Array 1 182818-180290 **** Predicted by CRISPRDetect 2.4 *** >NZ_VUDF01000003.1 Klebsiella pneumoniae strain 167D3 contig_0003, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 182817 29 100.0 32 ............................. TTAACCATTCTCCCCGGCTCAGTACCTGCCCG 182756 29 100.0 32 ............................. GAGCAGGCACCCGCCGCAACGACGAAGAGCGC 182695 29 100.0 32 ............................. AAATCAGCCAGCACCACGATTCTGGGAAATTT 182634 29 100.0 32 ............................. ACAGGCTTACCCGTATTGAGACGGTTGCTGAA 182573 29 100.0 33 ............................. GAAACCCCATCAGATGACCCTCCCCATGTTGGC 182511 29 100.0 32 ............................. TTGCCTGGTCTGCTTGGTGATGATCCGTGGTA 182450 29 100.0 32 ............................. TACAGAACGACTGAGGCGGCGTGTATTGCATA 182389 29 100.0 32 ............................. GATCTTAACTCTATTGCCAATGGCGCAATTCA 182328 29 100.0 32 ............................. GGCGATGCGCGCTCTGCTGGCTATCGGTAAAA 182267 29 100.0 32 ............................. AATGCAGCAACCGGCAAATATATCGCCGGTAA 182206 29 100.0 32 ............................. GGGCTGCCGCACGCCTGGGACGAGTCGAGCCC 182145 29 100.0 32 ............................. CCGCAATAACAAAAATAAATGAGGGTTAAAGT 182084 29 100.0 32 ............................. GTAAATGGGAATGAGTAGAAGAGCGTCATTGG 182023 29 100.0 32 ............................. CCCCCGCGCACATGCTTAAACGCGCTATCACG 181962 29 100.0 32 ............................. GGCATCTGTTGTGTAATGTTGAGTTTTTTTCA 181901 29 100.0 32 ............................. CAGGTTAAACATGTAAAAAATGACCGTCGCCG 181840 29 100.0 32 ............................. CACATTGCCCGGTCTGAAAAGTATTTGAAAAT 181779 29 100.0 32 ............................. TCCGCACAGTCAAACGCTCCAGACACCAACCC 181718 29 100.0 32 ............................. CCGGAACACCACCAGTAACAGCTACTGTAGGC 181657 29 100.0 32 ............................. TGACCCTGTTGATTTTGTTCCAGGTAATACGT 181596 29 100.0 32 ............................. TTAACCTCGTCGTTCTGGTTTCCGCCCAGGAT 181535 29 100.0 32 ............................. GAACCTGAATTCGAAGGGTGGGTCATCCTTCC 181474 29 100.0 32 ............................. GGACCCCGAGCGACCCGGTCACCCTCCGACCT 181413 29 100.0 32 ............................. CCGTCGAACGGCGGTTATATCCATCTTGAGTC 181352 29 100.0 32 ............................. ACCGATCCCACAATTGCGGCGGTTGAGATTGA 181291 29 100.0 32 ............................. TGCCGGACGTTGTACCTGTGAGTTAATTCTTC 181230 29 100.0 32 ............................. CGATAACCGGGCGTTTCGACTGAACTCACCTC 181169 29 100.0 32 ............................. TTAATACCAGGGGGCAGGTTCAGCAGGTCCCC 181108 29 100.0 32 ............................. CCGCTTTAACCCGCTCCGGCAGATCCGGGTGA 181047 29 100.0 32 ............................. CCCTCCGCTTTCAGGGTGTGGCTGATATCACC 180986 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT 180925 29 96.6 32 .............A............... TGGGTAGAGGTTAACTGGTTATTGGTCATTGA 180864 29 100.0 32 ............................. ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 180803 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 180742 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 180681 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 180620 29 100.0 32 ............................. GCAATCCCAGAGCGCGAATATCTTGGGCTCTC 180559 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 180498 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 180437 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 180376 29 100.0 29 ............................. GGGTTCACTTGGGTGAAACTGAACTAACT 180318 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================= ================== 42 29 99.3 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCCTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT # Right flank : GTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATTC # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [51.7-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //