Array 1 682179-685755 **** Predicted by CRISPRDetect 2.4 *** >NZ_LR699017.1 Faecalibacterium prausnitzii isolate MGYG-HGUT-02545 chromosome 1 Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= =================================================================================================================================================================================================================== ================== 682179 33 97.0 35 ...........T..................... AATAATCCAGTGCTCATTTTTTGATCTCCTTCGGT 682247 33 97.0 35 ...........T..................... ATTCCATTTTACATTCCTATGCACTTAGGAGACCC 682315 33 97.0 34 ...........T..................... AAGACAGTTGCAACGCGATTGATGCCGGAAGAAT 682382 33 97.0 33 ...........T..................... CGATCTGGAAAACAATGTGTATGAGACGAACGA 682448 33 97.0 36 ...........T..................... CTGCGTCTGCGGCCGGAGCATACCGAAGCTCACGTG 682517 33 97.0 35 ...........T..................... CGCCTCCGGTGCGCTGTTGCCGTCGTACAGCGTCG 682585 33 97.0 33 ...........T..................... TGCTCCGATTTAATGCACCGGACCGCATACCGG 682651 33 97.0 35 ...........T..................... AGCCGCTCTATCGGGACGTTCCGCAGCCCGGACCG 682719 33 97.0 35 ...........T..................... ATAAGCAGCCTGCGGGTCAGGGAACAGACCGGGCG 682787 33 97.0 35 ...........T..................... TCGCTACCAGTGGCACTAGGCATGGCAGTCAGGCT 682855 33 97.0 35 ...........T..................... TCTTGTGTCTCCTTCGATAACGCCCTTGCATCTGT 682923 33 97.0 33 ...........T..................... CTCAGTCGTACGGCTCAGTGAGCAAGAGCTGAG 682989 33 97.0 36 ...........T..................... TTTTCCAGGCCGCACTCCACCATCTTGCTGCTGGCC 683058 33 100.0 34 ................................. ACAAATGAAACGGGTAAAAAATTAGTTGGAAATG 683125 33 100.0 34 ................................. AATCAGGATAACACCCTTGCAGACACGCTTATCC 683192 33 100.0 35 ................................. GACGAACGCAACGGCAATTTCGAGGAAGCAAAGGA 683260 33 100.0 34 ................................. CTCCTTGTCATGTAGCGCGTGATAAATCGCGTCC 683327 33 100.0 34 ................................. CCGTTCTTCCCGAAAGAAACGGCAGACCAGTTGG 683394 33 100.0 36 ................................. ATCCACCCGGCGGGCATAGGCCGCGCTGGCAAGAGC 683463 33 100.0 35 ................................. GTAAGAAGAAGCTCGGTGCAATCAAAATCGGAAAG 683531 33 100.0 35 ................................. CGTCATCAGAGTAGCGGACGGCAAAGTAGCCGCCG 683599 33 100.0 34 ................................. ATCCAGCTCAGGCGCTCAGTGTTGATACCTGCAT 683666 33 97.0 33 ..............A.................. ACCTCATAGCCTTTGCCAAGCGTCGCGTCGCAA 683732 33 100.0 33 ................................. GGGTCAAACTTGAGGCCGTCCCGGTAGCCCTTC 683798 33 100.0 34 ................................. AGCGGTGCAGGCTCAACCACGGTGGGAGTGCTGG 683865 33 100.0 33 ................................. AGCGAGCTTTACAGCATCCCGGCATGAACGCCG 683931 33 100.0 34 ................................. CTGCTGGCTCGGCTCAACGCCCAGCGGCATCCCA 683998 33 100.0 33 ................................. TTTGCGTTGTACCGCGCCGGTCCTGCGACGGCG 684064 33 100.0 34 ................................. CCCCCAAGCGTGTGGTAGCTGCGATAGAGGTACT 684131 33 100.0 34 ................................. TGTGCGCTGCGCCGCTCCGGTGCAGGCAGGTCAA 684198 33 100.0 34 ................................. ACCCACGGACGGGAGCTCACATGGCAACCCTCAG 684265 33 100.0 34 ................................. AGGCTGTTGTAGTCGCTGAATACGCCGCTCCGGC 684332 33 100.0 34 ................................. TACTCTCGTCGTGGATGCAATACCTACAATTTTT 684399 33 100.0 34 ................................. TGCCTCGTCACGGGTCAGATGCGGATGCGGCATC 684466 33 100.0 35 ................................. ATGTACCCGTTAGCAAAGGCCACCAGGCCGTTAGT 684534 33 100.0 36 ................................. ATATTATCATTGATCGTATGAAGAGATCCAGAAATA 684603 33 100.0 33 ................................. ACGACAACAGCATACTTTCGCACACCACGGCGG 684669 33 100.0 34 ................................. TCGTGGTGGCCTTGCCCATATCCAGTGCTGCTTG 684736 33 100.0 34 ................................. TCGCTGGCCAGAGGGCAGCCATGCGCACTGCATC 684803 33 100.0 35 ................................. ATCAGACCGAAAGCATCCAACCAGTCGAAGAAGTC 684871 33 100.0 35 ................................. CGACCTCGAAGCTGCAGGCAGTTTACCGCAAGTTT 684939 33 100.0 35 ................................. ACGCTGTATTTACGGTTGGATAGCTGGCTGATTTG 685007 33 100.0 34 ................................. TGACGGCAAGACCCAGCGCGTGGATGACCTCTTT 685074 33 100.0 35 ................................. ATGAGAAGCTGGGCATCAAGGATAAGTATACCGAT 685142 33 100.0 36 ................................. TTCGATCTTCTCGCGCAGATGGAACGGCTCATAGGC 685211 33 100.0 34 ................................. CGGCCAGCCTGACCCTCCAGACCCGCCGCAGAAC 685278 33 100.0 35 ................................. GGCAAGAAGTTTGGCTTCGCACTGGATGTTCTCAC 685346 33 97.0 34 ......T.......................... ACCGCATAACCCCACTGGAAAACGCCATCACGCA 685413 33 87.9 211 ......................CAAG....... CGACACAAAAATATGGTAAACTTTTATTAAGTTGTTGCCATGCGTTCTCTAAGGAACCGAGTATTTTGACCTACAATTCCGTCTCTTAAAGATGTTGGTTGAAATCAATTTGTGTTCCCCGGTGCATTCTTCGACTTGAAGTCGCTCCTATTTGAGGGGTGTGGATAAAATAACATAATAATCATATCGCGGTTCTCAAAGGCGTAACCAA 685657 33 81.8 33 .A..T....T..A.C........A......... TGTCACAACCACGCCGGTCTTTTCAGCATCAAG 685723 33 78.8 0 ..T.......C...AA....TAC.......... | ========== ====== ====== ====== ================================= =================================================================================================================================================================================================================== ================== 51 33 98.1 38 GTCGCCCTCCTCGCGGAGGGCGTGGATAGAAAT # Left flank : CATTTTTCTGGAAGTGAGGGATGTGTATGCTGGTCCTTATCACCTACGACGTCCATACCGAAACTCCTGCCGGGCGCAAACGTCTGCGCAAAGTCGCCAAGCGCTGTGTGGACCACGGCCAGCGGGTGCAGAACTCCGTGTTCGAGTGTCTGCTGGATGCCGCGCAGTATGCCGTTCTCAAGGCGGAGCTGACGTCTCTCATCGACCCTGCGCTGGACAGTCTGCGCTTCTACCAGCTGGGCAACAACTATAAGAGCAAGGTGGAGCATATCGGCGTTCATCCGCCCTTCGAGCAGGACGGCCTGCTGTTGTTCTGAGTTTCCCGCCCCGGTGCGAAGGACGAGTTCTCAGCATTTTTCCGGCACCTTCGCACCGGATTTTTGTGTCATTTTGCATGATTTGGATAGCTCTTTGACCCGTTGTAAATCAAGGCTCTTCTAAATTCGTGCAGAATGTTGTATAATTTGTTTGAAAATAGAGATTTTGTCTCTGTTTTTGCT # Right flank : TCAGTTTCCACCTCGAATCGGGCATCGCCACAATTTTTCCAAAAAGGAGTTTTCCATGCATACCGTTCCCCTTACCCATCAGCTCGTCACCATTCAGGACGACTTTGACCTCGACAAGATCATCGAGAGCGGCCAGTGCTTCCGGCCGCAGAAACTGGCCGACGGGCGCTACCGTTTTCTTTCCGGCGGCGCACTCCTTTATCTGACTCCGCTGGGCGCTGGGCAATACGACGCTGCATGGTATGGCTCAGATTGGGAGTGCTGGGCCAACTACTTTGATTTGGGCCGGAACTATGCCGCGCTGCGGTGCAGCTTGGCGGGACAGAGCAGCTATCTGGACAAATCGCTCGAATTTGGGCAGGGCATCCGAATCCTGCATCAGGACCCATGGGAAATGCTCATCACCTTTCTTATCTCCCAGCGCAAGAGCATTCCGGCCATCCGCACCGCCGTAGAACGTCTTGCCCGGTGCTGCGGCGAACCGCTCAGTGCCGAAGGCG # Questionable array : NO Score: 5.83 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:-0.32, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCCCTCCTCGCGGAGGGCGTGGATAGAAAT # Alternate repeat : GTCGCCCTCCTTGCGGAGGGCGTGGATAGAAAT # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [6,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCCCTCCACACGGAGGGCGTGGATAGAAAT with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-8.60,-8.50] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-18] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [71.7-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 1072542-1073162 **** Predicted by CRISPRDetect 2.4 *** >NZ_LR699017.1 Faecalibacterium prausnitzii isolate MGYG-HGUT-02545 chromosome 1 Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 1072542 32 100.0 33 ................................ GCGAGAGCATAGAAGATGAGCTGTCCGACCTCG 1072607 32 100.0 35 ................................ TCCCCGGTGCAGCCCCGGCGGATGGTCGGCAGAAT 1072674 32 96.9 33 .......T........................ AGAACTGCAGTATGGATGTCGTTCACGCGGTAG 1072739 32 100.0 33 ................................ ATCAAAGATCTTTCTAAACTCCTCGATATCGTA 1072804 32 100.0 34 ................................ GAGCAAGTGCTTTCTGTTCGTCGTAAGTCATCAC 1072870 32 100.0 33 ................................ ATCAAAGATCTTTCTAAACTCCTCGATATCGTA 1072935 32 93.8 33 ...............T...............T TTCACTTTCTTGATCTGCTTCTTTTCGGCACGG 1073000 32 96.9 33 ....................A........... GTCACAGCTTGCTGCTTGTCCAGTTTGGCGTCC 1073065 32 100.0 34 ................................ GACCTTTGCCATTGCCTTCTTGTCCTTGCGGCTC 1073131 32 93.8 0 ........................G...A... | ========== ====== ====== ====== ================================ =================================== ================== 10 32 98.1 34 ATTGCAGCTTATCCCCGCAAGGGGACGATAAC # Left flank : CGGCAAGGTGGTCGATCTCGTCTTCCCTGCCATCGACCCCGCCGCCGACGAGGCCGCACTGGACTCCCTTGCCACGGTATACGCCGACCACATCCTGCACCTTAACCCGGACGCCGTGCTCTGTCAGGGCGAGTGCACCTTTGTGTACCGGGTAGTCCAGCGTCTGGAAGCTGCGGGCATCCCCACGCTGGCCGCCTGCTCCCGCCGCAAGAGTCAGGAGACCACCTACCCGGACGGCAGCACCCTGAAGCGCAGCATTTTTGTGTTTGCCGGGTTCCGGCGATATGGCCCGATGCCCTGAAGTCAACAGTTCGGGGTGCGAACCTCCTTTTCTACCGCCTAGTTTTCCCCAATCTGGCACAGAGTTCGCACCACCAATTTCCAACTTTTATTCGGAAATATCTTTTATTTTTGCAGTCAATGTGCTATATTTATCTTGTGATTGCAGAACACACCTTAAAAAACGCAGGAAAAGAGTTTCTTTTTGGGGCAGTTCTGCT # Right flank : CAAACTCCATTCTTATTTCAGATTAAATAAATAAGTACCATCCCCGTAAGGGGGCAAAAACTCCGCGTCAAAAAAGATGCGGAGTTTTTCTTTTACAAAACTTAACTCTTTGGTTTCCGTGGGCTGTCCCTCTATGAACGGAACGATTGCAGCTGCTGTGATATTTTCTCTGCTGCGGCTTTTGCATAGCGACAAAATGTGTTATAATAAAGCCAATTCCAAGCATCTCTTACAAAATTGACAAACACGTTTTCCGTTTATTGTGCAATTCTTCCACAACCCGTAAAGGAGATGGTATTTTGAACGTTCTCACCCTGCAGTCCACCTATGGCGGGCTGCTGCACGACACCGGTAAAGCGGTGTACCGTGCCGGTGGGCAGCGCGGCAGCCACAGTGAACAGGGCTACCAGTTTTTGCACGGCGTTTTGCCCGGTGCAGGCTGGGCACCGGCGCTGGACTGTGTGCGCTACCACCACTCCGCCGCGCTGCGCGGTGCAGCA # Questionable array : NO Score: 3.16 # Score Detail : 1:0, 2:0, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGCAGCTTATCCCCGCAAGGGGACGATAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [9,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-9.10,-9.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.37 Confidence: MEDIUM] # Array family : NA //