Array 1 13473-12895 **** Predicted by CRISPRDetect 2.4 *** >NZ_BCTH01000116.1 Janthinobacterium agaricidamnosum NBRC 102515 = DSM 9628 strain NBRC 102515, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 13472 29 100.0 32 ............................. TCGCGTGATGTAGCTGGTGTTTGTATCATTGC 13411 29 100.0 32 ............................. GCCATTCAAATAGCGGAAACGCAGCCTAATAG 13350 29 100.0 32 ............................. GTTGGCGTATTCCCTTATCTCGGCTCGCAAAT 13289 29 100.0 32 ............................. TTAGGATGGCTGGACGATATAGACGAAACACC 13228 29 100.0 32 ............................. TCATGAAGGCCATCGGTGGTCGCCTGCCTGAC 13167 29 100.0 32 ............................. CCAGATAATCATTGCGCGCCTCCGCGTTTTTT 13106 29 100.0 32 ............................. CAGATGATGTGTCTCATAATCCGTTGGTGCCG 13045 29 96.6 32 ............................T ATTGATGACGTATCCATGCGAGGCGCGCCATC 12984 29 100.0 32 ............................. CGCCGTATCGCGGACAAATTGTTGACGTTGTT 12923 29 89.7 0 ..................A....A....A | ========== ====== ====== ====== ============================= ================================ ================== 10 29 98.6 32 GTGTTCCCCGCGCCTGCGGGGATGAACCG # Left flank : TATTGAAACCATCCTCGCGGCAGGTGGTTTGACGGCGCCCGAGCCGTCCGAAGAATCGATGCCGCCAGCCATCCCCAATCCTGAAAGTATCGGCGATGCTGGTCATCGTTCTTGAAAACGCGCCGCCACGCCTGCGCGGCAGGCTGGCCATCTGGCTGCTGGAAATTCGCGCCGGCGTCTACGTCGGCAACTATTCAAGGAAATTGCGCGAGCAGATGTGGCTGCAAGTCGAGCAAGGCCTGGAAACCGGCAACGCCGTGATGGCATGGCGCGCCAGCAACGAAGCGGGCTTCGACTTCGTCACCCTCGGCGAAAATCGGCGCATGACCGCCGAAATGGATGGCGCCAAACTGGTGTCGTTTTTCCCGGTTGACGATGGCTTGTCAGAGTAGTCCAACGCGCCAATCGCACCGCTCTCTAACAATCAAAATCTCCCCCCTGAAATCGGTAGAAAATTCACCTGTCGTTTAAGCCATTGTAATCAATGACTTATAATTGGT # Right flank : CGGGTGACTTCGAGATATCGCCAGCTTTTCGCGTGTTGCTCATGCCTGTAGCGAGGTTTATTCGGGAGCGGCAGTAATACCCTCCCGATCGAGGACCTGTGCGATCAACAGGCTGAGTCGATGTCACAGCTGCGCAAGATATTCGGTAAATAGATCCGGCAAAAATCGAGATACGCCAGCACGATGGCAGATGGGTGGCGATGGGATGGATAAAGCAAGTTGATGTCGACCTCGGGAAGCGGGTGCTGCGTCAGTAATGGCAGCAGGCGTTTCGCCTTGATGTGAGGGGCGGCCAGGAATGGCGGCAGCTCGGTGATCACATGACCGTCGAGCGCCCAATGGCATAAGTGTTGGTAGTCATTGACACGCAGCATCATCTTTGGCGCGACGGTATGGCTGCCTAATTTCCATCGGGCTACGTCATCAATGCGCGACGCCCACGCGGCGCATGGAAATTGATGCAGCGTGTCTGGTTGTGCCGGCATGCCATATCGCTCTAT # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCTGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCTGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [46.7-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 820-71 **** Predicted by CRISPRDetect 2.4 *** >NZ_BCTH01000117.1 Janthinobacterium agaricidamnosum NBRC 102515 = DSM 9628 strain NBRC 102515, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 819 29 100.0 33 ............................. TATGGCGGTATGTCGGAACGTAGGTCGCGCAAT 757 29 100.0 32 ............................. TTGTCCGGCTTGTCTTCCACGGCCGCCTGGTG 696 29 100.0 32 ............................. TACTGGACGCCGCCCAACTGCGCGTTGATGCG 635 29 100.0 32 ............................. GCGGCATCATCAGGAAAATAAGGCACCTGCAC 574 29 100.0 32 ............................. TGGGGTCAGTACGACCTGTGGGTCTACAACGA 513 29 100.0 32 ............................. GCCCAGGCCATCGAGCACGTCGAAGCGTCGGC 452 29 100.0 32 ............................. TCAAAACCATGCGCTCAGCGTCATCACCCAAA 391 29 100.0 32 ............................. TGGTAATCGGAGTTGTCCATCAATCGTTCCGC 330 29 96.6 32 .................A........... GGCAGTAGCGATGCCTACGCCGCCGACGTGAT 269 28 72.4 32 ........GTTT.T.-..A.........A ACCATCTTTGATGCAGCTCGGCAAACCAGCAA 209 29 75.9 20 ....C.T.....T.A...A...CA..... CTATGATCTGTAATCGTTAT Deletion [161] 160 29 82.8 32 A.......A...ATT.............. AGGGAAAGTATGGTTTGGATACGGTCCATACG 99 29 79.3 0 ........T...ATT..A........T.. | ========== ====== ====== ====== ============================= ================================= ================== 13 29 92.8 31 GTGTTCCCCGCGCAGGCGGGGATGAACCG # Left flank : ACGCCGCCATGGTGCGAGCAAGTTCCCCGTGCGCTTTTACTGAAACTATACGACCCGTCGCGGCATAAGGCCGACGCTCCCTGTGGCACTTTGCCGGTCTTGCTTTTTGCCGGCGAATGTACTTCCTCGCCATCCTTATTCCTGTAATGACCATGCTGCTGCAAGTCGGCCTCGTTGGGTTCGGCCTTTTGCGCGTAAGCAGGTGATTTACTGTCCCTGGCTTCGACTGACGATAGGGAATAAGGAGAAAAGACAAGCAGCAGTATGACAAGCAGGCGGCGCAGGTTCATCGTGAGATTATTGTTTTCACGGCATACCAATGTGCCGTTGCATGATTGATTATATGAAATTATTTTATTTATTGACAAATTTCATTATGGGCGGGTGCTTGTTTTTGGTGATCAAAGTGGCGTGCTTCTTTAATGATTTAAACCCCCTGAAAAATCGGTAGAAAATTCACCTGTCATATAAATCATTGTAATCAATGACTTATAATTGGT # Right flank : GGCCGCGAGTTCGAGTACCACCGCTACACTAAGAGCCTATCCCAGTAGATGAATACGCCCTCTTCTGGCGC # Questionable array : NO Score: 5.83 # Score Detail : 1:0, 2:3, 3:0, 4:0.64, 5:0, 6:0.25, 7:-0.06, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCAGGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [4,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCAGGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-11.70,-13.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [26-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [45.0-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 107860-108864 **** Predicted by CRISPRDetect 2.4 *** >NZ_BCTH01000028.1 Janthinobacterium agaricidamnosum NBRC 102515 = DSM 9628 strain NBRC 102515, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 107860 29 100.0 32 ............................. ATGCTGACAGGCCGTCTTTCCTTCGATATGCA 107921 29 100.0 32 ............................. GCCTGACAATAGTGCACGGCAGCGGCAACGCA 107982 29 100.0 32 ............................. GCGGTTGACTTCGAGTCACGCGGATTCGGTAA 108043 29 100.0 32 ............................. TGCGGATGATTTTTAACCCCTCGAAGGAATTT 108104 29 100.0 32 ............................. AGGGTCTTGTACTTGCTGGTGCTGGTGGTGGC 108165 29 96.6 32 ...A......................... CCGCTCACCCGTGGGTGGTGGAGCGGGATTAT 108226 29 100.0 32 ............................. GCCGAGCTTGACGTAACCTGGGATGCGTTCGC 108287 29 100.0 32 ............................. CCGCAGCAGCCCGCCATGCATTGTCAGCAATA 108348 29 100.0 32 ............................. ACCAGTGGTCAGGAGTTTGACCGTGCAATGCG 108409 29 100.0 32 ............................. TTTTAGCGGGGAGCCCCGTTCCGTCTTAGTAC 108470 29 100.0 32 ............................. CGCCAAAACAACAATCAACGCCGCACCAATGG 108531 29 100.0 32 ............................. TGAACGTCGACCCGGCAGCATACCCGATGCGC 108592 29 100.0 32 ............................. ATTTTTTCTCCATCGCTGGCCGCTGGCGTCAA 108653 29 100.0 32 ............................. AGCATTAGCGCTGCCGATCCCCGCGCCACTGG 108714 29 96.6 32 ............................A TCAGCGCATCATTATTCATAATGGGATATTCC 108775 29 100.0 32 ............................. GTCACTGGTGGCGCCGGTGATTCGGCCCACCT 108836 29 86.2 0 ....................C..C..TT. | ========== ====== ====== ====== ============================= ================================ ================== 17 29 98.8 32 GTGTTCCCCGCATGCGCGGGGATGAACCG # Left flank : CCTTCACCGGCGCCTTCTACGGCGTGGTGCCGGAAGACAAGCAATTCCTCGGCGGCGAATCGGTCGGCGAATTGATGGACCGCGTGTTTCCCGCGCTGGACAAACTGCGCGCCGACCCGTCGTGGGACACCGTGCTGCTGGTCTTGCACGGCGGCGTCAACCGGGCGATCCTGTCCTACGCACTGACCGGCCAGCGCCTCTTCCTCGGCAACATGGCGCAAACGGCAGGCTGCATCAACGCACTCGACGTCGGCACCGAAGAGCACGACTGGGTAGTCCGCTTCACCAACTTCGCCCCGCCGGGACCGCTGCAACTGCATACCCGCAGCACGACGATGGAACAGTTGCTGGAGCAGTACAAGAGGTCGCGCAGATAGGCTGTTTGAGAGCGCTGATGCCGCCGAAAAACATCCATATCAATGCTTCTCCAAAACGCCTGAAAAATCGGTAGAAAAATCATATGCCATTTAAGTTATTGTAATCAATGACTTATAATTGGT # Right flank : GAATGCTTTCCGCAGATACGATTAGTTCGATACAGGCAGGTGGTACATTTATCGGCACGGCGTTGAGGATGGCAAAACCGTCATGAAGGCGCTTGAGCATAACCAGTCCGCCGCCCGCGCCCCCACTGCTCGGCATCCGCGCCCCGGCCCACAACATGAACCCACTGTCACGACGCTTGCATGCGACACGGTGCCAGGAATAATCGCGCAGGTTCGCCGATAACGATGACGATGAATAAAAAATTACCTTGAAAATAAATACTCAATTAGTAATATTTTTTCATTAAACGATGTATAATTAATATTTGTGTTATTGATAATTAAATAGGGAAAATGAAAAAGATACATTTCGCCAAACTGCTGCTGAGCACTCTCATCGTCAGCGCATCCATGCATGCCCACGCCACCACATACTCCAACGTTGGCCTATCGTCGACCCCCATTTGGACTTTCGGCAAAGGAGCGACCCCGAATTACGGCGAAACCTTCACCTCGCCCGG # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCATGCGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCATGCGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //