGGATCAAAGCCTCACTTGATTTAGAGGGTCCTCTAATTCTGTAGTGCGAATGTGAAGCGAACATGTTTTTCCTGGGGGATTCGCACCAAAATAAATTGAATATATTTCAATATATGGTATGTTGTATATATTTTCATGAATGAATAATTTAATTATATTATCTTAAATGGGAAAAAATGATAATTAATATCCGTATTATGTTAAATTTCGGA # Right flank : ATCCACAAATTACAGCAGCCTTTTCATACCGTCACGGGTTCAGGTAGAAATATGTATAGGTGAAACAGCAATAATCCAGTACGGTGCTAGTGATTAAAGGATGTTGGTGATAGGTTAAGTTGAATTTTGTTGTCAACTCCGCTTTATTAACAGATAATATTATTGTTATTGTAGATGCGAAAAAGAACCAAGTATGGCAAAAAACATCCATGCGTGGAAGGTAAAAATTTTACGTTATAAATATCGATATCTCGTTATTGAAGGAAGGTGTAAATGCATGAGCACAGACAACCCAATTTTGTTAAATCGTGTGTTTACACGAAATATGTTACGTGAAATAGTGGACGGGAGTTATAGTGATGCCCTTACTACTGCTATATGCAGATATGTTGCTGATTCATCAGGAAAGGACAACAGGCAATTAATAAGTGAATTATATACCGTTTTAAAAAAACAATATCGCAACGAATATTTTTATAAAAATACAATACTAAATAAAT # Questionable array : NO Score: 9.21 # Score Detail : 1:0, 2:3, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCCTACGCGGGTGCGTGGATTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [6,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCACCCTTCGCGGGTGCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-8.60,-8.50] Score: 0/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [58.3-80.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.68 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 4 290102-288748 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACJIP010000001.1 Fontibacillus solani strain CECT 8693 Ga0372433_01, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 290101 32 100.0 34 ................................ TCCCTCCAATAAACCCATCATGGTTGATCGTTTG 290035 32 100.0 34 ................................ AGACCAAAGATTATGATAGAAATAATGCTAATGA 289969 32 100.0 35 ................................ GTGAACAACAAAGAAGTGTTGGAAATCGATAAGAT 289902 32 100.0 34 ................................ AATTTGAATGTGAAGCAAGGAAATGAAGGAGGTC 289836 32 100.0 34 ................................ TTCAAAAAAGTCCTTTGTTTGCTTTTCACCTTTT 289770 32 100.0 34 ................................ AAAACAGCGATGACGGATTACACCAAGGCCAAAC 289704 32 100.0 32 ................................ TACTCTCTTGCTCTGCGAGGACGGACAGTATA 289640 32 100.0 35 ................................ TGATCATCCTTATCGTTGTAATCCGCCTCTACAAA 289573 32 100.0 33 ................................ TGGTAACGATATTATAATAGCAAAGTATGTAGT 289508 32 100.0 33 ................................ AGCAAGAGTAATTAGCATCAGTCAGAGTCTTGC 289443 32 100.0 33 ................................ CGTGTACTGTCATATCCTTTTACCTCTCCTCTC 289378 32 100.0 35 ................................ GACCGACAGCAATATATTGATTTTCACGGAGTTGA 289311 32 100.0 35 ................................ AAGTAAATGTCAACTTGCTTGTTGACCACGATCTT 289244 32 100.0 34 ................................ CGAGAGATGAAGATTGTCCCACCTACGCCAGATC 289178 32 100.0 33 ................................ TTTTAACGTGGCTGAAAAAACAAGGTATTGATG 289113 32 100.0 34 ................................ GGCAAACTGATCTTATTTGACGAGTCTGAATACG 289047 32 100.0 36 ................................ CCGAAAAATGATGCAACAGTCTTAAATTCGGATGAT 288979 32 100.0 35 ................................ CTGGGGGGCCGGAAAGGGTTAACCTGCGGGGACAC 288912 32 100.0 35 ................................ GCAAGCGGCTTCCGTGGCTTCTGCCTGTTGTAGAA 288845 32 100.0 34 ................................ GTGAAGCAGCTTAGCAAGGGGTTGATTAAATGAC 288779 32 87.5 0 ................A..CA..A........ | ========== ====== ====== ====== ================================ ==================================== ================== 21 32 99.4 34 GTCGCACCCTACTCGGGTGTGTGGATTGAAAG # Left flank : GGTTCTACGTTTAGATGCTCATACAATTGAAGCAGATGTGGATGGAGATGAGATCGAAGAAAATTGTATCCTCTGTTGGTACTGCGGCTGAGACAACGATCTATAAACTACATGACAAGCAGAGCGTTGTCAGTAATTTAAATGAACTGATGAAAGAACAAGTAGTCAATTATGACTTCAACACAAACATTTCCCAAGCTCAATCAACAAATAACGAGCTAACCAAGTGGAAGATTCAAGGGGATAGATTGCATTTAGTGGAATAAGACTTTACTGCTGGATGATTTGAGTACCTGCAACCGATCAATTTATACAATTATGTGGACTTTGGTGCGAATATAAAGCGAACATAGTTTTCCAAGGGGATTCGCACTCGATAATTTAACATTATATTCTATAACATGAAATTATTTCATGGGTATGTATCCTATTTTTACAAAAAGTTATACCTTTACAAGCTCTTATTGCAGTGATTCTTACAATATATGTATTTATTCGGA # Right flank : TATACTCTTCGCCAGTCCCTAATCTGTTTAGTTGTCGCATCTTAGAAAGTACGTTGATTATACATCTCTGATGTTCGGTGTTCAGGTATATGATGAGGGAAGTCCAGATTACGAGTCTTGTATAAGTGGTATTTTGAAAAACAAGGGAATTTGGGGGCAAATATATATTTAACTGTACACGAACGAGCTATAGAAGCAATTCAATAGCTTGTTTTTTTGAATATCTTCTTTTGTCCATAACAAAAGATGTAACAATTTCAAGTGTTGTCAGGATCATAATTAGTAACACGATATATGAAAAAATAGAAATTGGAAAGAAATTTGTTGAATTTTGGAAGGGGAATGGTGTAGTTCTGGAGAAGTAAAATAATATCTCCAAATTTTTGAGTCATATGAACTATTTTTCCGATGGCAGGAGGTGAAGCAAATGGAATATATCGCTCACATCCGTGTGAGTGACGGGGAACGTCAAGCGCTTAAAACACATCTGCTTGGTGTCA # Questionable array : NO Score: 9.23 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCCTACTCGGGTGTGTGGATTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCACCCTTCGCGGGTGCGTGGATTGAAAT with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-5.50,-4.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [61.7-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.74,9.68 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //