Array 1 171231-172842 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_CAJSZU010000004.1 Klebsiella pneumoniae isolate A5_5.KP.CDM, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence              	Spacer_Sequence                 	Insertion/Deletion
==========	======	======	======	=============================	================================	==================
    171231	    29	 100.0	    32	.............................	TTTTTTTGACGAAGACGGCAACGAGTTAGAAG	
    171292	    29	 100.0	    32	.............................	GTCTCTGCCAGTTTTACCTGCTCAGCGGATAA	
    171353	    29	 100.0	    32	.............................	CTGACAGCTGGCGCTAACCCGTCGTTTATCGC	
    171414	    29	 100.0	    32	.............................	CGTGAGCATCTGGGCATCTTCAGTGATAGCGT	
    171475	    29	 100.0	    32	.............................	TATTTTTGAGATGATGGATTGTTGCACACCAG	
    171536	    29	 100.0	    32	.............................	CACAGATGTATAGCCAAGCGTTTTGCGCCAAA	
    171597	    29	 100.0	    32	.............................	CGCTTCTCGGCTTCTCTGAATTTATCCGCCCA	
    171658	    29	 100.0	    32	.............................	ATCCCGACCCGCTCCTCCAGAGCGAATACGAT	
    171719	    29	 100.0	    32	.............................	TGCTTTATGGCAAATAAGAGAGGATATAACCA	
    171780	    29	 100.0	    32	.............................	GCGTCCGCCTCCCAAATAGCCAGGCTGTTATT	
    171841	    29	 100.0	    32	.............................	CTTCCCGCGCATATTCATTGCCGTCAGCCAGC	
    171902	    29	 100.0	    32	.............................	CCTGAATTGGGTGGACACCACAGCAGTTGGGA	
    171963	    29	 100.0	    32	.............................	TAAATCCCAGCTGGTTTGACGTAGTGGCACTG	
    172024	    29	 100.0	    32	.............................	CAATGAAGGCTTATAAGGGTGAAGAGAGCAGG	
    172085	    29	 100.0	    32	.............................	CAGTCGGTAACGGCTGGGCGTGACCTCAAAGC	
    172146	    29	 100.0	    32	.............................	GTGCCATTTTTATTTTGCTTAAAATAAATATC	
    172207	    29	 100.0	    32	.............................	CCTATTGTGTTCAGTCGTAACAGCTGAATCAG	
    172268	    29	 100.0	    32	.............................	GGCGCGGCGGAATAACCACTTTATGAGCAGGT	
    172329	    29	 100.0	    32	.............................	GCGACCATGCCGTAGTCTTCAATGACGTAATC	
    172390	    29	 100.0	    32	.............................	AGGGCTGGTCCGACTCCCAACTGGCGAGAATG	
    172451	    29	 100.0	    32	.............................	GTGCTGGCCTTGAGCTTTTCAGCAATACGTCC	
    172512	    29	 100.0	    32	.............................	GTGCTGGCCTTGAGCTTTTCAGCAATACGTCC	
    172573	    29	 100.0	    32	.............................	CCCCGTCGTCATTCGCGCATTCTGCGCACAGA	
    172634	    29	  96.6	    32	.....A.......................	TAACAGGGCCATTTTCCCGGGTTGCCAGACGA	
    172695	    29	 100.0	    32	.............................	TCACCCTCGTAGCCGATACCACTTTCGCGCAG	
    172756	    29	 100.0	    29	.............................	GGGTTCACTTGGGTGAAACTGAACTAACT   	
    172814	    29	  75.9	     0	...........ATTC...A......G..C	|                               	
==========	======	======	======	=============================	================================	==================
        27	    29	  99.0	    32	GTGTTCCCCGCGCCAGCGGGGATAAACCG	                                	       

# Left flank :   GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT
# Right flank :  CGTCCACTAACGTTATCGATCCTGAGGGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTTAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTGGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGTACCATCTCATAGCCTGTCAATT

# Questionable array : NO	 Score: 6.21
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTGTTCCCCGCGCCAGCGGGGATAAACCG
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     F [5,4] Score: 0.37/0.37
# 	Reference repeat match prediction:         F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-13.50,-12.00] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-8] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: F [76.7-50.0]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [5.92,0   Confidence: HIGH] 

# Array family : I-E [Matched known repeat from this family],   
//