Array 1 401018-401286 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP051180.1 Ferrimonas lipolytica strain S7 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 401018 28 100.0 33 ............................ TCAATGGTACGGAGCCGCCGGGGTGGAAGCTAT 401079 28 100.0 32 ............................ TCATCGATGCTCGGGTTGGTCGGGCACAATGT 401139 28 100.0 32 ............................ AGTACAAAAGTGCAATTCTGATACAGCAACAT 401199 28 92.9 32 ..............G........A.... GACAGCTATCGATCAGCGGCATCAGCATCAAT 401259 28 75.0 0 ..A......T.........A...AT.CT | ========== ====== ====== ====== ============================ ================================= ================== 5 28 93.6 32 GTGAACTGCCGTATAGGCAGCTGGGAAA # Left flank : TGATGGAAAGAGATCAACTTTTTGAACGCTCTAAACTTAAACCAGTTCCGCAGGGCTGTCGGGAGATTCAGTTTAAGAGAAATCAAAATATCGCGAAGTGCTTTCCCGGTGAGAAACGTCGAAGGTTAGAGCGCGCAAAGCGCAGGGCTGAAGCACGAGGGGAGGTGTTTGCTCCAGCAGAAACGGGTCAAGCTAGCCAGTTAGAAGCCTTCCACAGCATATTGATGCATAGCAAGAGCAGTAGCCAACAATATCTTCTTCATATCCAAAGAAAAGTTGGATTGGAGTTGGTATCGGAAGATTTTGGTCAATATGGCTTGGCGACAAATTTGATACATCAAGGGACACAGCCTGAGTTACCGCGTGGACGAACCCTTTTTGATTAATATGATTATTATCATTAATTTTCAGTGTCTTAATGGGAGTCCCGAAAAGAAGGTTTTCGAGCCGTCAAGGGGCGAAAGCTATGTCCCACGGAGGTTTTGATACTAGACTTGACA # Right flank : TAGCTCCCTAGTAAAGCAACTAAGTCCAGAAGTACATTGCTGTCGAACCTGAATAGATTACTATGAAGTTCTCGATGCCCACCTGGGCATTTTGTTTGGAATGCGGAATCACGTTGCCTGCTCAGGTACGGGCTCAGAATTTGACCTTCAAAGGTTTCTCTGGTCAGAGTCTGGCTAAAATGGAGGAGTCGTTGGCATGAGTTCGCAGCGACAAACTAATCGCCTGCAGGTGCTGGGGAAAGGCCAGAAAAGGTATCTTGTGTTGAATGAGATGTCGTCTATATCCGTTATCATTGACTCGAAATGGAAGGTTTTATGTCCTCAAAAAAATCTACGTCTCGAAGTTCTGGAAGAGCTTACAAGGAAGAAAGTGATCGCGTATTGCTTGCACGTAGCGGCTCAACAGCAGGTGTAACGTTCAGCCCTTCATGCTCGAGCTCGGAGTTGGGCATTTATGCCACCTTGATGGCTCTGAAAAAGCTCGGCAGGGCAACTGACAG # Questionable array : NO Score: 2.77 # Score Detail : 1:0, 2:0, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGAACTGCCGTATAGGCAGCTGGGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [50.0-55.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.15,0 Confidence: HIGH] # Array family : NA // Array 2 433153-434178 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP051180.1 Ferrimonas lipolytica strain S7 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 433153 32 100.0 35 ................................ TTGGTTTGCAGGCTGTTGAAACCGAAGCGCTTGAT 433220 32 100.0 35 ................................ ATGAACACGCGCTCGCGAGCGAAACTGTGGTCAAG 433287 32 100.0 34 ................................ AGAATTCGCAGCATCGAAATCCAATCTAACGTCG 433353 32 100.0 33 ................................ ATTAATGAGCATCGGTCAAGCGGCACTAAAAAT 433418 32 100.0 33 ................................ ACGTGACTGACAGCGAAGGCTATCCATCAAACG 433483 32 100.0 34 ................................ TTTAAAGCCATTAGCCTTAACGAAGGCTAAAACT 433549 32 100.0 34 ................................ AAGTTCTGCCCTCGCATTTAACGCGGGTTTTTGG 433615 32 100.0 33 ................................ TAAAAAAATATATATTTAAGTCCAGTCAAAGTT 433680 32 100.0 36 ................................ AGCAGCCCATTTAACAAACTCACAACTACGCTTAAT 433748 32 100.0 36 ................................ AGCAGCCCATTTAACAAACTCACAACTACGCTTAAT 433816 32 100.0 34 ................................ GACGCTTCGCTTGTCGGCGCAGTCGCTAGCGGTG 433882 32 100.0 34 ................................ TTGAAAATATTAACTTCTCCTTCGGTCGATATTT 433948 32 100.0 36 ................................ GCAAGTCACGAAAAACAACGCGACCCTTGACGATAT 434016 32 100.0 34 ................................ ACTTTCGATTGCTTGTCGTTCGTATGGATCTTGT 434082 32 100.0 33 ................................ TATAATCAATTACCAAGCATCCCCTTATGTCAC 434147 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ==================================== ================== 16 32 100.0 34 GTCGCGCCCCCTGCGGGCGCGTGGATTGAAAC # Left flank : CCATTTTGTATGCGCTAAGGAAAGCGAATTATGATGGTATTAGTCACTTACGATGTGTCATTTGAGGATGGCAATGGTGCTCAGCGACTGCGCCGATTAGCTAAGATCTGCTTGGATTACGGTACCCGGGTGCAATATTCGGTATTTGAGTGCGACATCGATTACCAACACTGGCCGCTATTCAAAGCCAAATTGCTTGAAACAATGGATCCCGCGGTCGACAGCATTCGATTTTATAAACTGGGTAAACATTGGCGTGATAAAGTGGCGCACCATGGTGCCAAGCCCGCCCTCGACATTTTCCAAGATACCCTTCTGCTCTGAGCGCTAACCGATTGTTCTCATCAAAATTCCGCTTGGTTAGCTAAATGATAAATATATGATTTTTATTGTTTTTATTATTATTTCTGCGCCTCGTTTTGTTATTGATCACATTGTGCTTTGGGGTTAGCAAAACTGGCCAAATTTCGTTAGGCTGGATGGGCCTTTACGATAAGGCT # Right flank : CAAAGCTGAGGCTTGCTGTCTTACCGTTTTCGCTCTCTGGCTTCATCACCATCACATTACCTAGTGAACTGAATGAATTTGAGAGAAAAAGTACAACCTATCAGTGCCTTATAGATGCTGAAATTAGTGTTATCTCAAGCTCAATGATCTATAAAGAAACCGCCAAATACGAAGGGCTGATGCGTTATGTAATGCAGCGTTCGTCTGAGTATCTTTACGCCAGTAGGGATATGGCGTTGATGCGGTCGCTACTTAAAAAGAGAGAAAACATCGCATTGCGGCTAATGGTCTTGTGTGTCTCAATGGAGGGCTATTGTTTCAACCTTACCATGGATGAAATTAGCCTTATCAGCGGCGTCAGCCCTAAGTACTGTGCTGATTACATTAAAGATCTAGAGCAGCGCGGCATTTTGAAAAAAGGCTACCGTACTATCTGCATTCGCGATCTCGAACGGCTAATGGCTGAGATCAATCCTCAGGTTTTGGCTTTTTTTGGCAAT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGCCCCCTGCGGGCGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCGCCCCGTGCGGGCGCGTGGGTTGAAAC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-6.80,-7.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [53.3-51.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9,0.74 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //