Array 1 1115579-1117861 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP056307.1 Klebsiella pneumoniae strain RHBSTW-00832 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 1115579 29 100.0 32 ............................. TTTCTTGATGCTATGTTGAAGAAGATGAGGGG 1115640 29 100.0 32 ............................. ATTTGGCAGAGGCTGGTCGTGTCGATGTCGAA 1115701 29 100.0 32 ............................. ATACGTCTGTTACTTTGCTATTATTAGAAAGC 1115762 29 100.0 32 ............................. TTTCCTGTACTGTTCAGTTGCATAGTCCAGCA 1115823 29 100.0 32 ............................. AAATCGCAACGCACATCGAAGCCGGAAAAGTT 1115884 29 100.0 32 ............................. AATACACGGGCGTTCAGGTTAAATATTTTGAC 1115945 29 100.0 32 ............................. TGTCATACGACCTGGTAAACGACCGTTCCATG 1116006 29 96.6 32 ..A.......................... GTTTTGTCGACAAAGTACGTCTGCTCTCTTGA 1116067 29 100.0 32 ............................. GTTGTCAGTCAGGGAAAATCTATCCGCAGGGG 1116128 29 100.0 32 ............................. TGATTGTCGCTATACCAGCGCTCAAGGAAAAT 1116189 29 100.0 32 ............................. GTCAGATCACGTCAACCACGCTTGATTTTACC 1116250 29 100.0 32 ............................. CTCACTAACGCCGTTGCCTGCGATAGCTGATG 1116311 29 100.0 32 ............................. GTGATCGGCCCGGCAATGCGTGAGCTAATCAA 1116372 29 100.0 32 ............................. CGTTTAACGCAGTGCGAAAAATTACGACACCA 1116433 29 100.0 32 ............................. AACTGAATGTTCCAAATCCGGTTGGACGACCA 1116494 29 100.0 32 ............................. TTCAGCAGCGCGCTCGTCCCCCTCCTGTCGGA 1116555 29 100.0 32 ............................. CTCTACTACGATAACGGATCCCACGCGGGCTG 1116616 29 100.0 32 ............................. GCTGCCAGCCCATTCCGTAATTGCCTGTTTCA 1116677 29 100.0 32 ............................. CAGTAGCAGCCATCGCTGAGGTGAAGGGCTGG 1116738 29 100.0 32 ............................. GCGAATATAGGCATTAATGCTTTTAATAATAT 1116799 29 100.0 32 ............................. CTCCGTCACCAGTTCTGTGCTATCCGGCACAA 1116860 29 100.0 32 ............................. CTCGGTGACCGGCAGATCGTTTTGAAACACAT 1116921 29 100.0 32 ............................. CGTCTGGCGAGGTTTACGACGAGCTGACGTTC 1116982 29 100.0 32 ............................. TCACGTTTGCAGAACTCGCGGAGGAAGAAGAA 1117043 29 96.6 32 ..A.......................... AACGTAATTGGCTTACGGGGCGGTCGGCACAA 1117104 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT 1117165 29 100.0 32 ............................. TGGGTAGAGGTTAACTGGTTATTGGTCATTGA 1117226 29 100.0 32 ............................. ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 1117287 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 1117348 29 100.0 32 ............................. CTGCAGGTAAATGACTGGATGGGGGAAGAGGT 1117409 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 1117470 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 1117531 29 100.0 32 ............................. GCAATCCCAGAGCGCGAATATCTTGGGCTCTC 1117592 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 1117653 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 1117714 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 1117775 29 100.0 29 ............................. GGGTTCACTTGGGTGAAACTGAACTAACT 1117833 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================ ================== 38 29 99.2 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT # Right flank : CGTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGAGCCATCTCATAGCCTGTCAATT # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //