Array 1 171231-172842 **** Predicted by CRISPRDetect 2.4 *** >NZ_CAJSZU010000004.1 Klebsiella pneumoniae isolate A5_5.KP.CDM, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 171231 29 100.0 32 ............................. TTTTTTTGACGAAGACGGCAACGAGTTAGAAG 171292 29 100.0 32 ............................. GTCTCTGCCAGTTTTACCTGCTCAGCGGATAA 171353 29 100.0 32 ............................. CTGACAGCTGGCGCTAACCCGTCGTTTATCGC 171414 29 100.0 32 ............................. CGTGAGCATCTGGGCATCTTCAGTGATAGCGT 171475 29 100.0 32 ............................. TATTTTTGAGATGATGGATTGTTGCACACCAG 171536 29 100.0 32 ............................. CACAGATGTATAGCCAAGCGTTTTGCGCCAAA 171597 29 100.0 32 ............................. CGCTTCTCGGCTTCTCTGAATTTATCCGCCCA 171658 29 100.0 32 ............................. ATCCCGACCCGCTCCTCCAGAGCGAATACGAT 171719 29 100.0 32 ............................. TGCTTTATGGCAAATAAGAGAGGATATAACCA 171780 29 100.0 32 ............................. GCGTCCGCCTCCCAAATAGCCAGGCTGTTATT 171841 29 100.0 32 ............................. CTTCCCGCGCATATTCATTGCCGTCAGCCAGC 171902 29 100.0 32 ............................. CCTGAATTGGGTGGACACCACAGCAGTTGGGA 171963 29 100.0 32 ............................. TAAATCCCAGCTGGTTTGACGTAGTGGCACTG 172024 29 100.0 32 ............................. CAATGAAGGCTTATAAGGGTGAAGAGAGCAGG 172085 29 100.0 32 ............................. CAGTCGGTAACGGCTGGGCGTGACCTCAAAGC 172146 29 100.0 32 ............................. GTGCCATTTTTATTTTGCTTAAAATAAATATC 172207 29 100.0 32 ............................. CCTATTGTGTTCAGTCGTAACAGCTGAATCAG 172268 29 100.0 32 ............................. GGCGCGGCGGAATAACCACTTTATGAGCAGGT 172329 29 100.0 32 ............................. GCGACCATGCCGTAGTCTTCAATGACGTAATC 172390 29 100.0 32 ............................. AGGGCTGGTCCGACTCCCAACTGGCGAGAATG 172451 29 100.0 32 ............................. GTGCTGGCCTTGAGCTTTTCAGCAATACGTCC 172512 29 100.0 32 ............................. GTGCTGGCCTTGAGCTTTTCAGCAATACGTCC 172573 29 100.0 32 ............................. CCCCGTCGTCATTCGCGCATTCTGCGCACAGA 172634 29 96.6 32 .....A....................... TAACAGGGCCATTTTCCCGGGTTGCCAGACGA 172695 29 100.0 32 ............................. TCACCCTCGTAGCCGATACCACTTTCGCGCAG 172756 29 100.0 29 ............................. GGGTTCACTTGGGTGAAACTGAACTAACT 172814 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================ ================== 27 29 99.0 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT # Right flank : CGTCCACTAACGTTATCGATCCTGAGGGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTTAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTGGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGTACCATCTCATAGCCTGTCAATT # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //