Array 1 6280-4202 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADRGP010000073.1 Fusobacterium sp. DD25 JD38_72, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 6279 36 100.0 30 .................................... AATTTCAGCAATCGTAAACAGGAGAATATG 6213 36 100.0 30 .................................... GTGCAGCTGATATTCTTGCAGCACTATCCA 6147 36 100.0 30 .................................... TCTTCCCATGCCTAGGTGGCATATTTATAA 6081 36 100.0 29 .................................... ATTTTTAAATATTGTATTGTCTTTTATAA 6016 36 100.0 30 .................................... ATGGGACTAGAAGGGCTATTTGATAAGGTT 5950 36 100.0 30 .................................... CTTAGGAATAGCGGAGACAGAAGAAGAGAT 5884 36 100.0 30 .................................... TTACAAGAAAAGAAATTGATAGTTAAGGTT 5818 36 100.0 30 .................................... TGCAAGAGATAAGACCTAATCATTATAAGT 5752 36 100.0 30 .................................... TGGTATCAAAGGGTTGTTGTAAACGGAGAG 5686 36 100.0 30 .................................... GATGTTACAACTAGAAACCCTATGAAAGGC 5620 36 100.0 29 .................................... TATAGATGATATTCCAAAAGTAAATAAAG 5555 36 100.0 29 .................................... TAAAAAAAGAAAGTCTTTCGTCTGCCGTT 5490 36 100.0 30 .................................... ATTTGCATCCAAATATGAAAAGAGTTCGTT 5424 36 100.0 30 .................................... TGGTAAATATAAAGGAAGAAAACCTATTAC 5358 36 100.0 30 .................................... ATTGAACAATATTTTGAGATTAAATTCAAT 5292 36 100.0 30 .................................... TGACACTGGGATAGAATTCCCACAGATGTA 5226 36 100.0 30 .................................... TTTTGCCCAAATAAACTACTATTATCACCA 5160 36 100.0 30 .................................... AAGAAGCTCTCTAAAAACCACATATCAAAT 5094 36 100.0 30 .................................... GCAAAAGTTGTTTTTCCTGTCGAAGTACCT 5028 36 100.0 30 .................................... AAAGGTGATAAAGTTTCCATAGCTTCAGCA 4962 36 100.0 29 .................................... TAAATTAACTTCTTTAAACTGTTCTTCCC 4897 36 100.0 30 .................................... AAACTAGTTAGATTATCAATAGAAAGTTAT 4831 36 100.0 30 .................................... AACATTCCTTGGCTCTAAGTTTGTTGGTAG 4765 36 100.0 30 .................................... GGCTTCTTGAATTATGGCAACAATCAGCTA 4699 36 100.0 30 .................................... GTTGTAATCTTAATTGACTTATTACCAACT 4633 36 100.0 30 .................................... CGTTCCTAGGTATTATGGAATATGAGAGAA 4567 36 100.0 30 .................................... AACTCAACTGATATTCATCCACATGTTTAT 4501 36 100.0 30 .................................... GTAATGCATCTGGATTACGAGGGCTAATAG 4435 36 100.0 30 .................................... TTGCTTCAGGGCTCACTATTACATCCTCTA 4369 36 100.0 30 .................................... GAAGATGGAACAAATGAACTTGTCGGAGTT 4303 36 100.0 30 .................................... TAATAATTTTATGCAACTATATAACCACCT 4237 36 94.4 0 ...............G..................C. | ========== ====== ====== ====== ==================================== ============================== ================== 32 36 99.8 30 GTTTTAGTACCTTGTAATATTTGAGTATGGTAAAAC # Left flank : TTGTATTTCCAGAAAATAAAATTGCTTTAAAGGATATGCCAAAATTGCGAAATTTTTTGTTTGAATTGTCTAAAGAGAATAAAGTAATAGTGGCAACTTTTTCTAAATATCTTTTTGATTTTTCAACTTTGGATAATATTAATATTTATATTAATTCAAAATTAGCAAATTCTTTTACAGAAGATGAGATAATAAACGAAATTTATGAAAATTATCCGGTATTGAAGTCAAAAAATGAAATAAATGCTCTTCTATCTTTTGTATTAAAAAATTATTTATCTGATGTTTTACTTGGAAACATAATTACTAATAAATTTTTCTGTGAATTAGATAATGTTTTTATTGAAAATTATGAATTTATCTTCTTGCTCCTTTATTATTTAAAAAAGATAAGATTGAGTTATAAACTTAACTTGAACTATGATCCGACCTCTCCATTTTCGAACTATATAGAAGAAAAACTTTTAACATAATGTGATATATGTTAGAATAGATTTGAG # Right flank : CAAGGAAAAAAGGTTCAGAACTAAGCGTCTGAACCTTTTGTTATTTTTCAACTATTAAAGAATAATCTTCTGGAGTATCTATATCTAAGAACTCCTGAGAATATGGAAAATCAACAAGAGAAACAAGTGGAGTATTTCTAATTATATTTTTTCCACCATGGTCACCTTGAAGAGCAAGAAGCTCTTCTTTTTTACTATATGGAAAGAATACAGGTGAATATCTATCTCCATTACTTGTTGGAACAGTTATATATCCATATTTTTCAAAGTTATAATAGAGTTTTGAAATAGTATCTGGTGTCAAAAAGACCTGGTCACCAGTAAAAAATACAAAACCTTTTCCTGAAGAGTTTTGAACTCCTAATTTAATACTTTCACTCTGTCCTAAATTTGCTTTGGTGTTGTGAAGATACTTACAATTATATTTTTTACAAATATTTTCAGTCCAGCTGTCCCTTCCACATACCAGTATTTCAAAAAAGTTGGCGAAATTAAGTTTA # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGTACCTTGTAATATTTGAGTATGGTAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.22%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.20,-0.50] Score: 0/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-76.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA // Array 1 20783-22516 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADRGP010000014.1 Fusobacterium sp. DD25 JD38_13, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 20783 30 100.0 36 .............................. ACTGGTTCTCCATTTACAAAAGCAGGACCTTTAAAC 20849 30 100.0 35 .............................. TCACAAGGAACTTTACACCAAAATTCAAGGTTTTT 20914 30 100.0 35 .............................. TATGAACTTGAATTAGTTAAAAATGTTTCAGCTGG 20979 30 100.0 36 .............................. TGCCAGAATTTAGGCTTATTGAGCACGAAAAAACGG 21045 30 100.0 36 .............................. TCTTTTCCAAACTTTTCTTCTGTTATTTTTTCAAGC 21111 30 100.0 35 .............................. TGGCAGTTAATATCTTTTAAATCCTTATTATAAAA 21176 30 100.0 36 .............................. TCACTTCCAAGCCAAACTGCACCAAATGAACCTCTT 21242 30 100.0 37 .............................. AAGGATTGATTATGACTTAGATGATGATTTGCTTGAG 21309 30 100.0 36 .............................. TCATCCGAATTAGTCATCTCATCTGTCCACCCCATC 21375 30 100.0 35 .............................. CAAAAATACAGAAGTCTTTACAATACTGATGGAAT 21440 30 100.0 35 .............................. GGGCCGTTGTTTATTATTTTATCCCCATCAATCCA 21505 30 100.0 36 .............................. TCACTTCCAAGCCAAACTGCACCAAATGAACCTCTT 21571 30 100.0 36 .............................. TTTTTTAATTCATCCTTTTTATAATTTTGGAATTTT 21637 30 100.0 36 .............................. AATCTACAAAACATATAGATTTATTGAAAGTTATTG 21703 30 100.0 36 .............................. AATTAAAGTTTATAAATAATTTCAAAACTAAACAGA 21769 30 100.0 37 .............................. AGTTATACTTCCAACGTGTTGAAGAGAGCAAAAAAAA 21836 30 100.0 36 .............................. TATTCTATTGATTTAGGGGAAAGAAAAAACCCCTCT 21902 30 100.0 35 .............................. GTGAAACGGATCACTCCTGGGGGTATTCAAAAAAA 21967 30 96.7 34 .A............................ TAAGTGAAAACGCCCCCCTTTACAAAGTGTTTAC 22031 30 100.0 35 .............................. AACTCCATAGGTATTATAACATACCTCAAAAACCT 22096 30 100.0 37 .............................. GCTATTACTCCTCTTTCTCTAATATTCCCTATATCAA 22163 30 100.0 35 .............................. TATTGTTATAATAGCTTTTGTAAGTTGTGTTTAAA 22228 30 100.0 35 .............................. CTTAAAGCAGATTTTAAACCAACAGAAAAAGAAGT 22293 30 100.0 34 .............................. TAAACATACTTGATACAACTGCATTCATTAGTTC 22357 30 100.0 35 .............................. TTTAGAGTTTTCAGAGTCTCCAATGTTTCACTTCT 22422 30 100.0 35 .............................. GTAGTAACACGAGGGCTCTTTAGTTTATCAACAAA 22487 30 93.3 0 ..............CA.............. | ========== ====== ====== ====== ============================== ===================================== ================== 27 30 99.6 36 ATTGAATAATTACATTGGTAGTATTTAAAT # Left flank : AGAATTCTATCCTTTTAACATCAAGGAGAAGATTTAATGAGTAGGAATAGATATAATTTTAACTATATTTTTCTTTTTTATGATGTAAATGAAAAAAGAGTAAATAAGATTTTTAAAGTATGTAAAAAATATTTAACACATTATCAGAGATCTGTTTTTAGAGGAGAAATAACACCAGGTAATCTTCTAAAATTAAAAAATGAGGTAAGGAAAGTTATTAATGAAAAAGAGGACTCTGTATGTATAGTCAAATTTATAAATGATAGGTATTTTGCAGAAGATACACTAGGAGTGCTATGGAAAGAAGATGAAGATTGTTTTATATGAGTTTTCCAAGTGGAAAAATAAAAAAAACTTTGAAATCCTCATAAAATAATTGTTTGCAACGAAAAATATAGAATGTTGAAAATTTGATGTGAGGTTGGAAAAAAATTGAGGCATTCCTTAAAATATGGTATATTGAAAGAAAGTTGTGATTTCAGAGTAAGCTGATTATGACC # Right flank : TATACTTCACCTAAAAACTTACACAACTAAGAAGGACGGTGGAGTTTTTTAGTTTTAAGAACAGAGATTATTTTTATTCTAAAAGAGGCCTATATGTGGTATAATTAAAACATTGAAATAGAAGTAGGAAGTGAAATGATGGGAAAAATTATTTATTTTATAGGTGGAGCTAGAAGTGGAAAAAGCTCTAAAGCTGAAGGGTATATTTTTGCAAGAAATTATACTAAAAAAATATATGTTGCAACAGGTATAGCTTTTGATGAAGAGATGAAAGCTAGAGTAAAAAAACACCAAGAACAACGAGGCAATAACTGGTTGACAATTGAAGGATATAAAGACCTTGTAGAAAAAATAAAACCTCATGTTGAAGCAGGTGGGGTAATTCTTTTAGATTGTTTAACAAATATGGTAACAAATTTGATGATAATGGATAAAGAGTATGACTGGGATAAAATTTCAGTTGAAGAGGTTGAACAGTTGGAAAAGGAAATTACTGATAC # Questionable array : NO Score: 3.24 # Score Detail : 1:0, 2:0, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGAATAATTACATTGGTAGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:83.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.80,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 1 9718-9425 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADRGP010000019.1 Fusobacterium sp. DD25 JD38_18, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ====================================== ================== 9717 29 100.0 38 ............................. TTACTGAAGAAGTTACTGAAGAGACAGAAGCTCAGGCA 9650 29 96.6 37 .............C............... TCTTGTTAACAAGTAAAGATTACAAGTTGCCATATTA 9584 29 96.6 37 ........T.................... CTACAAAATGGTACTGATAGAGCTTTTGGATGCGTTG 9518 29 100.0 37 ............................. GAAAATGACATTCAAGAAAAAAGTGTTCATGAAAGCG 9452 28 93.1 0 .............C..........-.... | ========== ====== ====== ====== ============================= ====================================== ================== 5 29 97.3 38 TCTTAAAACATCCAATGTTACTATTCAAT # Left flank : TTTATATTCAGAATGCTCTTGTAGAAATATACCTTTAACTAAACTATAAAACAATTTATCATATGTTTTAAACTCTATACTTTCTGAGAATTTTTTATCACAGTACTCTCTATTTTTATCTTTTAGTTCATTTATAATGGAGTTATTATAGCTTAAAAAAAGCACCTTCTTATGTTTATTAAAAAGAGAGCCTGCTTGATCCTCTAAAATCATTTCAGCTCTGGCAAGTCCAACTAGTGTTTTCCCACTTCCTGCTGTCCCTTTTACTATTAAAATCCTTTCACTAGAGCCCACTATTGCAGCCTGTTCTTTTGATAGCTGTATCTTCATTTGACACCTCTTTATAAATGTGACCTGTTTTTCAATTTTATTATCCTCTATCAAGACCATATAATCAATACTTTTTTACTAAAAATTAAGTATTTAATTTTTAATTTCTCATTTTTAGCCATCTAGATATTTAAAATTTTTTCAAAAAATAAAAAAGACCCCTGAAAAGG # Right flank : GGTCAAATAACGACTTGTTATTATTTTATTTTACGTAACTCCCTTTACATCTAAAGTATAACATATTTTTTCCAAGCAATAACAGATTTTGCCTTTATTTCCATAAGTATCAATTTTAGATTAATTCACAAATTATCTATCAGTTCACTTGGAAAATTTACTAATTAAATGTACTACACCCTCCATCTTACTTATCCAAGACTTTAGGTGCAGTACACAAAATTATTTTAATTTACTATTCTTCTACTGGCTCTTTACACTCCTTAAATTTATCTATCACAAAGATATCCATACCATTAGAAACCTGATACTTTCCTTCCAGTTCATATCTTCCACTCTTAATAAGTCTTTTGCAGGCTCCAAAATCTTCATTATCAAGAAGATAAAGATATAAATCTTTTCCACGTACCTTTGCCTGGCAGCCTTTAGTGACAACATAAGCCACTCTGGTAATAACTCCATTATTCTCTTCTCTCTCTTTAACTTTTAGCATCTTATCA # Questionable array : NO Score: 2.84 # Score Detail : 1:0, 2:0, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:0.92, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TCTTAAAACATCCAATGTTACTATTCAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.40,-0.90] Score: 0/0.37 # Array degeneracy analysis prediction: R [2-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-76.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA //