Array 1 6327-6523 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_QBBO01000010.1 Helicobacter pylori strain CHL49 CHL49_Contig_10, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence            	Spacer_Sequence                  	Insertion/Deletion
==========	======	======	======	===========================	=================================	==================
      6327	    27	  81.5	    27	.....C......CA.....G.....G.	TGTCGTTATTGAAGCTGGCGTTGTCAG      	
      6381	    27	  96.3	    30	....A......................	TGCTGTTTTCAAAAACAGATTGAGCGCTAC   	
      6438	    27	 100.0	    33	...........................	CGCTGTTATTGAAGTTTAAGTTAGCGCTGTTAG	
      6498	    26	  88.9	     0	.G..T..................-...	|                                	
==========	======	======	======	===========================	=================================	==================
         4	    27	  91.7	    30	TAAAGTTATAAGTCCCTTGATTGAAAG	                                 	       

# Left flank :   TAAACTTTGAGCGTCTTTAGCGATAGTGGTGTTTTGATTGTTGGTGTAGTCTGTATCACTGCCTGCGATCTTATTATCACTAGTAGCGTTATTTAAAGCGGTTTGGGAATTACTCAAGTCTTGTTGGTAGGTTGCTTGGGCTTTGGCTTGTAAATCGTCCCCTAAAAATTGGGTGGTAATGGCTTGTTTGTTAAAGGTTTCTTGTAAGGTTTCATCTTGCCCGTTAATGTCAAAGGTTACATCATAAGTGTTACTACCCACTTCAACATGGCTTATGGCTTTATCGCCCTTATAGTTGATCAAATCCCATAAATAGCTTTGATAAACCCCATATTGGATGGTTTTGTTTGTGGTGAGAATGTCATAGGTTTGATTGCTATTAAGGGTTTGATTGAGGTTAAAAATCGCATCAGAACCAAAAGACACACTGCCTTTAAGGCTAGCAAAAGGCGAACTTGAATTTAAAGTGTTAGTGCCTGAAAAACTCACCTTGCTTGCAT
# Right flank :  GTTCGTTTTATTAAAAGAGAGATTGCTGTCAGTCCCATTCCCGCTGAAACTAAAGCCCCCATTGGTGTCGTCTGTAAAGCTAGAAGCGCTCACATTGATGTTAGAACCGCTGAAATTCATGTAAGAGTGCTGTGTTCCTGCATCGCTATTATCAAAGCTGGCTTGATTGATAGTGATACGGTTAGCCGCATTAAAATTGAGAGTGGCCCCACCGCCAGTAGAAAATGAGTTGCCGGTTGTGATACGGCTAGAATTAAAATTAATCGTTTGAGCGTCATAAGTGCCTGTGATATACCCTACATCACCTCCATTGACACCCATGCCTCCAAAGCGGATATTCCCTCCCACATTAAGCGTGCCATTATTGAATTTTTGCGTGAAACTAGCCCCACCAGCACTATAAGTGGTAAGGGTGTTCAAATAATAAGTCCCAGAGCCTTGAGCGCTATTAAAAAGACAATAAGAGTTGTGCGTAGGGGAATTAGAACCGCTTTCAATAT

# Questionable array : NO	 Score: 3.59
# 	Score Detail : 1:0, 2:0, 3:3, 4:0.59, 5:-1.5, 6:0.25, 7:-0.04, 8:0.6, 9:0.69,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     TAAAGTTATAAGTCCCTTGATTGAAAG
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         F Score: 4.5/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:70.37%AT]
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  NA [0.00,0.00] Score: 0/0.37
# 	Array degeneracy analysis prediction:      R [6-3] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [61.7-56.7]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [4.5,0.41   Confidence: HIGH] 

# Array family : NA
//