Array 1 133880-136816 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAFBFA010000007.1 Gracilibacillus alcaliphilus strain DSM 102988 Ga0454078_07, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 133880 36 100.0 30 .................................... AAATATAATTAAGTTGCACAAATCCATGGG 133946 36 100.0 30 .................................... AAAAAACGAACAGAGACAGCCACAGTCGAA 134012 36 100.0 30 .................................... ATAAATAGTTTATTCATGTTAAAAGCGTTT 134078 36 100.0 30 .................................... TGGAGATATGGATGAGTTTAAGTCAAATCT 134144 36 100.0 30 .................................... ATGGTATTGGCAGGCAATCCATTTAAGAGA 134210 36 100.0 30 .................................... CGCCCTAGAGGAATCAGTTTCCTCAGTATA 134276 36 100.0 30 .................................... GTGAGTGACTAATGAATAAAGTACATTGCG 134342 36 100.0 29 .................................... CGCTTTAGTTCCTCGATTTGCCTGCGTGA 134407 36 100.0 30 .................................... TGGAGAATATGCAACCTTTAAACAAATTAG 134473 36 100.0 30 .................................... TGAATCAATTAATCTTAATAAAGAAAAAGA 134539 36 100.0 30 .................................... AGCTAGAGCTAAAGCTCCTGATTGGCATAA 134605 36 100.0 30 .................................... GTTCCACATGGCATGTGTGGGTAATAAATT 134671 36 100.0 30 .................................... GTAATATCCTAAACTAATTTCTTTACCAAA 134737 36 100.0 30 .................................... TTCCGGCTCTCTGCCAATTAATACTCTTAC 134803 36 100.0 30 .................................... TACAACACCAATACGCATGAATGGTGATGA 134869 36 100.0 30 .................................... CTTGTAGCAGCAAAGAAGGTCTAGACCGTA 134935 36 100.0 30 .................................... GAAAAACGAACAGAGACAGCCACAGTCGAA 135001 36 100.0 29 .................................... CGTTGCCGCACGCTCCATACTCCAACCAA 135066 36 100.0 30 .................................... ATTGTTTGTATTCACGCCTGGTATAAAGGG 135132 36 100.0 30 .................................... CAGTTCGATCGCCTCATCTTCCGCATTGGC 135198 36 100.0 30 .................................... TGAGTAGTAGGCGTTCATCTGTTGGATAAA 135264 36 100.0 30 .................................... GATAGTGGCAGGCGTAATGACAATGGTGTT 135330 36 97.2 30 ................T................... TTTTCAATTAGATGTCATACAAACATGGCA 135396 36 100.0 30 .................................... GTAAGTCGCCCTAGAAGTTCGGTAGGTAAG 135462 36 100.0 30 .................................... TCCCATCGAGCAAGTGGTCGAGGTTCTTCC 135528 36 100.0 30 .................................... ACATGGGCTATTAAATGTTTAACATCTGGA 135594 36 100.0 30 .................................... ATAAGACAGAGTACCGAAAAACCAGAATTC 135660 36 100.0 30 .................................... ACCGGTAATGATGTCTAATGCCATCAGCAG 135726 36 100.0 30 .................................... TAAACCTATGGAGTTAGGAACCAAGGTTAA 135792 36 100.0 30 .................................... GAACAAGTCAAAAGTTAATCCCCTTTATTT 135858 36 100.0 30 .................................... ATCAGTGATAACCCCTTTTTCACCAGCTAG 135924 36 100.0 30 .................................... AAAAAACGAACAGAGACAGCCACAGTCGAG 135990 36 100.0 30 .................................... CTTTGACGGCGTGTCAAAAAGCGCTTTTGA 136056 36 100.0 30 .................................... CGACCAAACACGTTCATATCGACGTAATTC 136122 36 100.0 30 .................................... ACAACTAGGTTCGGGTTATTCGGATCGCGT 136188 36 100.0 29 .................................... CTTAGCAGCGGCGGTAGGGTACTTATTCG 136253 36 100.0 30 .................................... ACGAGCCTGTCAATACCTCGCCCATAAATC 136319 36 100.0 30 .................................... ATTTTTTCGTTTGTTGGTTATACCCTTTAT 136385 36 100.0 30 .................................... GTAAATAGTGTGCAATCCCTGTCTACTATC 136451 36 100.0 30 .................................... CCATGATTGATAATTTACTAGATAATCGCG 136517 36 100.0 30 .................................... TAACTCAGACGGAGAAATAGAGCGATACAA 136583 36 100.0 30 .................................... TTCGCCAACACGCTTAATGAACGGCTTGCA 136649 36 100.0 30 .................................... CTCTTGCTCCGCCTTAAGTGGAAGCATTAG 136715 36 100.0 30 .................................... CCAAATCCAATCATGGCCAAGATAATTGGT 136781 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 45 36 99.9 30 AGCATATCATACCAAGGTTTATAGGGGAACTATGGC # Left flank : AACTAAAATCTTTGGAACTACACGTATATGAGTAGATTTATGAGAATTTTAGTATTTTTTGACTTACCCGTTGTTGCCAAACGTGAGAGAAAAGCCTATTCACAATTTCGCCGATTTTTACTTAATGATGGTTATGTGATGCTTCAGTATTCTGTTTATTATAGGATTTGTAATGGAGAGGAAGCAGTTCAGAAACATATGAAACGATTAAGACAGAATATTCCTCCGGTGAATGGAGCAATTAGAACATTGAAGGTCACGGAAAAGCAATTTGAGAAGATGGAGATATTATTAGGGGATGCCAGACCAAATGAAGATATCGATTCAAAAATAACAGATTTTTTTTAAAGAAAGCTTGCCAAAAGGCGGCTTTTTTTATTGGATCAATGTTCAGTTATAAAAATTAAATCAATTTTCCTTAGAATAAAGGATTTTTGAATTGCTTTTTGGGAAAAAAATATGCTGCGACCCCTTGATTAACAAGGGATTGCTAGGGAAAT # Right flank : CGTCGCCCTGCAACGTACCTGTAGCAGTACAATCATTACTGGATCAAGCAAATTTTAAGCTTTCTAGTATTATTTTGTATAATATGAAATTTAGATAACTATGGATGATGGGCATGCTTGTTATTCTGAGTATTTTATAAATCATAGCTACCTTTGCTTTTGTCCAATGATTAATAAAGCTTGTTTTAAAATGTTCTTCTCTTCTTCTAAAAGTTGTATTCTCTCATATAAATCGTCATGTTGCTGTATCTTAGGAAGAATATTTTTTTCTTGTTCATAGTACACTGAGCTTCCGTACCGATTTATCCATCGATCAAAAGTAGATGCGTTTAGTTTATTTTCTGTGATAATATCATTGAATGGTACACCATTTAGGTATAATTGCACCATCTGTTTTTTGAATTTAACTGTAAAAGTTTTTCGTTTGAGTTCAGTCATTTAAATCACCTCAATTTAACTATTTTCAACGTAATGAAATGTAAGTGCTTCAAATATTTTTA # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : AGCATATCATACCAAGGTTTATAGGGGAACTATGGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.70,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [60.0-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0 Confidence: MEDIUM] # Array family : NA //