Array 1 178906-176584 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAACYB010000002.1 Flavobacterium salilacus subsp. altitudinum strain LaA7.5 NODE_2_length_533192_cov_412.416700, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================================== ============================== ================== 178905 46 100.0 30 .............................................. TTGTGTACTATCTCGTCGCCCATTGACGAC 178829 46 100.0 29 .............................................. CATGTTAAAAAGTTGTTCAACATAAGAGA 178754 46 100.0 30 .............................................. GTAACCGAGCTTAGCCACTTCGTTAACGGC 178678 46 100.0 30 .............................................. TTAAACATGAAAATATATTTTATACATTTT 178602 46 100.0 30 .............................................. TCCATGCTGTTTACTGTAAATTCTTTGTTC 178526 46 100.0 30 .............................................. CTTTCATCAATAGTAACATGAGAGTTTTTA 178450 46 100.0 30 .............................................. TGAAGCTGTAAGGGATGTTAATGCTTATGC 178374 46 100.0 30 .............................................. TACATAGTACGAATAGCTTTGCGTAAAGGT 178298 46 100.0 30 .............................................. CATGCCGCCCTTTTTAACTAATCCGTAAAC 178222 46 100.0 30 .............................................. AACAAGTGCATCATAAGAAGTATAATCACT 178146 46 100.0 30 .............................................. AATGCAGGTACTTACGAAACAGCTACGGTG 178070 46 100.0 30 .............................................. AAATGTAGTCAATATAGACGAAGTTACCGA 177994 46 100.0 30 .............................................. AGACCCTAACAATTTAGATTATTTACCTGT 177918 46 100.0 30 .............................................. GAAAGTCCTTTTGCATATCTTGTATTTCTA 177842 46 100.0 29 .............................................. GGGTTATAAAATTTACCATCATTTAATGT 177767 46 100.0 30 .............................................. ACTTACAAACGCATGCCTTTTACTTTCAAT 177691 46 100.0 30 .............................................. TGTTCTCTATATTTTAAAAGTCCTTCGCGT 177615 46 100.0 30 .............................................. AACTTTTCCTGAATAAACATTGTATCGGAT 177539 46 100.0 30 .............................................. TGGCGGGGGTAGCGAAAACAGAATAAATAT 177463 46 100.0 30 .............................................. GAAAAAGCTATTAGAACCAAAAGAATAATG 177387 46 100.0 30 .............................................. TACCCCCTACTAATTCTTTTTTCAATTCTA 177311 46 100.0 30 .............................................. GTTGTACGTCCTATTGATGCTATTATAGCT 177235 46 100.0 30 .............................................. AAAATAATTATCCACCAAAATAAAAGCACG 177159 46 100.0 30 .............................................. GAATAATTTTGAAACATCGGCTTCTAAAAT 177083 46 100.0 30 .............................................. AAGTCAATTAGACTTAGCTGTAACAAGTTT 177007 46 100.0 30 .............................................. ACCCTATTGGTATTATAATCGTGGCTATAG 176931 46 100.0 29 .............................................. TTTGCAAAAACAAGCAAGTTATTACCCCT 176856 46 100.0 30 .............................................. CGTATTGACAGGGTAAATATTGGGATGCCA 176780 46 100.0 29 .............................................. CCGAACCATCGAAAGCAATAGCTTTCCAG 176705 46 100.0 30 .............................................. TTGTATTACCGGAAGATTTTCAAGGTAAAA 176629 46 100.0 0 .............................................. | ========== ====== ====== ====== ============================================== ============================== ================== 31 46 100.0 30 GTTGTGAATTGCTTTCAAAATTGTATTTTTACTTATAGTTCTCAAC # Left flank : ATTGTACTAATAGAATCGAAAGAAAGAATCTTACTTTGAGAACACATATTAAAAGATTAAGCAGAAAAACGATTTGTTTCTCAAAAAGTAAAATTTATCTTGAAGCGCATTTGAGAATTTATTTTTGGGGATGATTTATATGTACATAATTATTAAAAAAATGATTATATTACAGTTTAATAATAGTACACGAAACGGTACACGATTTTCCATAAATCAATCATATAAAAGGGTAGATTTGATAAAATATCGGTAATGTATCAGATTAGGGTTTTGCTTTAATTTTGATTGTAAACCATTGAAAAACAATAATGAAATAAGATTATTATATAAAAAACAGAGGCAGTATAATATCTACCTCTGTTATTTTTAAGGCTTTTAAAAGCCTTAAAATGTTTTTATTTAATCTTGATGTATCAGAATAGGGCATGGAAATAAAATCTACATATTTTATAAAATCCTTTAACCATAAGATATAAGGCACAGGCAGTAATGACATG # Right flank : ATACCATCATATAAAACGTTGGTATGTTGTTAATTATAAGGTGTTTTTGAAATAAAAAAATGACTGTTTTTATTTACAGATTCTATAAACAATATCAATTTTTGTATCATAGTTAAAAAAGCTCTAATTGTTGAGAAGGTTTTTCAGTACTTACAGATTTTCTACCATAAAAAATTTCCATCATTCCAAATTGCTTATCCGTTATTTGCATAACGCCTACTTTGCCGTGAGGTGGCAAATTATTGCGCACTCGTTTTGTATGCACTTCAGCATTTTCTCTACTGGCACAAAAACGCATATAGATAGAAAACTGAAACATTGAGAAACCATCATCTAAAAGTCTTTTTCTAAATGAGGTTGCTATTTTCCTGTCGTTTCGCGTTTCTGTTGGCAAATCAAAAAATACTAATACCCACAAACTTCTATATTGGTTTAAACGTGTGTAATAACTGTCATCATACATATACAGGATATAAAATTTTCCTTGAAGTTCCTTCAAA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGAATTGCTTTCAAAATTGTATTTTTACTTATAGTTCTCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.91%AT] # Reference repeat match prediction: R [matched GTTGTGAATTGCTTTCAAAATTGTATTTTAGCTTATAATTCCCAAC with 92% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-2.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [78.3-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.87 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], // Array 1 26-222 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAACYB010000615.1 Flavobacterium salilacus subsp. altitudinum strain LaA7.5 NODE_882_length_229_cov_1.072368, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================================== ============================== ================== 26 46 100.0 29 .............................................. GGGTTATAAAATTTACCATCATTTAATGT 101 46 95.7 30 .....................A.............T.......... ACTTACAAACGCATGCCTTTTACTTTCAAT 177 46 95.7 0 ....................C..............T.......... | ========== ====== ====== ====== ============================================== ============================== ================== 3 46 97.1 30 GTTGTGAATTGCTTTCAAAATTGTATTTTTACTTAAAGTTCTCAAC # Left flank : TCCTTTTGCATATCTTGTATTTCTAG # Right flank : TGTTCTC # Questionable array : NO Score: 2.52 # Score Detail : 1:0, 2:0, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGAATTGCTTTCAAAATTGTATTTTTACTTAAAGTTCTCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.91%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.50,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [30.0-6.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0 Confidence: HIGH] # Array family : NA //