Array 1 70251-69951 **** Predicted by CRISPRDetect 2.4 *** >NZ_PDKJ01000010.1 Halarcobacter ebronensis strain CECT 8993 NODE_10_length_111778_cov_47.3291_ID_2718, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 70250 36 100.0 30 .................................... ATTTTTGTCATTTTAAACCTCCTCAGGTTC 70184 36 100.0 30 .................................... TACTATGTGCAACAATGATGTTTGCTGCAG 70118 36 100.0 30 .................................... TGTTATATTCTTAGTTAATATGCCTTGTCT 70052 36 97.2 30 ...........T........................ CCTGAATTGTCAATTTCTAAGCCTGAGTTT 69986 36 88.9 0 ............................TG..TT.. | ========== ====== ====== ====== ==================================== ============================== ================== 5 36 97.2 30 ATTGGATATACCCCTAATTTGAGAGGGGAATAAAAC # Left flank : GATGAACAATTAAAACACAATGACCACTACAACTTTACAACTCTTTTATCAGAATATTTTAATTTTGACCCTAAAAAGAATAAAAAATATGAAACTCTAACAATACTTAGAAATAGTATTTCCCATCAAAAAATAGATAACTTAATATATAACCTAGATAAAAATAAAATCTTAGAACAAAGGGTAAAAATAGTTGAACTAATTAAAGAACAAAGGGATATAAAAGAGACTCTAAAATTTGACCCAATAAATGACTTTACCATGAAAACAGTACAACTTCTAAAATCTTTAGAAAATCAAAGTGAAAAAAGAGATAAAATAGAAGAGATACTAAAACAGCAAGATTTATCTGCAAATGATTTTTATAATATTTATAAACTAAAAGGCGTAGAATCAATAAAAAAAGAGCTTTTTATAAGGCTTGGAAAGACAAAAATTGAGGAAAAAATTCAAGAGGATATAGCTAAAGGCTCTATTTAATGGTATGTGGTATAATACCT # Right flank : AAAACCTACGGTTTTAATCTACGCGAATAGTTTCCTTGTGACATTAGGTCACAAGATTTCCTTTTCTTCTGTACACACATGCGTGTGTCACGCTTACAACCTTTTTACCTGCAAGCAGGATTACATGTTGAAAAAGGTTGCGCCTTGTGCTTGCACTCTCTTTGAGAAAAGCAACCAGACACATTGTTAAAGGTCTTACAGACTTCCCTCTATTTTTACTCTTTAAAGCTAAGTCTGGACTATCCTAGCCGCAAAGTTTAAAATAAAAATTTATATTAGAATATTTTGATTGGCGATTATTTCCAACATCTGCAACTGCCGAAAAAATATAAAGATATTTATGATAAGCGTGAGGATTGTTTGAATAATAAAAAGAGACAAATTCTCTTTTTATTATGAGTTCTGCAACGCAATAAATATTTTTATATTTTTGAGGGTATTTGCTTTAGCAAACAGTGAAGCCGTTGGTAGTTTTTGCAATACTTTTTTCTATAAAAAAG # Questionable array : NO Score: 2.92 # Score Detail : 1:0, 2:0, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGGATATACCCCTAATTTGAGAGGGGAATAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-7.20,-8.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA // Array 1 5172-1643 **** Predicted by CRISPRDetect 2.4 *** >NZ_PDKJ01000017.1 Halarcobacter ebronensis strain CECT 8993 NODE_17_length_53288_cov_44.6502_ID_2732, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 5171 36 100.0 30 .................................... TTGTAAACACATCATAGAAGATAACATCGT 5105 36 100.0 30 .................................... AGAGATAGTTATTATGCAAAATCAGAAAAA 5039 36 100.0 30 .................................... CCCGTTTGAGCAATTGCAATAGGTAAAACA 4973 36 100.0 30 .................................... AACTTTTTACAAAAATAAATTAAAAAAATA 4907 36 100.0 30 .................................... TAGTTGGAAGCGTTACTTATTGGGTGGCTA 4841 36 100.0 30 .................................... TAAGAAGTGGCATGTCTATACCAAAAGCTG 4775 36 100.0 30 .................................... CCAATAAAAGGAAGATACCTAACAAGTGAT 4709 36 100.0 30 .................................... ACTGCTATTGTTGGGGAAAATGGAGCTGGG 4643 36 100.0 30 .................................... TCAGCTGTAATCTGAAACTCATCTTTTGTA 4577 36 100.0 30 .................................... AGGTATTTGCTTCATATGCTGACATTACTT 4511 36 100.0 30 .................................... TATACTTTGGGAGTTTCACAAAGTTCACCA 4445 36 100.0 30 .................................... ATTTCATTTTGTTTTTTCCACATCATAAAA 4379 36 100.0 30 .................................... CTAATCAAAATTTTTTAGCTGGGGGAAATA 4313 36 100.0 30 .................................... AAAAGTGAAATCAAAAATCAAGGTGGTGAT 4247 36 100.0 29 .................................... TACAAATTTTTCTTCATCAACTAAATAAA 4182 36 100.0 30 .................................... CATGACAGCACTTATCATCAATACAGGTGG 4116 36 100.0 30 .................................... AATATGGAGGTAATCAATAATGAGTGGAGC 4050 36 100.0 30 .................................... TCTCTTTTATTTTCTTTAATATTTAATCCC 3984 36 100.0 30 .................................... AGGGGTGACATTTTAAAAACTTTATTTAAT 3918 36 100.0 30 .................................... GGTAATGATAATGTTGATGCTCTTTATACA 3852 36 100.0 29 .................................... CTTAACAGCAGTAACACGAGTTAATATTT 3787 36 100.0 30 .................................... TGTTGTTATTTTCATCACCCCCATAAAATG 3721 36 100.0 30 .................................... TAAGCCTTGCCTACCCAATAAGTAACACTT 3655 36 100.0 30 .................................... AAACAAAGATAGAAAAGAAATAGCAAAAAT 3589 36 100.0 30 .................................... GATTTGATTTTTCTTAAGTCATCATCATTG 3523 36 100.0 30 .................................... TAGTTTTAGGAAACAACCTTTCAATCATTT 3457 36 100.0 30 .................................... TGGTACTGCTATTACAAGAGTTGCAAACTT 3391 36 100.0 29 .................................... CTCTGCATTATAGAAACAAAGCTCTTTTA 3326 36 100.0 30 .................................... AAAGGCAAGAAGTAGAGCATACAGTAAGTG 3260 36 100.0 31 .................................... ATTGACCATTTATCATAAACCCAATTTAACG 3193 36 100.0 30 .................................... TCATATTTACTTTATCTTTACTTAATCGTT 3127 36 100.0 30 .................................... ACCATTTATTATTAAAAATAAGTTCGCTCA 3061 36 100.0 30 .................................... TAATACCTTTTTTAGAATCTCAAAGAAAAA 2995 36 100.0 29 .................................... ACACGTCCAAGTTAAAATCAATATTTGTG 2930 36 100.0 30 .................................... ATTGATTATATATTGCCTGTTAAGAAAAAA 2864 36 100.0 30 .................................... GAGCAAATGATGCAAAAGCTGCTGGACAAA 2798 36 100.0 30 .................................... ACTAATTTAAAAAAAGAAGATAAGATACAA 2732 36 100.0 30 .................................... ACATATGCTTTTATCATTTTAAACCTCTTC 2666 36 100.0 30 .................................... GAGTAATGGACTTTACATATGCAGAACCAG 2600 36 100.0 30 .................................... AATTAACAGAATGTGACTTCGCCATATACG 2534 36 100.0 30 .................................... CAAGCCTGGCAACGATACTCAAAGAAAGTT 2468 36 100.0 30 .................................... CATTACTGTATCATCGTCTTTATCTAAAAC 2402 36 100.0 30 .................................... AAATAGCACCATCTTTAAACTCATCTACCT 2336 36 100.0 30 .................................... CCTTTTTGCTTTTTAGTTTCGGGCTTAATA 2270 36 100.0 30 .................................... TATAAGGTTAAGCGTTTAAATCAAATAAAG 2204 36 100.0 30 .................................... TATGAGTTCTATATCTTCTTACTCTTTCAG 2138 36 100.0 30 .................................... CCGTAAAGCAATTTAAAATCGCAAAAGACT 2072 36 100.0 30 .................................... CCGACGGAAACTTCTCCTTTAGTGCAGATA 2006 36 100.0 30 .................................... CAAAATTTTGCAGAATATCTTTTCTATTTC 1940 36 100.0 29 .................................... CCGACGGAAACTTCTCCTTTAGTGGCTTC 1875 36 100.0 30 .................................... GTGCATAAGTAACAACTGTATTAGCGAATT 1809 36 100.0 30 .................................... TAGTTAATAAAGCATCTAGTTTGTTACAGG 1743 36 100.0 29 .................................... TGATTGTGAAGCAGAAGCTTTTAACATCT 1678 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =============================== ================== 54 36 100.0 30 ATTATATCAAATGGGGATTTGAGAGTAGATTAAAAC # Left flank : GATAGTAAAAAGGTAATTGTTTCAAACTGTATGAAGGCGATGGTGGCAAATTATCAGTCAATTTGTTTATTAAAATGTGAAGAGTTAACTTTATTTGAATTATGACTAATATAAAAGAAATAAGCAGGTACAGAAAAATGGTTTTATTTACAATGTTTGATATGCCCACAAATACAAAAAAAGATATAAAAAAATATACAAAATTTCGTAAAAAACTTTTGGAAATGGGATTTATTATGTTCCAGTATTCTATTTATATAAGATTTTGTAGAAGTTTGGTTATAGCACAAAAATATGAGAAAAAAATAGAATTGGTAGCACCTGTGGGTGGTTCTATAAGGGTTGTAAAAATTACAGAAGCACAATATAAAAATATGCTAGTTATTGAAAATTATCGAGAAAAACCAGAAAAAAAATTACTAAAACAAACACAAGCAGTGCTTGTTTTTTAGTAATAAAAATGCCATAAAAGCCTAAAATACAGTGTTCTAAGCTACTCT # Right flank : TTTATTTATTGTTATCATATTTATTAAAGTAAATTTAATTAATCCATAAAATTATTTTGAATAAAATAATAATATGCATGATATTAATTAATTAAATAGTTATTCTCCTTTGAATAGCTATTAAAGGAATTAATATGTTCAAAAATATAAGTATAAAGATGAAGTTGATAGCATCTTTTTCAATGGTTTCAATATTTGTTGCATTCTTATCTATTTATAGTGTGAGTGGGATTAGTGAATCTTCTGATGGTTTTTCAAACTATAGAGCAATGGCGAAGGATAGTTTGTTAGCAAGTGGTGTTCAATCAAATATGTTAATGTTAAGAATGAATGTCAAGGATTTTTTAAATACCTCTTCTGATGTAGATATAAAAGAGTTTAATGATTATTATAAAAAGACAAGCGAATTAATAAAAGTTGCTTTAAAAGAGATTGAAAATCCAAAAAGAGCCCCTTTAGTAAAACAGATAGATGAAAACCTAATAAAGTATAAAGAGGAT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTATATCAAATGGGGATTTGAGAGTAGATTAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.22%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-2.20,-3.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [90.0-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.37 Confidence: LOW] # Array family : NA //