Array 1 53420-54240 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJCOT010000020.1 Erysipelatoclostridium ramosum strain DFI.1.27 PLMIMJOK_20, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 53420 30 100.0 37 .............................. GGCACATATCTATATTCTGCCCAAGCTTCTTGATAAC 53487 30 100.0 36 .............................. CCGGCATTAAATGTTGTTTTAATAGTGTGAGACATA 53553 30 100.0 36 .............................. TTAAATAGATATCCATAAAAATCTGAGCGGATAAAT 53619 30 100.0 36 .............................. GAGCCACCGCTAGCGGTGTGTGTACCATTAAGGAAA 53685 30 100.0 36 .............................. ATGATATTTTAATTGGATCTTTTAATAATCTGTATC 53751 30 100.0 36 .............................. ACTAATTTATTGTAATATGGACTGTTTACATCATCT 53817 30 100.0 35 .............................. TAATCTAATACCTCCTCGAAATACTGGCGGATTAA 53882 30 100.0 36 .............................. TCATCCTTTTCTTTTTGTCCTAAATAATCAACAACT 53948 30 100.0 36 .............................. GCCAAATGCCAGACGTCTAAAGATTGTGGATAATCG 54014 30 100.0 34 .............................. TTGGTTTCATAGCGAAATGAAGCATTAGAATTAT 54078 30 100.0 36 .............................. GATAGGATGATTCCATCTAAAGACAGTAAGATGCAT 54144 30 100.0 36 .............................. AACATTTCTTTAGCGCTTAATTCTTCTATCATTTTA 54210 30 73.3 0 ..............G.TAT.AA.G.....A | G [54223] ========== ====== ====== ====== ============================== ===================================== ================== 13 30 97.9 36 GTTTAATAACAACATAAGATGTATTGAAAT # Left flank : AAATTATTTATACCATTTTCTATAAAGGATAAATATTAATGAAAATAAAAAATCATAACTATGTAATCGTCTGTTACGATATTGGGGAAAAAAGAGTAAATAAAATATTTAAGATATGTAAAAAATATCTTCCTCATTATCAATATTCTATTTTTAAGGGTCCTATTACCCCTTCTAAATTAATTTTATTAAAAAAAGAACTAAAAAAAGCTATAAACAAAGAAGAAGATTGTGTAAGTATTATTAAATTACAGAGTGAGGATTCATTTGATGAAGAAATTTTAGGGAGTCAAAAAGAGGGAAATGAAGATAGTTTAATTATATAATTTACCAGGCTCAATTTCTTTTTAATGTCCTAAAACTGTTGGGAGAGTAAGCGTTTAAGAGAATTTTACTAGCAATTATAAAAAAGTAAAATCATTTGGTAAAAAAGTAGAAAAGTATTGATAGATATAGGTTTTGAGGTATAATAGAAAGTGTAAAATGGCTTATTTACTAGG # Right flank : AAACATGACTACTTTGTTCATATTACTATTAATAAAATATTTTTTTGTTATAATAAAAGTAAAAGTAAGTAGAAGTGGGGTAATTATGACAAATAAGTATAGATTAAAAATAATATATAAAGATACTAAATTGACATTAGACATTGAGGAAAATATTACTTTTGATGAATTAAGCTCAATTATTAATGAAAAATTAATGCTAAGTGATTCGAGAGCTTATAAATATCAAAAAGATGATGATATTATTGTTACAAGAAAAAATAGTAAAAACAATAAACTAGCAGATCTTTTAGAATTAGATCAGAAGTTAGTTTATATTATTGGTACTGGTAATAATGTTTATAGTATTAATATCATCGTTTGGGACTACATTATTGAAGCTGATAAAAAAATATTAGAGAAGTTTAATCAAATGTTGAAAAATGTCAAACAAGTACGTCCTGAACAAGTATATTATTTAAATAGTAGTCAAAGAAAGTTTATTGACGGTCTTTTGGCTG # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:0, 3:3, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTAATAACAACATAAGATGTATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [71.7-85.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.27 Confidence: HIGH] # Array family : NA //