Array 1 1-728 **** Predicted by CRISPRDetect 2.4 *** >NZ_BJSW01000120.1 Flavobacterium psychrophilum strain NNS2-1804 contig00120, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================================== ============================== ================== 1 46 100.0 30 .............................................. AATCCCCCAGAAAACAAGCTAAATGATTCC 77 46 100.0 29 .............................................. TTGTTCAATTTAATGAATAAGGTAATTGT 152 46 100.0 30 .............................................. GGATAAATAGTATACGGCAAATCTAACTGA 228 46 100.0 30 .............................................. CCATTTGGGAAGCACAATTTGGCGATTTCA 304 46 100.0 30 .............................................. TAATTTAGAATTTTTCATTTTCCCTCATGG 380 46 100.0 30 .............................................. TTATTGATACCTTATTTGAATCTACTTTTA 456 46 100.0 30 .............................................. GCGTACTCACAAGGGAAGATTCATCCAACA 532 46 100.0 30 .............................................. ACGCTTGACAAAAAATTAAGCCTATTTTTG 608 46 100.0 29 .............................................. TCTCTGCTTCTAATGAACAGACTCTTTAT 683 46 100.0 0 .............................................. | ========== ====== ====== ====== ============================================== ============================== ================== 10 46 100.0 30 GTTGTGAATTGCTTTCAAAATTGTATTTTAGCTTATAATTACCAAC # Left flank : | # Right flank : CAG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGAATTGCTTTCAAAATTGTATTTTAGCTTATAATTACCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.91%AT] # Reference repeat match prediction: F [matched GTTGTGAATTGCTTTCAAAATTGTATTTTAGCTTATAATTACCAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.00,-0.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [0.0-1.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], // Array 1 48-1309 **** Predicted by CRISPRDetect 2.4 *** >NZ_BJSW01000115.1 Flavobacterium psychrophilum strain NNS2-1804 contig00115, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================================== =============================== ================== 48 46 100.0 30 .............................................. CGTAACTGATCCACCGTGATTTACGTTTCC 124 46 100.0 29 .............................................. ATAAAAAAGAAATAGAGAGTATAGATAGT 199 46 100.0 30 .............................................. TTTTTTTAAAAACAGATAAAGAGCAACTTC 275 46 100.0 31 .............................................. TGATGTTGTGGTTTATGATTTTGGTGATAAT 352 46 100.0 30 .............................................. ATAGAAGATCAGCAAGAACTAGATAGTTTA 428 46 100.0 30 .............................................. TTTAACGTTATGGTGCATTAGCAAAAAATA 504 46 100.0 30 .............................................. TATCTGTTTGTTTGGTATCATTGCGGGTGC 580 46 100.0 30 .............................................. GTTTATAAATGGAATGTATTTTAAAGTTCC 656 46 100.0 30 .............................................. TGTACAATTGTTCATTTTTTGGTCTAGCAA 732 46 100.0 30 .............................................. AAATATGCTTTCGTTTATGCCGACTAAAGC 808 46 100.0 30 .............................................. TTACATACATAATCAATGGATATGGTTGTT 884 46 100.0 30 .............................................. CCTGAATAGATTCTTTTCCGTATTGTTTTT 960 46 100.0 30 .............................................. TCAAAGAATATAAAGACGCTAAAGATGCTG 1036 46 100.0 30 .............................................. TCACGATGTATTTAGAAAATATGGTTATCC 1112 46 100.0 30 .............................................. TGCTTGTAGTAGCTGTTAGTGGCATACCAC 1188 46 100.0 30 .............................................. CGCAAAAATATTATTACTAGGAGCAATCCT 1264 46 100.0 0 .............................................. | ========== ====== ====== ====== ============================================== =============================== ================== 17 46 100.0 30 GTTGTGAATTGCTTTCAAAATTGTATTTTAGCTTATAATTACCAAC # Left flank : AGCTTATAATTACCAACCAGGTAAAAATCTAATAAGCGTACCAGGTAG # Right flank : CATACCGCGAGTTAATCGTTTGATATGTTGGTGGTTATATGCTTATTTTGAAATTAAAAAACAGTTCTGTTTGTGTGTTGATATTCTGGTAGGTCTAATATTTCTAAATCCTATTTTTCAAAAAAGTTCTAATTGTTGCGAAGGTTTGTCTGTTTCTACAGGTTTTTTTCCATAAAAAAGCTCCATCATACCAAATTGTTTATCGGTTATTTGCATCACACCAATTTTGCCATGTTCGGGCAAACTATTTCTTATTCTTTTGGTGTGTACTTCGGCATTTTCTCTGCTGGCACAAAACCGCATATAGATCGAAAATTGAAACATAGAAAAACCATCGTCCAATAATTTCTTGCGAAATTCACTGGCAATTTTACGCTCTTTCCGCGTTTCGGTGGGCAGGTCAAAAAATACTAATATCCACAAACTTCTATACTGGTTTAAACGGGTGTAATGTTCGTCATACATAAATAGGGTATAAAATTTTTCTTGCGGCTCCCGCA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGAATTGCTTTCAAAATTGTATTTTAGCTTATAATTACCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.91%AT] # Reference repeat match prediction: F [matched GTTGTGAATTGCTTTCAAAATTGTATTTTAGCTTATAATTACCAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.00,-0.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [51.7-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.27 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], // Array 1 1323-62 **** Predicted by CRISPRDetect 2.4 *** >NZ_BJSW01000131.1 Flavobacterium psychrophilum strain NNS2-1804 contig00131, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================================== ============================== ================== 1322 46 100.0 30 .............................................. TTGTCCATTCTAGCAGGTAGTAGAGATATA 1246 46 100.0 30 .............................................. ATTTCTTCATTAAGAAGCCGCACGTTAATA 1170 46 100.0 30 .............................................. AAGTCGTGAATAAAGATATACACGACCCTC 1094 46 100.0 30 .............................................. ACTATGATTTTTAATAATCGGATTACCTGC 1018 46 100.0 30 .............................................. TTTGAAATCTTTTCTTGCTTGTTCAGTTAA 942 46 100.0 30 .............................................. TTTGGATCATTCCGCATATTTGCATCATGC 866 46 100.0 30 .............................................. TGAAACTATTGAGGTAACAAATGAAATGTA 790 46 100.0 30 .............................................. ACGACCTACCTTATTAACAAATGACTTTTC 714 46 100.0 30 .............................................. ACGAATTAATAGCTTTTAATAACGCGTTAT 638 46 100.0 30 .............................................. CTTTCGCAAAAGGAGTTGATTCAAAAAATG 562 46 100.0 30 .............................................. AGAATAACAAGAGATACTAATACATCATTT 486 46 100.0 30 .............................................. CTATTCATTGAATAAGCATTGAAGGTATCA 410 46 100.0 30 .............................................. TTGATGACTGGGAGAGCCATTATGACGTAG 334 46 100.0 29 .............................................. ACATTACAATATAATTACGGCTTTGAATA 259 46 100.0 30 .............................................. TTTGCCCAACAGACCCTTCTCCTAATTCCG 183 46 100.0 30 .............................................. ATTGAGGTACTTAACATTATTATCGCCACG 107 46 100.0 0 .............................................. | ========== ====== ====== ====== ============================================== ============================== ================== 17 46 100.0 30 GTTGTGAATTGCTTTCAAAATTGTATTTTAGCTTATAATTACCAAC # Left flank : AGCTTATAATTACCAACCAGTTTTTTGAAATGGGTGTAGATATTCT # Right flank : CTAGTTTTTTGAAATGGGTAGATCGGAAGAGCACACGTCTGAACTCCAGTCACTCCGGAGAA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGAATTGCTTTCAAAATTGTATTTTAGCTTATAATTACCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.91%AT] # Reference repeat match prediction: R [matched GTTGTGAATTGCTTTCAAAATTGTATTTTAGCTTATAATTACCAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-0.90,-3.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [53.3-55.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.87 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //