Array 1 11151-10748 **** Predicted by CRISPRDetect 2.4 *** >NZ_FRCV01000022.1 Halanaerobium congolense strain UTICA-W4B2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ===================================== ================== 11150 37 100.0 37 ..................................... CACTCCTTTTATATGTTTGCGATTACAATAAGACTAG 11076 37 94.6 36 ........C.........T.................. TCATTATAAAAACCTCCTTCAAATAGTGCTCCCTAA 11003 37 100.0 36 ..................................... TTTTCTGCTGCTTCCTTTGCACTGTCTTTTGCGTTA 10930 37 100.0 36 ..................................... TATGTTCATCTTCACTAACTAATCTTCTTCTTCTTT 10857 37 100.0 36 ..................................... TTCTCTACAGCATATTTTACTCCAGCTCTCTGAAAA 10784 37 94.6 0 .................................GA.. | ========== ====== ====== ====== ===================================== ===================================== ================== 6 37 98.2 36 GTCAGAATAAACAGTCCACTACAACAAGGATTGCGAC # Left flank : TAGATCAAAAGACTTATTCTGAATTAGAGAATAAATTAAAAACAGAAATAAATAGTCAAGACGATAGCATTAAAATCTATTTTTTCTGCAGCAGTTGTGAAAGTAAAATTAAAAATCTAGGTAAAACTAATGAAGATTTTAGCAATGGTGCGATAATAATATAGTTTTTTCTGTATTTTCTTGCCATTAGAGTAATATAACGATATAATATGTTTAATAGATAATAAACAATTGAACCTTTAAAAGTAAATAGTAGCAATAAATGTATTAAATTATTAATAATTATTTCTATCGCTGTCCTCTGGAAGGGTCAAAAGTCCCCTAGGTTAGCGCAAATAGAGAATAACAGAGTATATGTGAGTATTCGATAATATATAAGAGCTAATTAAACTCTCATATATTTCCAATTTTGTCGAATCGTCTTGAAAAATTTGTCGAAAACAGAGGTTAGCGCAAATGGATATTTTAGCCCTGTTACAATAGGCTTCGCAAGGGGTACT # Right flank : AGATATTCTTTCATGGCTAAACAACCTTCTTACTATGCTTAAGGTGTAATTCTACAACAATAAGTATAACCATTACTAGTTGCTATATGCAGCTAGTTTTAATTTATTTTGATTAATATTTATCGTTTTCTAATGAATTAATTTGATAGATAACAGAAAAGATAGCTGATAAATATTAAAAAAATCCTAATCGACTTGATTAATAAAATCCAATCAAGTGCTATTACGGATTTAATCAATGGTAGTTGTCATTATTATGAGTTACTTCTTCCATTAAACCAGTTAATATCGTGATGAACATTATTTTGGCTCAGAATCATCATAATAAGAATATAATTAACTTAAGAAGAACCTATTACTTTAGCTGTAGCTTTGTATTCTTTCCTGGACTTTTACATTTAATTTAGCAATTAATAGTTTTTCTATCACAAATTTAATTACAAGCATAATTAATTATTAAAGTGGTTTATTTGCATAAAATATAATAGTAAATTATTAAG # Questionable array : NO Score: 3.17 # Score Detail : 1:0, 2:0, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCAGAATAAACAGTCCACTACAACAAGGATTGCGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.76%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.40,-2.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [68.3-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.78 Confidence: MEDIUM] # Array family : NA // Array 2 20886-20038 **** Predicted by CRISPRDetect 2.4 *** >NZ_FRCV01000022.1 Halanaerobium congolense strain UTICA-W4B2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================= ================== 20885 37 100.0 39 ..................................... CCATAAAAAATGATGTAATATGCGGGTAAAAGCATAGAA 20809 37 100.0 37 ..................................... ACAGGCCAGATTGCTGGATACAGAATGCTAAAGAATA 20735 37 100.0 37 ..................................... AAGAACTGGAATTAGTGGAGAGAATAGCCTTGCAGAA 20661 37 100.0 37 ..................................... TACATCTTTTTCTAGGGCTACCATATTCCTTTTAACC 20587 37 100.0 36 ..................................... CTTGTTCCTAGATCATCAGCTACTTGTTGCAGCGAA 20514 37 100.0 35 ..................................... TTAACTTTTTCATATTTACCACTCCTTATATATTA 20442 37 100.0 38 ..................................... TAAATTCAGTTAGGTCAATTACACCATTATAATTTTCA 20367 37 100.0 35 ..................................... TTTGTCACCCTTATGACACAGTGTATCTAGTATCT 20295 37 100.0 36 ..................................... TTGCCGAAGGCTGAACGTTAGAGAGAGTACTTAAAA 20222 37 100.0 36 ..................................... TCTTCATTATATCTTTCTGGGTCGATACCATTTAAA 20149 37 89.2 37 ....G...A.........C..............A... TTCTTTTTCTTGTCATCAGACTTTTTCTTAATAGTAA 20075 37 81.1 0 ....G...C.........C.............T.ATT | G [20041] ========== ====== ====== ====== ===================================== ======================================= ================== 12 37 97.5 37 GTCAAAATTAACAGTCCATTACAACAAGGATTGCGAC # Left flank : TCGCTGGTATAATTAAAGATTATGGTGTAAGAGTGCAGTATAGTATATTTGAATGTGATTTATCAGATGAAAAGTATGATGAATTATATAATAGATTAATTGAAGTAGTTAAAGCAAATAAAGACAGCATCAACATATATTTTTTATGTGAAAGATGTTTGAAAAATAAAATTAGCTTAGGAAAAGAGAAAAGATTCAGCATTAGAAGCGACGTTATTATAATTTGATAATATTTACAATCAATGATAAAATATAAATAACATAATAAATATTGAATATATGTAGTTAATTATAATCTCGAAAAAAGAGCTTTAAAAACACTAAGGTTGCCGCATTTTGAGTATTTGAGAGTATTAAGGGGAAAATAGGAGAATAGATGAGATAATCAAAGTTTATTTTTCACTGTTTTCTAGTAAATTAATGCAAAATTTTATAAAAACAGAGGGGTTGCCGCAAATGGCAATTTGAAGCTTGTCACAACAGGCTTCGCAAGGGGTACC # Right flank : ATAAAGAGAATTTTAGAATAAGAAATATTAAGAGGAAAACTAAAGGTTAAGTGTGAGCTTAATATTTATTCTTTAACTTCTAATAAAGTATTTGCCCAAAAAAACTTGAAGATATACTTATAAATCAAAAAATATATGGGACTTATTTTGTTCTTAATATTATGAAAAATGAATTTTATAATATATCATATTGATGTCTATAGAATATAGTTAAGCCAGCGCCCAAAATCATGATGAGAATGAGGTTTTTTATTATTTCAAAAACTATAATACTATATAGTATTAAATAAAACAGGAGGTGTTTTAATTGGATTATGAAATTGTTGTTGATCCCTCTGAAGTAAGAGAAAGATCTTCAGATAATGGAAATTTGACAAGAATAGATGACATTGAATCAGATGATGAAGAAAAAGAATAATCACTCTCAATTAATTAGTAGACAAATTAATAATTTATTTACTAATTTATCACACAACTACAATATATTATTCGATAATTGG # Questionable array : NO Score: 3.14 # Score Detail : 1:0, 2:0, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCAAAATTAACAGTCCATTACAACAAGGATTGCGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.16%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.40,-2.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [12-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.78 Confidence: MEDIUM] # Array family : NA //