Array 1 249869-251215 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_FQAF01000003.1 Mycobacterium tuberculosis strain 2926STDY5723657, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence                          	Insertion/Deletion
==========	======	======	======	====================================	=========================================	==================
    249869	    36	 100.0	    38	....................................	TTAAAACCGTGTTGCACTGCAACCCGGAATTCTTGCAC   	
    249943	    36	 100.0	    41	....................................	CATAGAGGGTCGCCGGCTCTGGATCACGCTCCCCTAGTCGT	
    250020	    36	 100.0	    36	....................................	TTTTTGCCTCATGCTTGGGCGACAGCTTTTGACCAA     	
    250092	    36	 100.0	    34	....................................	TCGCAAGCGCCGTGCTTCCAGTGATCGCCTTCTA       	
    250162	    36	 100.0	    39	....................................	AACACCTCAGTAGCACGTCATACGCCGACCAATCATCAG  	
    250237	    36	 100.0	    35	....................................	TTTTCTGACCACTTGTGCGGGATTAGCGGGCTTAG      	
    250308	    36	 100.0	    37	....................................	ACCAATGCGTCGTCATTTCCGGCTTCAATTTCAGCCT    	
    250381	    36	 100.0	    38	....................................	CTGAGGAGAGCGAGTACTCGGGGCTGCCGTCTGCGCTG   	
    250455	    36	 100.0	    37	....................................	GCGTGAAACCGCCCCCAGCCTCGCCGGGGCCGCCTAG    	
    250528	    36	 100.0	    40	....................................	ATGGGATATCTGCTGCCCGCCCGGGGAGATGCTGTCCGAG 	
    250604	    36	 100.0	    36	....................................	TTCGTCGACCATCATTGCCATTCCCTCTCCCCACGT     	
    250676	    36	 100.0	    41	....................................	TTGCGCCAACCCTTTCGGTGTGATGCGGATGGTCGGCTCGG	
    250753	    36	 100.0	    24	....................................	CTTGAATAACGCGCAGTGAATTTC                 	Deletion [250813]
    250813	    36	  94.4	    36	.CG.................................	ATTCGCACGAGTTCCCGTCAGCGTCGTAAATCGCCA     	A [250817]
    250886	    36	 100.0	    37	....................................	CCGGCAACAATCGCGCCGGCCCGCGCGGATGACTCCG    	
    250959	    36	 100.0	    36	....................................	CGCATGGACCCGGGCGAGCTGCAGATGGTCCGGGAG     	
    251031	    36	 100.0	    36	....................................	TGGATTGCGCTAACTGGCTTGGCGCTGATCCTGGTG     	
    251103	    36	 100.0	    41	....................................	TCCACATCGATTTCCTTGACCTCGCCAGGAGAGAAGATCAC	
    251180	    36	  97.2	     0	.........................A..........	|                                        	
==========	======	======	======	====================================	=========================================	==================
        19	    36	  99.6	    37	GTCGTCAGACCCAAAACCCCGAGAGGGGACGGAAAC	                                         	       

# Left flank :   TTCAGTACGCCCTCGACTTGCAACTGCAAAGCCTCGTGCGTATTATCGAAGCCGGGCACCCGTCGCGGCTCGTCGATATCGATATCACCTCCGAGCCATCCGGAGCCTAAATGCCCACTCGCAGCCGTGAGGAGTACTTCAATCTCCCGCTCAAAGTGGACGAGTCCAGCGGCACTATAGGCAAGATGTTCGTCCTCGTAATATACGACATCAGCGACAACCGGCGGCGGGCTTCACTTGCGAAGATCCTGGCCGGGTTTGGCTATCGCGTCCAAGAGTCCGCATTCGAAGCGATGCTGACGAAGGGCCAGCTCGCGAAACTAGTTGCACGTATCGACCGCTTCGCCATCGACTGCGACAACATCCGGATCTATAAGATAAGAGGTGTTGCGGCAGTTACGTTCTACGGAAGGGGACGGCTTGTCAGCGCAGAGGAGTTTGTGTTCTTTTGACATCATCAGCAGGCATTGTTACCACACGCTGGACGAATTGTCCATAGA
# Right flank :  TCGTCGACGATCGCGTCGATGTCGATGAACCGCCCCGGCATGTCCGGAGACTCCAGTTCTTGGAAAGGATGGGGTCATGTCAGGTGGTTCATCGAGGAGGTACCCGCCGGAGCTGCGTGAGCGGGCGGT

# Questionable array : NO	 Score: 6.22
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:-0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTCGTCAGACCCAAAACCCCGAGAGGGGACGGAAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     F [12,2] Score: 0.37/0.37
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  F [-7.70,-6.40] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-5] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: F [55.0-38.3]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [1.42,0   Confidence: HIGH] 

# Array family : NA
//