Array 1 1043-3388 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADCOC010000063.1 Klebsiella pneumoniae strain KCJ3K681 NODE_63_length_29163_cov_5.445998, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 1043 29 100.0 33 ............................. GCCCGCGCGAACCTGGGGCTGGGAGATTCAGCG 1105 29 100.0 33 ............................. TTGGCGGTCGACGGTGGCGAACTGCCTGATCAG 1167 29 100.0 32 ............................. GGGGGGAAATCAAGGTCAAAGTTGAGCTGGAT 1228 29 100.0 32 ............................. CCTCGATCATTCTTGCCAGTTGGGAGTCGGAC 1289 29 100.0 32 ............................. CACCTCGCCTATAAATCGTACCAGCCTGACAG 1350 29 100.0 32 ............................. TCGTAGCTAATAAATTCGTTGCTCATTTGAAA 1411 29 100.0 32 ............................. GCATCGCTCGCCTCGTTCGGTGCTAACGCTGG 1472 29 100.0 32 ............................. CGGCTGCGCTGTTGCACATAGCCGCTCAACCT 1533 29 100.0 32 ............................. CGGCCGCGTTCTCCCCTGTGGGAGGGGTGGGG 1594 29 100.0 32 ............................. GAATTTATTGGGAGGTGATAGCTCTGGCAGGT 1655 29 100.0 32 ............................. GGTATGCAGGGCACACGCCAAAATAATTTTGC 1716 29 100.0 32 ............................. CTTTTCATTTTCTCATGACCGCCACCATTTCG 1777 29 100.0 32 ............................. AATACCGGCGGCAGGGATTTACGCCCGAGCAG 1838 29 100.0 32 ............................. CGCACGGTGCATTCACGCCCGCGCGCCTGTTT 1899 29 100.0 32 ............................. GTGACGCGCTGCAGTTTGCCAAAACCCTGCCA 1960 29 100.0 32 ............................. ATTTTGCGTACGCTCTCCCACAGCTGATCGTG 2021 29 100.0 32 ............................. TTTCCGGCAGCGTAGCCAACCCGGCCAACCGT 2082 29 100.0 32 ............................. CGGATTAAACGTAAGGCCGCGCGCTGGCGTAA 2143 29 100.0 32 ............................. GTGGTTTGTTACCGTGTTGTGTGGCAAAAAGC 2204 29 96.6 32 A............................ GGTTTATAGAGGCTGAGGTATTCACAATGCGC 2265 29 100.0 32 ............................. GGCGCCGGCCTGATCACTATCGGGTAACGGTG 2326 29 100.0 32 ............................. GGCCTGAACCAGAGCACGATCTACACCTGGAA 2387 29 100.0 32 ............................. ATTGGGTAGAGCAGGCGAACGGATGTCTTTTT 2448 29 100.0 32 ............................. AAGGTTGACCTGTTGTCGGCAACCATCGAGCC 2509 29 96.6 32 .........A................... GAGGCGCGCGTTGTCGTCGGTGAGATGCGCGA 2570 29 96.6 32 .....A....................... GCCATTCGTGCTTCTTCGCTTTGCTGCATCCA 2631 29 100.0 32 ............................. GAATATAAAACCAGATTCCATATAGCCCTGTG 2692 29 100.0 32 ............................. CCGGTTACGGGGATGACTGCAATTCGCTCCTG 2753 29 100.0 32 ............................. TACAGGACGCACTGGCTGCGAAGCCGTTCGCG 2814 29 100.0 32 ............................. TCGCTCTGTGTCATACGGTTATTAGCCCTGGA 2875 29 100.0 32 ............................. AATTTGCTCATAGAATTGAGACAGTAAACTTT 2936 29 100.0 32 ............................. CCGAAATGGATACCGCCGCGATTGAGTATTCG 2997 29 100.0 32 ............................. GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA 3058 29 100.0 32 ............................. GCGGCGTCAGGTGTGTGGCAGAAAATTATTGC 3119 29 100.0 32 ............................. TCGTCTGAGTTCCGGCTTACGCCGTGCCGACA 3180 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 3241 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 3302 29 96.6 29 ............T................ GGGTTCACTTGGGTGAAACTGAACTAACT 3360 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================= ================== 39 29 99.0 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : TGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGTG # Right flank : CGTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTCTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCTTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTGGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATT # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //