Array 1 789941-794023 **** Predicted by CRISPRDetect 2.4 *** >NZ_QGDB01000002.1 Falsochrobactrum shanghaiense strain HN4 HM4_scaffold2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ==================================== ================== 789941 33 93.9 36 ...............................TT AATGTGACACCGCAGGCTCTAGCGCAGCATATTGCG 790010 33 93.9 34 ...............................TT TGATGGCAAGTGGTCAAACAATGGCACTGTTACG 790077 33 100.0 33 ................................. CATATAGGCCATAGCTCAGATTTAGGCTGCCGG 790143 33 97.0 33 A................................ ATCGCGCCCAAACAAGTACCAACTGCAATTGTC 790209 33 100.0 34 ................................. GGCGTTAGGTTATCCATTGGTGACACTGCTACCC 790276 33 100.0 34 ................................. ACCTTTACCCCGGACATATAAGGGGCGGCTGCGG 790343 33 100.0 33 ................................. ATCCAATCCACCGGATGACGGCTGAATGCGATT 790409 33 97.0 34 G................................ TCCAGTCTTTATCTTTGATAGCTTAATTCTGAAT 790476 33 97.0 33 G................................ CCCTCCACCATAAAATAGGTGCTAAACTGCCGG 790542 33 100.0 32 ................................. CAGAAGCCTGCATCGCCACTGTCTGCCAAAGT 790607 33 100.0 33 ................................. CGGTAAACACGGATTACCCGGAATGGGCTTCCG 790673 33 97.0 34 G................................ ATTCATTTGGCAAAAGCAGCAACCCGATTACCGT 790740 33 97.0 32 A................................ CATCTTGAGGGTAGCAACCTTCGCAGTCTTGG 790805 33 97.0 36 C................................ ACCATCAACCAGAGCCTTAAGCAATGCGCGATAGAT 790874 33 97.0 34 G................................ CACCATTGGCATTAGCTGCGCGGATGGCAGAGTT 790941 33 97.0 33 C................................ AACCAAAGCCTCTCAATGAGAAGGCAGCCGAAC 791007 33 100.0 33 ................................. GATCAACGGCGCAGAAAGCCACGTGCCACTGCC 791073 33 97.0 33 C................................ ACCGCGCGGGATATTTTTAGCCTTTCGAATGGA 791139 33 97.0 34 A................................ CGACAGATGTTGCGAATGACAGCTCTCGTATCCG 791206 33 97.0 34 A................................ TTCTGTGGTGGCATAAGGGCCGTACTTCCACGGC 791273 33 97.0 33 G................................ TCCTGCAATGGCACGATGTCAGCTGCTGGATGA 791339 33 100.0 35 ................................. GCCTGTACCTTGAGCACATCAATCGGATCGCAGCC 791407 33 97.0 33 C................................ TCGGCCTGCATGGCATTGACCAGACGCGGTGGG 791473 33 97.0 33 A................................ TTTGCACCAAGGATTTTTACGTCCAGGAGAGCG 791539 33 97.0 33 G................................ ATGCCCATGGCCGCCGTCATGCCGATGTCCTGA 791605 33 97.0 34 A................................ CCGATCGGGACGCGCAGCATCGGATGGAAATCCA 791672 33 97.0 33 G................................ AGTTCATCGAACATGAGAGCTTTCGTGCCGCCT 791738 33 97.0 32 G................................ ATGCGCGGCAACTTCCATCGCCACGTCATAGT 791803 33 97.0 32 C................................ CACTGGTAGCGGTGCCAGTGCCCGCTGCTGCC 791868 33 97.0 33 C................................ AACGAGCGCGTTGGCAACACCACCCTTCAGGAT 791934 33 97.0 35 G................................ ACGGGTTTGGCTTAGGATAACCTCTTCGGTGTAGA 792002 33 100.0 35 ................................. ACAGCAAGGTTGTGCGCACGATCATTCGCTTGCGC 792070 33 97.0 32 A................................ GATGGGAAGGACAAGGTGGGCAACCTTCATGG 792135 33 97.0 32 C................................ GTCATTGCTGCAACTGCTGTCGTCATGGTGTT 792200 33 100.0 33 ................................. TGCATCTGCATGCGCGGTACATCACCGCCTTCG 792266 33 97.0 33 A................................ AACCATGATTACCCCGTTGCAACGCCGCTCTCG 792332 33 97.0 33 C................................ CGCGTACCGGTTTGCCCGCTCTTCCGCCTCTTG 792398 33 97.0 34 C................................ ACCAACAAATCGGCCCATCGATCAGCAGTGACGC 792465 33 97.0 34 G................................ ATCAATTTTCTGGATGCAATCACACATGGCCGCA 792532 33 97.0 32 C................................ ACCTCTACGACCACGACATCGCCAGACTTCGG 792597 33 97.0 34 G................................ AATTTCGATGAGGGAAATCATGACGGGTAAAGAT 792664 33 97.0 33 C................................ GATCAGAACCGCCATGAAATCGTCGGCCCGTTG 792730 33 100.0 33 ................................. CGGTCTGGGGCGCGGGAATGCAAAAACGTCTGC 792796 33 100.0 33 ................................. AATCTCTGCCTCAACTGATCCCACACGGTCACG 792862 33 97.0 33 C................................ GCCGAAACCGCGCCCAGCATGTCGAGGCAATAT 792928 33 100.0 34 ................................. GTAGCGCTGGTTTTTATCATTTGTCGATCGACGG 792995 33 97.0 34 G................................ ATTGCCAAGTCCGTCTTTAACGACCAACAGCTTT 793062 33 100.0 33 ................................. ATCCTGTCGATCCCGGTATTCTTCATGGGTGAG 793128 33 97.0 34 G................................ ACGGTATCCAGTCCATCACAACGCCTCGCCTGCC 793195 33 100.0 33 ................................. CACAACATCAATCCGTCGCATCGATGAACGCGC 793261 33 97.0 33 G................................ CGAAGCTTTCGACAAGTTTGCCAGGCACGGTCT 793327 33 100.0 35 ................................. TCCGATCACCCGGCGCATGAAATCCATCGCGGCCC 793395 33 100.0 33 ................................. TTTGCCAGCGCCACGCCCGTTGTGTCACCCTCA 793461 33 100.0 33 ................................. TGATTTATGCGGTGTTCGCAATTATCGGATTTT 793527 33 100.0 33 ................................. GCTTTCAACATTTTTCATGCGCTCATCGTAACG 793593 33 97.0 33 C................................ GCGGCAACGACGCAAGATCCGCTGCCCGAAAAT 793659 33 97.0 32 A................................ ATCCTTGTATTCGGCTTGTGCTTTCGGCGACA 793724 33 100.0 33 ................................. GGTATTGGCATGTGGTCCTGGCTCCGTTGTTCC 793790 33 97.0 34 G................................ CAACTAACTCCTCCTGCTGGCAAGCCGGTCAGAA 793857 33 97.0 35 A................................ GTGTATTTATCCCATAACCATTGCAACGTCCCGAT 793925 33 97.0 33 C................................ TTTGCCAGCGCCACGCCCGTTGTGTCACCCTCA 793991 33 97.0 0 ................................T | ========== ====== ====== ====== ================================= ==================================== ================== 62 33 97.9 33 TGTCGCCTCCTACGCGGAGGCGTGGTTTGAAAC # Left flank : AGCCGGAATGCTAGTTCTAGTCACCTATGACGTCAATACGACTGAGGCGCGGGGCACCGCACGACTGCGCGCAGTAGCCAAAGCCTGCCGCGACTATGGGCAGCGTGTGCAGTTCTCCGTTTTCGAAATCGAAGTAGATCCGGCACAATGGGCGAAACTCAAGGCCCGACTTGAAAGCATCATCAAACCGGAATTCGACAGCCTACGTTACTACTATCTCGGCTCCAATTGGCAGAGACGGGTTGAACATGTCGGCGCCAAACCCGCCACGGACCTTGGCGGTACATTGATCGTCTGACGCAGAAGCAATATTGGCGAATATCGGTGCGAACCATAAGCGTGTCGCGAAATGCCGTCAGGTTCGCACTCGGTTAGCTCTTTGAAATCGTATAAGAATTTTAAATATCGGCCTCGCCGGAGCGATCGCTGTCACCACTTTTGTTATATGCGCGCAATTTTCTAACTTTTTTGTTCTGCGCCAATTGATTAGACAAGGACAG # Right flank : TTGGTGGCGTAGTGATGTAACCTCATTTTTCGATGCTTCGACCGCCAACGACAATCGCCGCTTCCGTCAGATTGATGCTTTATGCGCCGCCAGCTTTGCGATGAAGGCGGAAGCCGCCAAGGAAGCGGGGGCGCTTGGTTTCATAGCGCGGGCAATGGTGCAGGCGACCATGCCACACAGCAAGGCTGACGGTAATGAATTTACCTGCACCAATGGCGCGTACACACTAAGTATGCTTGCCCCGTCGCGCATCGGCCTTCCCTATGGCAGCATTCCGCGCCTTTTGTTGGTTATTTGACCACCGAGGCGGTGCAGCAGAAACAGCGGGAAATCGTCCTCGGTACAAGCCTTAGCCGCTTTATGTCGGAATTGGGATTGGACGCGGCGGGCGGACGTTGGGGTTCTATTCCACGCCTGCGCGATCAAGTGACACGCCTTATGGCGTGCTCGATCTCTTGTACATGGGAGAGCGAACACGCCCTTTCTATTGGAGAATATAA # Questionable array : NO Score: 5.57 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.41, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TGTCGCCTCCTACGCGGAGGCGTGGTTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,7] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CGTCGCCTCCCTCGCGGAGGCGTGGATTGAAAC with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.90,-6.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [63.3-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //