Array 1 958070-961051 **** Predicted by CRISPRDetect 2.4 *** >NZ_FNWF01000003.1 Peptoniphilus lacydonensis strain EL1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 958070 32 100.0 35 ................................ AACAGAATTATCTGTACAAGTGACAAAAAAGAAGT 958137 32 100.0 34 ................................ TTATAAGGTATCACTAGGCAAACTTGCACATCAA 958203 32 100.0 36 ................................ CAAAAAGGCGAGAATATTATTTTTACTGCTGATAAT 958271 32 100.0 35 ................................ ACGTTATTCATTTTCTAACTCCTTTAAATCTCATA 958338 32 100.0 36 ................................ ACAGGCACTTAAAAAAAATAATGAGAGCAATGATAC 958406 32 100.0 36 ................................ AACTCTCTAAAGTTTAAAAGTTCCCACGTCTTTTCA 958474 32 100.0 35 ................................ TTCTTATATCTTTATCAAGTGTATACATTTGACTT 958541 32 100.0 33 ................................ TCATGTAAGTAACCTCAGACTCAATGCTTGTAT 958606 32 100.0 35 ................................ GGTAGAAAGACAGGACTTGCTAATGTTATCCACAT 958673 32 100.0 34 ................................ ATTTTTCCACCCCTTTATCGAGTAAATCTTTGAT 958739 32 100.0 36 ................................ TTGATAAATTTCTAAATCTAAATCAGATTCAAATTC 958807 32 100.0 35 ................................ AAAATCTGCCTTACCTTGTATCAAGTTGCCAACAA 958874 32 100.0 36 ................................ TACTATTGCAATCACTCCTTTGTTGTGTTATAATTT 958942 32 100.0 35 ................................ ACTAATTTTAAGGTATAACGTAGGTGATATGCCAG 959009 32 100.0 35 ................................ ACTAATTTTAAGGTATAACGTAGGTGATATGCCAG 959076 32 100.0 34 ................................ TCGTCTTTTAAAACTTCTACTCTAGCACCTAAAA 959142 32 100.0 35 ................................ AATTCAGCAGCTTCAAGTTCACTTTCGCTTACCAC 959209 32 100.0 35 ................................ CTATAAATAGAAGAAACTTGTTATAAATCTATTAT 959276 32 100.0 36 ................................ TTTTGGGAACACGCTCTAAGCTAGTGATTGCAACGA 959344 32 100.0 35 ................................ CCAGCACGCACATCTTAAAAGCAAAAAAGATGCAG 959411 32 100.0 36 ................................ AATTTCATGTGCATCTATGCTAAATTCAAATGTTCT 959479 32 100.0 35 ................................ TCCAAGCTCTATATCTGTATCATAAAATCCTGTAC 959546 32 100.0 35 ................................ GAATCATAGACAAGATTATTTTCTTTATCTAGTAT 959613 32 100.0 34 ................................ ATCCTTTGTCATATAAATTGCCTTTTCATAACCA 959679 32 100.0 35 ................................ CGTCTGGATTGTTGATGACTCTTACCTTTGTTTCA 959746 32 100.0 35 ................................ TGTCATTATTTGATACTTGTACTTAATACCATTTG 959813 32 100.0 35 ................................ CACATTAACTGGGATTTTAGAAGGGAAACACACTA 959880 32 100.0 35 ................................ TAAAATATCCTAAGTATGCAGTAAAGGGTAAAAAG 959947 32 100.0 34 ................................ GTTAAATTTTCACTTTTATTTGTTCCTACATACA 960013 32 100.0 34 ................................ AACGCTTTACTATCACGTTACTCCCTCACCGTTT 960079 32 100.0 36 ................................ TATAGATACTAACAATAATAAGATTTAAATTGTTAG 960147 32 100.0 35 ................................ CTTATGAAATGGTATATGTAGGTCTGACAACACCA 960214 32 100.0 36 ................................ TATATAATAAAGAAATTGTATGTTTTTGGTTTTTAT 960282 32 100.0 34 ................................ CCGTTGTGGTTGCAGTAGAGAAAACAAAAAACAA 960348 32 100.0 35 ................................ CATTATTTACTTTATACGATAATTCAAATTCCGTT 960415 32 100.0 35 ................................ GAGGTTGATGATATATCTTGCAAAGGCAAGGGAAA 960482 32 100.0 35 ................................ ATGAGGCTCCAGAGAAATTTTCTACTGCAGGACCT 960549 32 100.0 35 ................................ CTCCAAAGTCTCTGATGACCTGACGGGAGTTTCTA 960616 32 100.0 35 ................................ TTTGCATCTACTACCATCGTTAATAACGCAAACCC 960683 32 100.0 35 ................................ TATAAATTTACAATATAACATTTTAGAAGATTTAA 960750 32 100.0 36 ................................ GTCAATTGTAAACGACATTATGATGGATTATTATCC 960818 32 100.0 35 ................................ TTCTATGGTGTCAAAAGTTCCCAAATATTTGTTTT 960885 32 100.0 35 ................................ GATGGCGACTTGATATTTTTACGAAAAACCAGTGA 960952 32 100.0 36 ................................ ATACACAATGTAGAGAAGCTAAGGGAAAAGCCACTT 961020 32 93.8 0 ......T................A........ | ========== ====== ====== ====== ================================ ==================================== ================== 45 32 99.9 35 GTCGCACCCTTTATGGGTGCGTGGATTGAAAT # Left flank : TACAGGCGCAACTTTTAAATTCATACATAAGAGGAGATATAGAATCTTATCCACCATTTATGATAGGAGGATAAAATGCAAGTATTAATAACATATGACGTAGAAACAATAACATCTGAAGGCAAAAAAAGACTTAGGCAAGTATCAAAAGTATGTGTTGATTATGGGCAAAGAGTACAAAATTCAGTATTTGAATTAAATATTTATCAAGCAGATTTATTAGAAATAAAAAACAAACTTATAAAAATAATTGATCCGCAAAAAGATTCAATAAGAATTTATAATTTAGGGAAAAATTGGGAGAGAAGAGTAGAAACATTAGGAAAAGATGATTCCTATAATCCAGAAAAAGATTTACTTATGTTATAATGGATATGAGAATTAGAGTTAAACATAAAAACATATAAACTAACTCACAAAAAATAGTAAAAAAGAAACAAAACTCTAAAAAAATGATTAGCTGTATTTTTTTTAATTGATGAAAATGTCTAAAAAATGCA # Right flank : TAAAAGTTTAAAATACAAATGATGCTTTTAGGTAGAGTTAATTTTTGATTTGCTCAACTGTAAAAGCATTTTTTATTTGAATTTATTAAAAAGTTAATTATACTTTAACAAATGTGTAGTCTTAATAGCTTTGTAGTATAATAAAAATAGCGTGCTATGAGATTTTTTGTAAAAACTTGTAGAAATTTATTTTATTTATTATAATACTTTTATTATGGAGGTAATATGAGATTATCAAAACTTTATATGCCAACTTTAAGGGAAGATCCTCAAGATGCAGAGATTGCATCTCACAAGTTTCTTTTAAGAGCTGGTATGATTAGAAAATCTGCTAGTGGTATTTATACATATTTGCCACTTGGTTATAGATCTATTAGAAAAATTGAAAATATTGTGCGTGAAGAGATGGATAATGCAGGGGCTATGGAAATTTTAATGTCTGCTATCCAACCTTCTGAAATTTGGAAAGAGTCTGGAAGATGGGAAAAGTTTGGACCAGA # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCCTTTATGGGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [6,10] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCACCTTATATAGGTGCGTGGATTGAAAT with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-5.50,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //