Array 1 79799-80605 **** Predicted by CRISPRDetect 2.4 *** >NZ_JTAM01000030.1 Flammeovirga sp. OC4 contig32, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ===================================== ================== 79799 29 100.0 36 ............................. TTATCTACTATAACATCTTGTATATTATTCTGCTGA 79864 29 100.0 36 ............................. TTGCTTTCAATGTCTTCAGAAAAACGAATCTGGGCT 79929 29 100.0 36 ............................. TTATCTACTATAACATCTTGTATATTATTCTGCTGA 79994 29 100.0 36 ............................. TTGCTTTCAATGTCTTCAGAAAAACGAATCTGGGCT 80059 29 100.0 35 ............................. TATATGCCTATTCAATGTGATAGAAAAGGAAGGAA 80123 29 100.0 36 ............................. ATACAGGATTATTGGTAAATGATTTAGATGACCCAG 80188 29 100.0 37 ............................. ACTACTTGAAAAAATAGTTTGGTATGACAAGATAGGG 80254 29 100.0 36 ............................. TAAGATGAGTGAAGTAAGAAAACTAAAGCGAGAGAG 80319 29 100.0 35 ............................. GCGAGATATGATTGTCTGGCTTGAAATTCATTCCT 80383 29 96.6 34 .......A..................... AACCTAAATAACGGTGTGTAAGCAATAATACATT 80446 29 100.0 37 ............................. TACTGGTTGATGAGACTATCCACACAACGCCTTATAG 80512 29 93.1 37 T......A..................... TACACAAGACCTGCAGCACCAAGAACAGAAAAGAAGG 80578 28 93.1 0 T.......................-.... | ========== ====== ====== ====== ============================= ===================================== ================== 13 29 98.7 36 GTTTACTCTGAACTATATTGAATTGAAAT # Left flank : AAAAATAAAGACGATCATGCACAGCTCTACCATACTGCGAAAGATTTTGCGGAGAAGAAAAATGTGATTGGGGAGTATGAAGAGAAGGCGGAGGAATTGAGGGGGATGTTGGCTAATCAGGTTGAATAATAACAACCAAGACTATTCTTTATTGATACAGACCTGCTTTTTTAATGCTAGAAAAGCAGGTCTGTTTTTCAAAAAAATTAGGTTAAGATGGAGTGTTATAGAAAGAATTAATAGGTTATAAAAATTTACATAGTTTTACGTTGGAGGCTTATTTTAAATATTTGTCGTCGATGATAACATAAATAACAAAACTAATTGATCATCATAATTCAACGATATGATAAAGCACTAATTAACAGACTCTTAATAAAGTCGTCGTAGATAGACCTAAATCATACTAATAAAGGTCGACGACTTCTATTTTTATTTAATATTGAATTATCAGGGTATTTTGACTATTTTTGGCTAAATAGCGGGCAGAAGTCAATGGG # Right flank : TTTTTCAAAATAATTTTAAAATGAATAGAGACACTAGATATATAATTCGAATTCTAAATATGATACAAGAATTGTCGAAATATAGTTATACAATAAAGGACATAACCAGCAAATACGGTATCAAAAAATCTCAAATTTATAATGATTTTGCCACCATTGAAGAACTTATTAGTCCTGATTGTTTTTCTAAATCTTTAATTAAAGGAACCAGAACTTACGAGTATAAGCTCAAGCCTGAATATAGTATAGATGCCACCAATATTTTTTCAAAAGAAGAACAAGAAATAATACTTTCGACAATAAGTAATAGCTACAATGAAAATTCTCAAAGTATTTTTTTAAGCATTAGAAAGAAGTTTAAATCCCTTCAAAATGTCAATTGGTCGAATATTAATTCTATTATCGATAAAGAATTTAAACTTTTGCACGCAATTAATTCTGGATTGAGAATAATGCTATTAGATTATGAGTCACCAAGTAGTAATACAACTAAGGACTAC # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:0, 3:3, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTACTCTGAACTATATTGAATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [63.3-83.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.27 Confidence: HIGH] # Array family : NA // Array 2 89325-90272 **** Predicted by CRISPRDetect 2.4 *** >NZ_JTAM01000030.1 Flammeovirga sp. OC4 contig32, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 89325 30 100.0 35 .............................. TTTATCAGACCAAAAAAGACGTAATTAAACTTCAC 89390 30 100.0 35 .............................. ATTGATTCTAATTTCACCGTGGGTACTGATAGAAT 89455 30 100.0 36 .............................. TGGTCAGTGGCTACGGATTTAAAGTCAATGGATGAT 89521 30 100.0 36 .............................. GTGTTTGATAAATTGGATAAATACTACGCTAAGGTA 89587 30 100.0 36 .............................. ATTAAGTTAAAAAATAAGTCAACAGGTGAAGTTATA 89653 30 100.0 35 .............................. GTTGTAAAAATCGCGGGTTATGCGGATGCATCAAT 89718 30 100.0 36 .............................. GTCTTTGTCATATGTACCTCTACAAACGCAGTAACC 89784 30 100.0 36 .............................. ATTACATTAACTGTAGCTGCCATTGGTGCATTAGTA 89850 30 100.0 35 .............................. TTGGAAGGTGAGTCATTATTAAAAGTTACTGTAAA 89915 30 100.0 37 .............................. GCAAGATAGATGTATTATAGATGATGATCAAAGATCA 89982 30 100.0 36 .............................. CTTATATTGTTGGAGCAACAAATCAACAATTAATTC 90048 30 100.0 35 .............................. TCCATAGTGCCTCAGCATTTTTCGCCACCTCATCG 90113 30 100.0 35 .............................. ATGTACAAACGCACCGTAAAAGGTGGAGATGGATG 90178 30 100.0 34 .............................. CACTCTTGGCATTGGTAGCCAACGCTATTTTCAA 90242 30 83.3 0 .......................A.CTT.C | A [90266] ========== ====== ====== ====== ============================== ===================================== ================== 15 30 98.9 36 GTTTTGCACTGAACTATATTGAATTGAAAT # Left flank : TAAGTAGAAAAACATTATTAAACTAGAAATAATATGTATATAATTTTAGTCTATGATATCAATACAAAGCGAGTAGGAAAAATGCTCAAATTGTGTCGAAAATACCTCAATTGGATTCAAAACTCAGTATTTGAAGGTGAGCTTACAAACAGTCAATTAGAAAACCTAAAGGCAGATGCAAATGAGATTATGCAAGAAGGTGACTCATTAATTATCTTCAATAACAAAAGTAAAAAATGGCTAAACAAGGAAATCATAGGACAAGAAAAATCATCCATAGATAACTTCCTTTAGTCGTCGAGGAGCTTAAATTCTTAAGTATAATTTGAAAAATCAATATTGAATATATATAAACACCTAATAATTAGACATTTACATCAGTCGTCGTAAATAGGGGTAAATCATATTAATAAAGATCGACGACTTTAGATATAAAATTTATCAAGTATTTATGCCTTTTTAGCTATATTTACAGCAGTTTTTAGACTTTCTATACGGGG # Right flank : CTATAGAGCCTTATAAAAAGTAAATAATGATCTAGATTCTAATCACAAAAACCGAATCTCACTCCCTTCTTTCTCCGCAAAACCTTCAGCAACCAATATTGCTCCCACAAAAGAAGTAGTGCCTACTTTATTTGTTGTTTGCTGAATCCATTCTCCCAAGCTTCCCACGGTAGGTGTCGTTCTTGAAGTGCCAATTGGAACGGTCATTCCTTCAAATTCAGAGAGCAATTGACGATAGGTTTCTTTGTTAATCTCTAGTTTAGAGGATAGGTTTTCCCCCATATAAATGGTAGTGCCTTTATGAACACTTCCTGTATACTCAAAAGCACTTCTATTTCCCCAAGTGCTTAATTTCTTAATGTCCTTCTTCAAAACTTTCAAAGACTTAAAACTAACATCAACAGACTCCACAATCTCCTTGGTTACAAAAGTATCTGCCATAGAGAAAAGAAGCATTTCTGTATAGTACAACTCCTTTCTTCCATCTTGCCATAATTCTA # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:0, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTGCACTGAACTATATTGAATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0 Confidence: HIGH] # Array family : NA //