Array 1 182901-180127 **** Predicted by CRISPRDetect 2.4 *** >NZ_JUBL01000002.1 Klebsiella pneumoniae strain KP-11U 126311U-contig_2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 182900 29 100.0 32 ............................. ACGGCAAAATTTCCACCGGCGCCGCCGGAGCA 182839 29 100.0 33 ............................. TCTCCAGCGACTTTAAACCGAATTTCTAAGGAG 182777 29 100.0 32 ............................. TTCAACTTTTGAAATCAGTCCAGCGGGAAGAA 182716 29 100.0 32 ............................. TTCAACTTTTGAAATCAGTCCAGCGGGAAGAA 182655 29 100.0 32 ............................. TCAGTATGGTCTTCTCTCAGATCATAAACGCC 182594 29 100.0 32 ............................. GTGCGCCGACCATCCGTAAGCGGTTCTTCATG 182533 29 100.0 32 ............................. ATCGCCAGCATCGTGGCCCATGCCAGATCGCC 182472 29 100.0 33 ............................. CATTGTTTAGGTTGAATTTCTTGCTGTTCGTTA 182410 29 100.0 32 ............................. CCAACGGTCATGACGCCGGCGCTGCATTTGTA 182349 29 100.0 32 ............................. AGGACTACGTAGAAAAGCGGCAGTTTGAGGCG 182288 29 100.0 32 ............................. GCGTTACATTCCGCGGGAACTGGCCAACGGCC 182227 29 100.0 32 ............................. AGTCTCTGATTACGACCGCTATCGACGATCTC 182166 29 100.0 32 ............................. AGAGTGACGACGAGCTGCGGCAGCGGATCCTG 182105 29 100.0 32 ............................. GTGCTGGGCAAATTAATCCGCCTGTGGATATG 182044 29 100.0 32 ............................. GCAACCGACGGCCCAATTCTAATTCAAATGAA 181983 29 100.0 32 ............................. AGTTACAGAGGCTGCCTGGCGCGCCGCTGCAG 181922 29 100.0 32 ............................. CGTGTCGGTCAGAAAGAGAATTTGGCTATTGG 181861 29 100.0 32 ............................. TTGAATATGACCCAGTTTCCATGCGCATGTCT 181800 29 100.0 32 ............................. CGGTTATTCAGCATCATCAGGTTTACGGACTG 181739 29 100.0 32 ............................. TCGGCAGGATTTGCTGGATCACCGACCCGGCG 181678 29 100.0 32 ............................. GCAGATACGAAAAGAGGTGTGCAATGATTTAC 181617 29 100.0 32 ............................. GACTAACGGATCACAGGTCCCGGTGATCATAT 181556 29 100.0 32 ............................. GATGCTGTAGCCCAGGCCATTGAGGCCAATAA 181495 29 100.0 32 ............................. CTCAGGAAAAGGGATTCGAAGCGCTGTCGTTC 181434 29 100.0 32 ............................. CGGGCAATCGTGTCTTCCGGATACACGACGTT 181373 29 100.0 32 ............................. TCGGCGCCATATTCCAGCAGCAGGGACTTGAT 181312 29 100.0 32 ............................. GTCAGTATAGCTTGCCCCAGCTTGTGGCGTGG 181251 29 100.0 32 ............................. GATGACCGCGAGGGAGAAGTGTCGCGACTCAC 181190 29 100.0 32 ............................. TGCCTGAAGAGTCTGACCCGGTCTGCGGGCTA 181129 29 100.0 32 ............................. ACGCCAATTCACTGATGGACGAAATGATGAGC 181068 29 100.0 32 ............................. CGCCGAACGACCTTTCATATACTCCGCAACTG 181007 29 100.0 32 ............................. CAACACTGAAAGGCGTTCTGCCCAGTTTCTCG 180946 29 100.0 32 ............................. GCCGGCGCACATTTTTCACATCGTCCATTATT 180885 29 100.0 32 ............................. GAAAACCCGCGCAAGTCGAAGTCTAAGACGGC 180824 29 100.0 32 ............................. GCTCGGCCAGCGTATCAAGGGGGCGCTCTGTG 180763 29 100.0 32 ............................. TACGCAGCCGGATCCAGGAGCGCATGGACGCT 180702 29 100.0 32 ............................. GCACGATATTCAGCATCATCAGGACGGTTCAT 180641 29 100.0 32 ............................. CCTCCGCGATAGTGTTACGTCTGATCATATTC 180580 29 100.0 32 ............................. ACCTACCAGATCCACACCGGGCGCTGCGAAGA 180519 29 100.0 32 ............................. AGGTGCGCCTCCACGATATTCAGTTACCTGCC 180458 29 100.0 32 ............................. TCACGCCCAGGGCTTCCTTTGCGTTCCGAAAA 180397 29 96.6 33 ........T.................... CCCACAAAGAGATTTTGGAGCAACGTGGTCAGC 180335 29 100.0 32 ............................. TAGAGGTTTCCATCTACCCCCATTCCCGCCAG 180274 29 100.0 32 ............................. TGCGTCACGACGCCGGCGACAGTGACATCGTC 180213 29 100.0 29 ............................. GGGTTCACTTGGGTGAAACTGAACTAACT 180155 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================= ================== 46 29 99.4 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGGTGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTATGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT # Right flank : GTCCACTAACGTTATCGATCCTGAGGGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGACCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACTGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTGGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATATAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATTC # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [50.0-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //