Array 1 81431-80923 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_SITO01000031.1 Hafnia alvei strain PCM_1224 614, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence             	Spacer_Sequence                 	Insertion/Deletion
==========	======	======	======	============================	================================	==================
     81430	    28	 100.0	    32	............................	ATCCTGTGAGCCCATCGTGTCAATGTAGGTGA	
     81370	    28	 100.0	    32	............................	ATCATGCTGGAGGCAGATCTTTTAATTTCTGA	
     81310	    28	 100.0	    32	............................	GCACAGAGCAAGAAAAAGCACTCCATAACGGA	
     81250	    28	 100.0	    32	............................	TTCATTTGGCCGGTGGTAATGCCCAACCCCTG	
     81190	    28	 100.0	    32	............................	ACATGATACCTACAGGCTCAGACATCGAGCTA	
     81130	    28	 100.0	    32	............................	TCGACAGCTTATGGCGTTCTGCGTCACGTCTA	
     81070	    28	 100.0	    32	............................	GATGACGAAAATGAGTTTTCTGATTTGCCATG	
     81010	    28	 100.0	    32	............................	GGAAAAGCGTGGCCATGTCATGTTGTTGCTGT	
     80950	    28	 100.0	     0	............................	|                               	
==========	======	======	======	============================	================================	==================
         9	    28	 100.0	    32	GTTCACTGCCGTACAGGCAGCTTAGAAA	                                	       

# Left flank :   AGTCATCGTTTTGTTTCCGTATCAAATCAAAATGTATGCGGCCACCAAAGACGCTAACCTCGGGTGGCAGCTCAGGCGGGGTTAGCGTTACCGGGACATACGGAAAACCGGTGCTTCAGTTGAAGCCCCCACCTGAGCCACCATTATTCAGAGTGGGTCAAAGCGTGTGGCATTATGTCATAACGCCGACATGTATGTCTGGTCTGGAACGCTAATTCCGACTACGGATTTTTCCGTAGCCAGAAAACTATATGCTTGTGATTTCAGCAATGAAACGGGCTGGATGCATTTACAGTGAGTTACTGTTAGATATGGAATCAACTTCTCGGAAATGAGGGGGGTAAAATGCAAAAAACTTCATTTTCCAGCCAACCCTTTTTTTCGCCTACCTATAACTCATTGATTTTATATAAGTGTTCATCGGGAACATAAAAAAGGGTTATGCAGTGAGAAATGAGTTACGGATCTGATTATTCGAAGCTTTATGCGAATATTCTACA
# Right flank :  AGTGCCAATAAGTAGTTGAATATGCTCAACCTCTATTTCTAGATTATTTATATATAAAAGGAATTTATATGTCTTGGAATAAATATGCAGCTGTTGCCTATGTTAAAAACCACGCGCATGCACATAGTACCGGTTATTGTGCTAGGGCTGTTGCCAAAGCTATCGAGGCAGGAGGTGTTTCAATAGTTTCTGCAGATGCAAATAATTTTGAACGTTCGCTTCGTGGGGCTGGATTTAGGGAGGCAAATGGTCAGCCGGAACCTGGTGATGTCGCAGTCATCGAGCCAATACCAGGACATCCGCACGGGCATGTTTGCATCTATGATGGTCAAGATGGTTGGTATTCCGATTTTATGCAGCATGACATGTATCCTGGGGGAGCTTATCGGAAAATAAAACCTCAGTTTAAAATTTATAGGCATTATTGATTATGAATAATTTATTGATATTATTATTTTTTATTTCTTCACCTGCCTTTGCTGTCAGCGATATTAACAACG

# Questionable array : NO	 Score: 6.26
# 	Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTCACTGCCGTACAGGCAGCTTAGAAA
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     R [6,8] Score: 0.37/0.37
# 	Reference repeat match prediction:         R [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [-7.70,-8.00] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      NA [0-0] Score: 0/0.41
# 	AT richness analysis in flanks prediction: NA [73.3-65.0]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0,5.24   Confidence: HIGH] 

# Array family : I-F [Matched known repeat from this family],   
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