Array 1 1647332-1647898 		**** Predicted by CRISPRDetect 2.4 *** 
>NC_023134.1 Paenibacillus larvae subsp. larvae DSM 25430, complete sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                 	Spacer_Sequence                      	Insertion/Deletion
==========	======	======	======	================================	=====================================	==================
   1647332	    32	 100.0	    32	................................	TTGTTTCGATGCTATATTTATACGCATCAATA     	
   1647396	    32	 100.0	    36	................................	AAGGGAGGGGATTTTCAGACTCAGTTTAGACTATAC 	
   1647464	    32	 100.0	    37	................................	ATTACAGGGGCAGGGAGGTACAGAAGATAGGAGGTAC	
   1647533	    32	 100.0	    34	................................	ACTAGAGCAATGAGCATTAACGGGATTCCAATCA   	
   1647599	    32	 100.0	    36	................................	AAGGGAGGGGATTTTCAGACTCAGTTTAGACTATAC 	
   1647667	    32	 100.0	    37	................................	ATTACAGGGGCAGGGAGGTACAGAAGATAGGAGGTAC	
   1647736	    32	 100.0	    34	................................	ACTAGAGCAATGAGCATTAACGGGATTCCAATCA   	
   1647802	    32	 100.0	    32	................................	CAATTAAGCCGACCGCCATATAGCGTGGCTAT     	
   1647866	    32	  84.4	     0	...............A..AGT..A........	|                                    	C [1647894]
==========	======	======	======	================================	=====================================	==================
         9	    32	  98.3	    35	GTCGCATCCTACGCGGATGCGTGGATTGAAAT	                                     	       

# Left flank :   ATGCTAGTTTAACCATATTACATTTATTTTTTGAGGCATATTGACTAATAAATGAATAGGGAAGGTGATGGGAGGGCATTTGAATTGTGGAATTGGGTTTTCCATAGAGGTAAATATATGCCATGCTGGATATTTCTCGCGCTAGTAATGGAAGCTGATATGGGGTATTATGGAAGTGAAAAGGAGTGTACTTCTGTAATTGGACATTTGTAACTGACAAATGTTTTCATAAGCAGGTGATAGGGTAGATATTACGTCAATCGATATTAAGGCTAACGGGTGTAAAAGAAGTAATTGATTTGGAAGGTCTATTCATTTTCTAGTGCGAATGTATAGTGCACATGAAAATCCCGGGAGATTCGCACCATTATTTCACCAAAAATATACAAATATCTGGATATAGGTATATTTGATTGTAATAAATTTGAATCAAAAAATCATTATTTGAATGATTTAATCAAAAAAATGTTCAATTTTGATTGTTTTGTTCAAATTTCGCT
# Right flank :  TAAAAACTAGAGGCTTTGACCACTATCAACTGTGCCGTGCGATCGGACGGAACGACGCGAAAAGGCATCCTATTTTGTGAACTGCACCCTGTCAAGTAGACAGTACAAATAATAAAAATTAGTTAAGCGGCCTTGATCCTGAATTCCATCGGACTAAGGCCGTTTAATTTCGCTTGTAATCGCTCGTAATTGTAAAAGTAAATGTAAGCCTCAATGTCCCTTTCGAGATCTTCAAAGGTATGGTAAGTATGCAAATAATACTTCTCACATTTTAGGGCTCCCCAGAAGGATTCCATGGGGCCATTATCGATACATCTGCCAACTTGAGACATGCTCTGCATGATGTTTCCTTTCTCCAGGATCTTTTTGAATTTTTGCGAGGTATATTGAAAGCCCCGGTCACTATGCAGCATGGGCCTGCTGCCCGATGCCGCTTGTATCGCCTTGTTGACGGTTTGAAACACGAGGCTATTATTGTTGGAGTGCCCGAAAACGTAAGA

# Questionable array : NO	 Score: 9.17
# 	Score Detail : 1:0, 2:3, 3:3, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTCGCATCCTACGCGGATGCGTGGATTGAAAT
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         F Score: 4.5/4.5
# 	A,T distribution in repeat prediction:     R [7,8] Score: 0.37/0.37
# 	Reference repeat match prediction:         F [matched GTCGCACCCTTCGCGGGTGCGTGGATTGAAAT with 91% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  NA [-9.00,-9.20] Score: 0/0.37
# 	Array degeneracy analysis prediction:      F [0-6] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: F [80.0-48.3]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [9.68,0.37   Confidence: HIGH] 

# Array family : I-C [Matched known repeat from this family],   
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