Array 1 1669024-1667470 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP085953.1 Granulicatella elegans strain FDAARGOS_1559 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 1669023 36 100.0 30 .................................... CTGGTGGCGGTGGTACTGGTAAGTCTTTAT 1668957 36 100.0 30 .................................... AAGAGATTGAAAAGAAAGTTGCTAATCTAT 1668891 36 100.0 30 .................................... TTGAAATAGTTTTATATTCCTGTATACTAC 1668825 36 100.0 30 .................................... TAACAGATAACACATCAAAATACGAACTTT 1668759 36 100.0 30 .................................... TGACAATATGATTATATCACGATATAATAT 1668693 36 100.0 30 .................................... GCCCCCATATGAGAACAACTATAGCAGTTT 1668627 36 100.0 30 .................................... CAATTTAAAAGCGTACGCTTATAATAGTAC 1668561 36 100.0 30 .................................... TACTTATTTAAAAAACTTTTTTCAAATATA 1668495 36 100.0 30 .................................... ATTCTTCTAATTCTAGTTTTAACGACTCAT 1668429 36 100.0 30 .................................... CAAGATGTCAAAGGTGTATACTTATCACAT 1668363 36 100.0 30 .................................... CTGTTATTGACTATGTAGGCTTGATTAAAG 1668297 36 100.0 30 .................................... GTACTTCATTCAGATTCTCCAATTCGTCAA 1668231 36 100.0 30 .................................... AAGTTGTATTTGGGTCCCCAGATACTATGC 1668165 36 100.0 30 .................................... AGTATGAGTTAGCAGAGCTTATTTCATTAG 1668099 36 100.0 30 .................................... ACAAGATGAAATCGATAAGAACGCTCAGTT 1668033 36 100.0 30 .................................... TCAAGCTGTCGGCAGACCGCACACTTTACG 1667967 36 100.0 30 .................................... TTCTTTAGTTATATGACACCAACCTTCTAC 1667901 36 100.0 30 .................................... CTTGTAATTCTTCAATAATCATTTGAGCCA 1667835 36 100.0 30 .................................... TTTTAGAGAGAATGCAAGAGCGTTGCCCAT 1667769 36 100.0 30 .................................... ACAGGTCTATAAAGATTTAGGTTTTGATGC 1667703 36 100.0 30 .................................... AAACTGATTTAGGTTTATCTCCTTCATCGA 1667637 36 100.0 30 .................................... TTAATAAACTTAAAACTTACGAATATGATT 1667571 36 100.0 30 .................................... CCTCTAGTAAATCAATTTGAAATCCGCTAA 1667505 36 91.7 0 ................................TT.G | ========== ====== ====== ====== ==================================== ============================== ================== 24 36 99.7 30 GTTTTTGTACTCTCAAGATTTAAGTAACTATAAAAC # Left flank : ACGGAATTTAGGAAATTCTATTTCTAGAAAAGAATTGAAAATCATTAAGACAAGATTATTAAATTTAACAGACCATCATGACAATCTATCCGTCATTAATTTTATTGGATACCATGAACCAATCATTTTTGAAAGGGAAGTAGTGGAAGAGATAACAATTATAGGAGAGAGAATAGAATCTTTGCCAGAACTGGAATTTCTTTATCATCGATTTATACAATCTTATCCGTTAAATACTGTTCCAACTATGGAGGAATTTTGTTCTAGTTTAGAAAGAATTGTTTATTATTTGTTTGATAAGGAGTCGAGGGAGATAAGTTTATCGATTAAAGATCAAACGATATTAAAAGTACTCCATCAACTATATGATTATGATTTAAAAGAAGTTTCTTATATAAGAAATTCTGTTTTACAAATGTTTATTCATGAAGATGATTGACAATTGAGTTAGGAATTATATAATGAACATGAGAGATAAAAATCCGAATTTTTTATTTGAG # Right flank : ATGGACGTTGTGGTTTAGTAGATAAAAATTTGAGAAATGTAGTGATAGAGATTTTGGTTTGATAGTTTAAAAAAAGAAATGGACTATGATTACTGATTTGAATGATAGTGACTAATGAAAACATTCCCCCGCAAGAATTTCTTGTCGGGGGATATTTCCATTTATTGAAACTTTTTATACTGTTCCTTCAACGCTTCTTCGAATTTCGAAGTTGGGTCTGGGTGGAAGTATTGTGTATATTTGAGTGTGTCCGGTAAGTATTGTTGTTTTACCCAGTGGTTTGGATAGTTATGTGGGTATTGATAATTCATTCCTCGTCCTAATTTTTGGGCTCCTTGATAATGTGCATCTTGTAAGTGGGAAGGGATGTTTCCTGATTTTCCTTGTCTAACATCTGAGAGTGCTGCATCAATGGAGAGCATTGCTGTGTTTGATTTAGGGGAGAGGGCTAATTCAATCACTGCATTCGCAAGTGGGATTCTTGCTTCGGGTAAGCCGAG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTGTACTCTCAAGATTTAAGTAACTATAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.00%AT] # Reference repeat match prediction: R [matched GTTTTTGTACTCTCAAGATTTAAGTAACTGTAAAAC with 98% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-1.20,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-76.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.91 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //