Array 1 4099-3479 **** Predicted by CRISPRDetect 2.4 *** >NZ_MEIH01000310.1 Haladaptatus sp. W1 406, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ===================================== ================== 4098 37 100.0 36 ..................................... AAGCCATCGTAGGTCTCGTGGGTCAAATCGCCCGGC 4025 37 100.0 36 ..................................... TGGTAATAGCTCTTGATTTGATTCCCGTGATTCATC 3952 37 100.0 35 ..................................... ACCTGGACGCAGGCTTTCCGATTTACTGAAACATT 3880 37 100.0 35 ..................................... TGAGAGGCTACAAAATAGTCGGATGGTTTACGCCG 3808 37 100.0 35 ..................................... GGTTGTATTGTCCCGGTGCCGGGAAGCCAGACACG 3736 37 100.0 36 ..................................... CCGGGCAAAGATCGTGACCGGGCGCGGCGCGGAGGT 3663 37 100.0 37 ..................................... AACAGCACTGACACCGTAGTCGTTCCAGACGCCGTAC 3589 37 100.0 37 ..................................... CCGTTGTACACACAATCGTGGTTGCGGTCGGCGTTGT 3515 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ===================================== ================== 9 37 100.0 36 GTCGCGATGAGGTAGAAACCCACACCGGGATTGAAAC # Left flank : CCGCCGCCGACGGAGAGACGATTGCTAACTTCGGTGGCGGGCCGCGGGAAATTTTCCTTGCATTCACTATTGCCGCTCTCGTCGTGAATGATCAACTCGACACTGTGCTTCAGTTCACTGATATCGACGAAGAAGTCAAAGAGCTCGCACTCCCGGAACTGATGGAGCCTGTTTCAGCAAAAACACACCCGACGCTCCGGGCGGTCTCAGAAGCGGATGGAGAATCGACGTTGCCTGCGATCGCTAAGCAAACCGAACAGTCGCGGAGCACCGTTGGTCGACACCTCGACGACCTCGAAGCAGCCGATGCCGTTGAGACCGTGAAACAGGGAAAGACCCGGCACATCAAACTGACGCTCGGGGGTCGGCTGCGGCTACTCCGACTCGGGTAGTTCGTGGACCCACTTGAATGACGTGTACAGGGGTGGTCCACGAAGCAAGGAGCCACTCTCGTGAGTCTTGCGTAAACTATAGGGTCTCTCGGCGGATTATCACCCCCT # Right flank : CGTTGTTTGCGTGCTCGGCAAGTCGGTCTGCGAAGTCGAAGCACCGAAGAAACCCGCACGGGATAGTATATTATACTAATCAACCGACCCTACCAACCGGGCGACGACGTACAAGTCTACGTCTCAGAGACTGATCCCGATAGCGAACACCACGGGAAGAAGGCACTATCACGGACGTCTTGCAGGACACTCTCGGAGACGAGACTGGGCGCGAACTGGATTCCTACAGCTACCGCATCGGATACTCTAATCCACGCTACCGAATCATGCTAAATAGATAGGTTTGTTCTGTCGATCTGTAGTGCTTGCTTCGTTGGGAGCTCAACGAGTGCTAGATAGAGGAAAAGTGGTCACTCACTGCACTTGGATATGACTCCGCAATGCACTCGGAAATAAATCGATCCATTGGCAGGATAGCCGATCATCACTCCCTGACTGGCCACTGTGAGCTACTCGGTTCGCGTTGAGGTGAGTAGCAAGCAGTAGCCATATGCTGGCAT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGATGAGGTAGAAACCCACACCGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: R [5,12] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-6.70,-3.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [40.0-45.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.87 Confidence: HIGH] # Array family : NA // Array 2 13846-16068 **** Predicted by CRISPRDetect 2.4 *** >NZ_MEIH01000310.1 Haladaptatus sp. W1 406, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ========================================= ================== 13846 37 100.0 36 ..................................... TGTTTCGGAATCGCCATTTACTATTACCTCCACCGC 13919 37 100.0 41 ..................................... ACGACGTCGTTGGAAATCCTGAAGAAAATCCACTCGCCGGA 13997 37 100.0 37 ..................................... AGGACATCATACAACGAAAAGTCCGCGTCGTTGTACT 14071 37 100.0 37 ..................................... TTAGCGACACACCCAGCGACGACACCGACGCGACGAC 14145 37 100.0 33 ..................................... ACGACTAAAATGCCCACTTGTGACTATCCGGAG 14215 37 100.0 37 ..................................... CCAGTGGAAATGGTAGCATCGACGGCCGGAGTCACTG 14289 37 100.0 37 ..................................... AATCAGATTAGGCAGTCGTGACGTCCACGGTGATGTC 14363 37 100.0 34 ..................................... GTCTGGAACGATGATAGTTGCATTTTCGCCGTAC 14434 37 100.0 36 ..................................... GACTGTCCCGGCGTCTGGCCCTGTGCCTGTTGCCAC 14507 37 100.0 36 ..................................... ATGATGAGCGGGTAGGCACCGTCCCAGTTGGCGTGG 14580 37 100.0 36 ..................................... TTGCGGGCGGGCGTGGGATGCCCATCGGTCGTGTTG 14653 37 100.0 35 ..................................... CGCTCGGCTTCCGCCGCAACACGGTCGGCGAGTGC 14725 37 100.0 35 ..................................... TGGTATGGGTGGTGGGACTGCCCCACCGCCACAGA 14797 37 100.0 35 ..................................... AGCGCGTCGCCGGCTTCGGTGAGCGCCCACAGCAC 14869 37 100.0 36 ..................................... CGCCGGAGTCAAAGGCCGACGTCCAACTCGACCACG 14942 37 100.0 32 ..................................... TACTGTGGCTGTACTCTGATAGCCAAGGGACC 15011 37 100.0 35 ..................................... TTCTCAGATACTTCACGGCTTGTAACTGAGTCGGC 15083 37 100.0 37 ..................................... TACCTATCCCATTGGACAAACCGAAGTTTGCGAAGGT 15157 37 100.0 37 ..................................... TACCTATCCCATTGGACAAACCGAAGTTTGCGAAGGT 15231 37 100.0 36 ..................................... ACGCGGATATAGCGGTCGTCGCTAACCGATCGATAG 15304 37 100.0 36 ..................................... ACGCGGATATAGCGGTCGTCGCTAACCGATCGATAG 15377 37 100.0 36 ..................................... GTTATTTTTGGACAGCGACTTTCTCGCACGCGACAC 15450 37 100.0 36 ..................................... ATCCCATCGATGCCCGAACTCTAAGCCGGAGGACTC 15523 37 100.0 33 ..................................... AATACTATATCGGCGATGGAAGCCAGTGGCAAA 15593 37 100.0 37 ..................................... GGCATACAACGCAAGAGATACCATCAAGATCGGCCTT 15667 37 100.0 32 ..................................... AACACCGAATAGACGCCCATCGCCCACAGGAG 15736 37 100.0 37 ..................................... AATTTCCTGATATTTTCAGGTCCGCGGATTCCGAATT 15810 37 100.0 37 ..................................... GATTTCGTCGCGTTGTGGGGAGACGTGACGGAGATAG 15884 37 100.0 38 ..................................... TGGTCGCTGCTGGGAGACGCGCTGAAGTTGATTCGGAA 15959 37 100.0 38 ..................................... TCGAACGAACCACACTCGGAACAATCTTGTCTCATTGT 16034 35 78.4 0 CG...T.-.-G.T........A............... | ========== ====== ====== ====== ===================================== ========================================= ================== 31 37 99.3 36 GTCGAAGCACCGAAGAAACCCGCACCGGGATTGAAAC # Left flank : GCACTTCGAGTACGAGGTAAGCCGTCGGAAGGCAATTCATCAGCAAGCAATTCTGCTTCGGAAAGCGATCACTGGTGAACTGGACGAATATCATGCGCTGGAGGTACAGCGATGAGACTGGCGGTAACGTACGACGTCAGTGATGACGCCAATCGCCGGCGTGTGTATCGGACGCTCCAGCGGTACGGAGCATGGCGACAATATAGCGTCTTTGAGGTAGATGTCTCGAAGACCGAGCGCGTCAAACTAGAGGACGAATTGGCCGAGCAGATCAATGAGAAAGACGGTGATCGGGTTCGTATTTATCGGCTTTGTGAGTCCTGCCTTAGCGACATTACCGATCTCGGGACCGAGCCGCCGGACGACCAGTCGAACGTGATCTGAGAAGCTGCTTCGTCGACCCTTTTGAACCCTGTGTACAGCAGGGGTCGATGAACGATCCAGACTGAGTCACAGCTTGAACACAAACTATAGTACCTATGCGGTTGTTATCACCCCCT # Right flank : CAACTGTAATGAGGCCATCGTCTAGCCAAAGAGCGAACAGTTCTTGGAGACGGATGTTATGGCCGCCCAAGAACCGTTCACCGTCTCTTTGGACCCGAATCCGCTTGAGTGCTGGGACAACGAGAGCACCGCGAGCGTCTCAGATTGCTCGCGGTGCGGATTCACCCGACGGGTGTGGCATCCAAGGAAGCAGTTCGCATTCTCGGCCAAGAGAAGGTTATCGACGAGCAAACGATGAATACGCTCGTCGCAGCGATCGGGTTTCGGAATGTCCTCGCTCACGAGTACGGCAGAGTGGATTACGTTGAGGTGTACGAGACGCTCCAGACCGGACTGGACGTCTATGACTCGTTCAGTCGGCAAATCGCACAGTGGTTCCGCACTGAACGCTAATCCCTACCATCATAGACCGATGGAAACTACCGTTCTTGTTCTCTTTGTCGACCGTCTAGCGGCAACTTATGATAATCGCTGTTCGTGGCTGTAGTCACACAGAATAG # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:0, 3:3, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGAAGCACCGAAGAAACCCGCACCGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: F [13,3] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-4.70,-5.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [53.3-53.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : NA //