Array 1 182034-179690 **** Predicted by CRISPRDetect 2.4 *** >NZ_WODS01000007.1 Klebsiella pneumoniae strain NEF198 NEF198_S10_L001_NODE_7, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 182033 29 100.0 32 ............................. GCCGACATGCTGGGCGCGATCACAACGGTTAA 181972 29 100.0 32 ............................. GGCGCGGTGTGGTATTGGGTGAAACTGGACGA 181911 29 100.0 32 ............................. GCACTTTACCTTCGAGGTCGTTCCCTTCGAGG 181850 29 100.0 32 ............................. ATGTATGGATCGAGCCAGGCGCAACCACGAAC 181789 29 100.0 32 ............................. CCAGGGCTTTCGGACCGTCAGGAGCAAATCAA 181728 29 100.0 32 ............................. TAAACGGCACAAGCGGCACCTGCGGCCAGGTG 181667 29 100.0 32 ............................. CGTGTCGGTCATGGCGATGCTGGGCGGCGATA 181606 29 100.0 32 ............................. CGCCTGGGGGGATCGCGGTGAGTGATTCATTT 181545 29 100.0 32 ............................. CGCCTCAACAAATGCGACTTCATAGCCTGCTG 181484 29 100.0 32 ............................. GCTCGGTGTGGCCTAAATCAATTCGCGGATCC 181423 29 96.6 32 ............................C CTTGCATACGTGTTACCCTCCATAACCTCACA 181362 29 100.0 32 ............................. CGTCGCCTGGCCGTCTGGTAAGTCCGGTTTTA 181301 29 100.0 32 ............................. CAGATATCGGCACCGCGAGGTTCTGAGTCGTA 181240 29 100.0 32 ............................. AGATCGAATAGTCGTAGTTTGTTTTACGGCAG 181179 29 100.0 32 ............................. CTGGAACGGACCCTGAGCGCCTTTGGGGGAAA 181118 29 100.0 32 ............................. ATTTCTCCGGTTGCCCCGGGTTCCCGGGGCAT 181057 29 100.0 32 ............................. GTGCTGGCCTTGAGCTTTTCAGCAATACGTCC 180996 29 100.0 32 ............................. TGCAGACGCGGCACTTTTACCCACGCTTGAGC 180935 29 100.0 32 ............................. ATATTCCGAGCGTTGCCAGCCTGCTGCGCAAT 180874 29 100.0 32 ............................. GCGGCGGCGTTAGAGCGCGCGCCAGCGTTTTC 180813 29 100.0 32 ............................. ACGGCATCTGCGAAATTCATGTTGCTAAATAC 180752 29 100.0 32 ............................. GCTGCGTATAAAGGCTGCAGACCGGAGAGAGG 180691 29 100.0 32 ............................. ACTGCGATTCGTTGACGATTATTCCTCCGCGA 180630 29 100.0 32 ............................. CGTTATTTTAAAAGCTGACGGCGAAGTGGTGG 180569 29 96.6 32 ............................A GCGCACCCGAACCATTACGGGGCTTGCCATTC 180508 29 100.0 32 ............................. GCCGAGTTCGTCAATGCTATGAATTTTATAAC 180447 29 100.0 32 ............................. CCGGACAACGCGGTCAGTACAGATTTCATTGG 180386 29 100.0 32 ............................. TTTTTTTACTTCCGCTGGCGAAGCGGGCGAAA 180325 29 100.0 32 ............................. AGTGGCGTTAAAAATGTCGCGGGTAATTTGTT 180264 29 100.0 32 ............................. TGCTGATTTCGTTTGCAGGGAAAATGGATTTT 180203 29 100.0 32 ............................. GGCAGCGAGGCGCAGATCCCGCAGCTTTACCA 180142 29 100.0 32 ............................. TTCGGCCAATAACCGACTATGTGAGGGACTTT 180081 29 100.0 32 ............................. CCCGATAAATTCACTCTGTGTCATACGGTGAT 180020 29 100.0 32 ............................. GCATCGACGCCCGTATCGTTATCGACAAAATA 179959 29 100.0 32 ............................. ACACGTCGTTAGGTGTTCCGTACTGGGAGAAA 179898 29 100.0 32 ............................. CCAGGCGACCGTATCTGGGTGCGTGAAACGTG 179837 29 100.0 32 ............................. CCGCAAGCCGTATCAACGAATTACTGCTCGAA 179776 29 100.0 29 ............................. GGGGTCACTTGGGTGAAACTGAACTAACT 179718 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================ ================== 39 29 99.2 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAAATTGTTGTGATAAAGTTGGTGAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT # Right flank : GTCCACTAACGTTATCGATCCTGAGGGTGGTACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTGGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATTCC # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //