Array 1 7511-9327 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABBHF010000003.1 Flavivirga sp. Y03 scaffold_3, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 7511 36 80.6 30 AAGT.CT.....A....................... TTGGGAAGTATTTATGCAGTATCCAGCCGC C [7516] 7578 36 100.0 30 .................................... GATGTGAACAACGATCTGCAAATAGATATG 7644 36 100.0 29 .................................... TACAATTTAAAAGCTTGAAACTTGTCCTT 7709 36 100.0 30 .................................... TCTTATAAATTCATTTGATATTGTTCTACC 7775 36 100.0 30 .................................... GGATTTATGTTTTACAGATAACAAAGACCT 7841 36 100.0 30 .................................... AAAGGCAGCCTAGCGCTGCCGTCACGTCGT 7907 36 100.0 30 .................................... AACGCCTCAGATGGTAAATTTCCATCTTTC 7973 36 100.0 30 .................................... AAGCTCTTCCTTAGCGGATTGAGCCCTATA 8039 36 100.0 30 .................................... TAAAAGCCTGCAAGGGAGCAGTATTGGCGG 8105 36 100.0 30 .................................... ATTTACGCCCTCTTTTCCTAAAGCTCTACC 8171 36 100.0 30 .................................... AATCTATATCTTTGGGTCTAGTTCCTAGCG 8237 36 100.0 30 .................................... ATAGGATTTTTCATTTAAAAAGCTAGGGAG 8303 36 100.0 30 .................................... CATACACCTGTGTATAAATCATATTGCACT 8369 36 100.0 30 .................................... TTTTTAGCGGGATGGTCTTTTAGATCTGCT 8435 36 100.0 30 .................................... TTTGTTAAAGTTGCTATTAAAAAAGAACAG 8501 36 100.0 30 .................................... AGTAAAATCAAGAACGCTTTCATTTAGCTG 8567 36 100.0 30 .................................... GCGAGGAAAGAAAACCCGAAAAACCGCCTC 8633 36 100.0 29 .................................... AATTAATAAGCCTAAGTAAATTTAAAAGA 8698 36 100.0 30 .................................... GCGGTTGCTTTTGACTCTATAGTTAAGCCT 8764 36 100.0 30 .................................... TCTGGGTCTGAAGGGTTGTTGGTCTTATCT 8830 36 100.0 30 .................................... GATTCTCCTGAGCAAAAAGTAACCGTTGTT 8896 36 100.0 30 .................................... AGCAGCTACGCCGCATGTTGTTTTTGATGG 8962 36 100.0 30 .................................... GGAAGACAAACCCACCCATCACTTAAACAT 9028 36 100.0 30 .................................... TTTATCCCAGACCCGATAAAAGAGCGAACG 9094 36 100.0 30 .................................... AAGAACTCCTGCAGGCAACAATCTCTCACG 9160 36 100.0 30 .................................... GGTCGGCTCGGCAGACGTGGCAGAAGTCTG 9226 36 100.0 30 .................................... CATGAGACAATACTATTTGAAACATAAAAT 9292 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 28 36 99.3 30 GTTGTAGTTTGATTAAAGATTAGGAAACACGATATT # Left flank : GGAAAACTTTAGCGGGGCAGAACAACTAAAAAACCATGTAAACAAATGGGTAAACCCCAGAAATAACCACCATGTCTTAATTTATAAAGACGAAGATGGCAACCTTAAAGAAGATGTGGTTACTTTTTGGACAGTTGTTGAAAGAAAAAAACAAGGGGCTTCAATTTATCAATTGCCCTTTGGAGGTAAAGAGATAGTAACTACTTTACATATCAATGATATGTTTTTATTGGGGCTGGACGAAGATGAAATTGATTGGGATAATCCAAACCATAAGGTTTTAAGAGAGCATTTGTACAGGGTACAGAAACTATCGTCAAAATTTTATGAATTCAGATTAAATAGCGAAGCGACAATACAAGAAAATTACTCTCCGTATTACATTAGAATACAAAGCCATGGAGAAGGGAAAACGGGTTGGTTGACGTTTAACCCTATAAAAGTTAAAGTTTTAGTTTCTGGAAAAATAAGGAAAATTTAAATTAATATTTAGTAATATT # Right flank : TAGTTGGCTTGTTGCCTTCTGGTAATCATGTTGTTAAACAAAAATATCGTTTTAAAAAATGCTTCTTTTTTGTAGTAATAAGGCAAGATTGAGGCATTTTTTTTATTTTAAAAAAGTTCCAGTTGGGTTGGTGGCGGTTCTTTGGGGACTTCTATTTTGCCCCAAAAATTCATGATATTGCCAAATTGTTTATCGGTTATTCTAAGTACACTTACTTTACCTAAGGGAGGGAGCAGCCTTTTAATGCGTTTTTCGTGTACATCGGCACTTTCGCTACTGGCACAATGCCTTATGTATACAGAGTACTGCATCATGGTAAAACCGTCTTTAAGGATGTTTTTTCTAAAACCGGCAGCATTTTTTCTGTCTTTGGCAGTTTCTGTTGGTAAATCGAAAAATACAAATAACCACATAATCCTATAGCCATTTAGTTCCATAGTTTGGGATACTTGATCTTTTTTCTTTTTCCACAATAGCATTGTTGTAACGAGCTGGCCGTT # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTAGTTTGATTAAAGATTAGGAAACACGATATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.22%AT] # Reference repeat match prediction: F [matched GTTGTGGTTTGATTAAAGATTAGAAAACACGATATT with 95% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.30,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [85.0-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.77,0.41 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //