Array 1 45176-44843 **** Predicted by CRISPRDetect 2.4 *** >NZ_BCTG01000020.1 Herbaspirillum chlorophenolicum NBRC 102525, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 45175 28 92.9 33 .....T..T................... CCTGCTGGCCTGCGAGTTGATCCTGCAGTTGGC 45114 28 100.0 33 ............................ CTGGGCCAGGATGGTGTCGCTGCCGTCGTGGAG 45053 28 96.4 32 .........A.................. GGCCAGCTACTGGGGAAGCCCCGCCTCAACGC 44993 28 100.0 33 ............................ ACAGCGTGACTATCCCGAATAGTATGCCGACCC 44932 28 89.3 33 ........T.......A........A.. TTCTTGAATGCCATGTATCGGACCGGCATATGG A [44910] 44870 28 82.1 0 ..G..T........T........T.T.. | ========== ====== ====== ====== ============================ ================================= ================== 6 28 93.5 33 GGTTGCCCCGCGCACGCGGGGATCGGCC # Left flank : GCTGAAGTCGGCGCACGGCAATATCAGCAAGGCCGCCAGCCTGCTGGGCATCACGCGCGCGCAAATGGATTACCGCACCAAGAAATTGCCGCAGCCGCGCTGAGCGGGAGATCGGGCCGAGGGGCTGGACCGCGCTACCGCCACTGGGCCCTCTCAGAGCAGCTTGTCGAGGGTATCGGCAAGTTGCGCACGCGGCGCCGGTGGCGTGGCTCGACTGCTTCAAACGGGTCGAACACAGCGGACAATTTGATGGTCACCTGCGCTTTGGGGAAAAACTGGAAATTGGGAAGACGTGGCACCCGCTGGATGACATCTGGCGATAGATGTGCTTCTCGAACCGGGCGCTCTTTTGCTTTTTGACATGAAGCAACTCCGTTAGGTGGAGTTACGTATAAAACAGAAAGAAATGTTGGGATTTTCCCAAACTCTTCATGTCACGTCGAGCCTTGAAGCATCATGGCCTGAAAGGCGTATGAAGAGTGGTGCGGCTGGATGCAAGT # Right flank : GCGATTGGCATACAAAGTGGAACGAGGTATCGAAGGGGGTATTATAAATTCATGAACCTCTTTTTAAGAATTTTCTCCTATGTCGATCCAGGAAAGTTCGGTAGAGGTAGCCGTAAATGTACAGCTTGAGCAGAATGGCGGGATGGTAGGCCGGCCGGCCCGTCTTCGCCGGCGCCACCCGAGCAAAACCCAGGCTGGCAAGATCAAGCTCGTCGACGAACACATCGACGACACGAACCGGATTATCTTCGGCCACGTAGTCGTCCAGAAGCTCGGGCAGCAGCGTGCCTTGTCCGCGGTCCTCGCCCTCAATAAAGCGCTTCATTTCGCACCCGTAGTGATGAGATACTGGCTTAACGTTGACTACGCTGCCGCCGTTTACACGTCCCTACGTTTTTACACAGTCTGGGCCGATTGCAGACCTAGTGTAGCGTCCGCTTACAACCTATAGCGCTCATTGCGATCGAACTGATCAACGAGCTTGTACAGTAAACTGCACT # Questionable array : NO Score: 2.62 # Score Detail : 1:0, 2:0, 3:0, 4:0.67, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGTTGCCCCGCGCACGCGGGGATCGGCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [3,2] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [9-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [56.7-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,0.78 Confidence: LOW] # Array family : NA //