Array 1 4110-2579 **** Predicted by CRISPRDetect 2.4 *** >NZ_AOLZ01000062.1 Halobiforma lacisalsi AJ5 contig_62, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 4109 30 100.0 34 .............................. TCGCCATTAGGCGGTCACCTCCTCGTCGTCGGGA 4045 30 100.0 34 .............................. TCGTTGTGCGTCGGATGGATGACGGCGACGGCCT 3981 30 100.0 34 .............................. GACGCCGATCCTTGTCTCGTGCTCATGTGCCTGT 3917 30 100.0 37 .............................. CTCGAAGACGGCGCGCACGTCCTGATTTCGGGGGCGG 3850 30 100.0 36 .............................. CCCTCTTCGACGATGCGTGCGCTCAGTTGGCCGTGC 3784 30 100.0 36 .............................. GCACGCCGGTCGTAGTGCGCGTTCGACTCCATGAAC 3718 30 100.0 36 .............................. TCGGAAGTAGCGTACTGGATGCGCCAGATTGTCGTT 3652 30 100.0 34 .............................. GTTCTCTCCCACTGCGCGGTCGACACCAGGGGCG 3588 30 100.0 35 .............................. ACGTCTCCGCCGGGGTAAGTCGGATTGAACGTTTT 3523 30 100.0 36 .............................. ATCGACGACGATGAACACTCGCAGATAGATCCGCGT 3457 30 100.0 36 .............................. GAGCCCGCGCACGGCCTCGCCACCCTCGACGCCTGC 3391 30 100.0 34 .............................. GCGCAAGTCCCCCGGCACCCGTCGGGGCGTGCTC 3327 30 100.0 35 .............................. GTCGACGACGGCGACGGGCCGGGAGAGTCGGAGCA 3262 30 100.0 37 .............................. AGTTCGACGCCGATGTACTGGGCGACCAACAGCGCGC 3195 30 100.0 34 .............................. TCGAGTACGCCGTACACGGCGGATGGAGAACGGC 3131 30 100.0 37 .............................. GACCTTTACCTCTACGACTCCGGAGCCCCCGAGCAGG 3064 30 100.0 33 .............................. GAGCCGCGAAGCGACGGCGGCTGGATCCTGATC 3001 30 100.0 37 .............................. CCTGACGAGGCCCCGCTCGAGGAACTCCCCGAGACCT 2934 30 96.7 35 .............................T ACCTCGATCGACGTCCACTCCAGCGGAACCTCCGC 2869 30 100.0 34 .............................. TCGGCCCCCTGGAACCTCGTTTTCGTGAGTAATT 2805 30 100.0 38 .............................. CAAGAAGGGCGACGTTCCGATTAGCCAAGACGACCAGA 2737 30 100.0 33 .............................. TCGGCGTCGCGGTACTCGAGTTGCAGTTGCTCG 2674 30 100.0 36 .............................. GAAGACCCGATTCGGGACCTTCAGGGCGTGAACGCG 2608 30 96.7 0 ............................A. | ========== ====== ====== ====== ============================== ====================================== ================== 24 30 99.7 35 GTTTCAGACGAACCCTTGTGGGATTGAAGC # Left flank : CGTTTGAATAGAAAGGTAAGTTTCAAAACGCTGGTCCAGACTGATGTTTACAGTCTGAAAAAGCATGTATTAACGGATGAACCTTACCACGCAACTGAACGGTGGTGGTGAAATGCACGTAATAGTTGTCTATGATGTCTCTAGCGACCGAACTCATATCTTTCGAAAATTATTGCGGCGAAGGTTGGAGCATGTTCAGCAGTCGGTATTCTTTGGAGAACTTACGGAAGGACAGGTCACATCAATGAAAAATGAAATTGAAGAGAAACTAGTACCGGAAGATTCAGTGGTTGTTTTTGAGTCAACGAGCCCTGCTGCTTTTGATTTTACCACGTTCGGTGCGAGTCAAGAACCAGGCAGTCGGTTCACCTGATGGAAATTAGCTTGTAGTACATGCAAATTCCATCGACCCCCTGGGGGTAGAAGGGGAATTGAGGGTCGATGGAAATGACTTTGTGAAATCGCCCGTATTATTCGCTCGTCCACCAGAATGTCGGTGG # Right flank : CGATCGCCGGATTGAGATCACTATGTCGACCCTCAGTTTAGTCAGGCTTTCTGGAATTGAAGAATAGACCAGAGCCATTTCTCTGTTTTTCTTCTGAAAATATACTTCGACCCATCTCAAGACAGTCCTGCCCACCCCATTCCGACACCTACTTTTTCCAACCACAACCACCCACAACCAAGATGCCTCGAGCGGGCCCACTCAAACAGATCCTCCGGACACTGACGGTCGCCGAACTCCGCTCTCTGCGCCGCACCCACTGCCCACAGGTCACCGAGTACGACGGCAACAAAACCGCCTTCGTCGACCGCCTCCGCAACTCACTGAAACGCTCGATCGATGACGGCGAGCTCACCTACGAGGACCTCGTCGAGTTCCTCCGCGACGAGTTCGAATCCAACGGGCCCGAACGAGCGACGACCTGCATTCGCCACACTTTAGAAGACCTCACGATCTCTCCCTGTGCCGGCTACAGGGACGGCCGCGCCGTCAGGGAACGC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAGACGAACCCTTGTGGGATTGAAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTTCAGACGAACCCTTGTGGGATTGAAGC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-3.20,-4.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [51.7-51.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 2 17500-13931 **** Predicted by CRISPRDetect 2.4 *** >NZ_AOLZ01000062.1 Halobiforma lacisalsi AJ5 contig_62, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 17499 30 100.0 34 .............................. TGGTACGAGCGCTTCGAGGCCGACGGCGAGCACG 17435 30 100.0 35 .............................. ACCTAAAAGGGGCAGGGTGGGGTGGGGCAGTCACC 17370 30 100.0 35 .............................. GGCTTCGAGCAGGAGTTCCTCGGTGAGCTCGTCGT 17305 30 100.0 36 .............................. ACGCGCCGCGGAAATCGACCGTGTTACCGTCGTTGG 17239 30 100.0 37 .............................. TCGCTCGAGGAGTTGCGCGACGGCGGTCGGGAGATCC 17172 30 100.0 35 .............................. GATCTCGAGCCGGGAACGCTCGAGTTGGTCGCGGA 17107 30 100.0 34 .............................. TCAAAGAACTCCCCTAACACACTATCATACTATC 17043 30 100.0 36 .............................. ACCGTTACGGCCGTCTCTACGTCCGCAGGTGGAAAC 16977 30 100.0 36 .............................. TACTCTTGCCTTGGTGAGACGGCCCTAACGAACGGG 16911 30 100.0 37 .............................. TGTCAGTGTCGAAGCGATTAAGCCCAGCCCAGTCAGC 16844 30 100.0 35 .............................. TCAATCACCTCGTAACCTCGTGCACAAGCGCGCGG 16779 30 100.0 34 .............................. TCGGTGTACGCCGCCTTTCCGGTGAAACCCTCCA 16715 30 100.0 35 .............................. GAAATAGAAACGTCGGTTAGCGACTACTAATCAGT 16650 30 100.0 36 .............................. TGGATCAGTGCCGGCGATGCAACGAGGCGAAGGTCC 16584 30 100.0 37 .............................. GAGAACCGTGAGGGCGTCTCGTGGCGAGTCTATGAGA 16517 30 100.0 36 .............................. GGACTCCGAGGGACTGACCATCGGGTCGTCGCGATG 16451 30 100.0 34 .............................. TGGGTCTGCCTGCCGCTCTCCCTCCGGAACGCAG 16387 30 100.0 36 .............................. GGCGTCACGGACCTCGCGAGTACACTGCTTTTCCTC 16321 30 100.0 36 .............................. GAACCGTACCAGTGCGAGATGTGGGGCCGCGTGATG 16255 30 100.0 36 .............................. CTGCCGTGCGAGTCGACCGCGAAGTCGAGGGAAGCG 16189 30 100.0 35 .............................. GGCCGTTCGGGTAGGACCCTCGTGTATGAAACGAC 16124 30 100.0 35 .............................. TGCCCCCACTCGTCGGTGAACCGCTGGTAGACGTC 16059 30 100.0 33 .............................. GGGACGTCGGCTTGCTCGAGGCGCTGCTGGAGA 15996 30 100.0 38 .............................. TCTGACCCGCGCGGGATTGGGGGTCCACTCTGACCACC 15928 30 100.0 35 .............................. TTGAGCTCGAGGCCGCCGGTGCCGCCCTCGTCGCG 15863 30 100.0 34 .............................. GGACTTAACGGTAGTCCCACGGACGAACCGGACG 15799 30 100.0 37 .............................. GCACCGAAGGCTGGCGACTGGGGCGTGTACGAGAGTG 15732 30 100.0 37 .............................. ACAGGCGCGGCTAGGGGACGTTTCCGAAGGCACTCGA 15665 30 100.0 36 .............................. AGCCCGCGGTCGACCTTCTCAACGAGGTCGTCGTCG 15599 30 100.0 36 .............................. CACTACTCGGATTGCATCGTCAAATGCGAGTGTGGT 15533 30 100.0 38 .............................. TCGCTGCCGACCTGCGTGACGAGGTGTTCAGTCCCGTC 15465 30 100.0 36 .............................. ACGCAGACGGATAGCTAACCGATCAACCACGCACGA 15399 30 100.0 34 .............................. GAAGGACGACCTCTCGGTCACCGTCGACGAAGGC 15335 30 96.7 32 A............................. AACCTGACGTCGTCGACGTCGGTCGCGAGGTC 15273 30 100.0 36 .............................. GCAACCGAACCGATCGACTCGAGTGATAGTCGTCGG 15207 30 100.0 37 .............................. TGAGCGAAACTGGCTACGAGGATTCGGGGCTCTATCG 15140 30 100.0 36 .............................. AACGTCAGTAAGACGTACGCGAGCGACCGCACGGGT 15074 30 100.0 36 .............................. GCGGGGTGGTCGCCGTGACGCCGTCAGACGTGACTT 15008 30 100.0 36 .............................. ACGTTCGATCAATTCCTTAGAGGGACGAAGGTGAGT 14942 30 100.0 34 .............................. AATTCCCGCTGATGATGTTATAACCAACATCCGA 14878 30 100.0 35 .............................. GCATGAGCGACGAGAACATCGACGATATCGACACG 14813 30 100.0 36 .............................. TTGCCTCGATCGACCTGCTCCACGAGGCCGTGGTCG 14747 30 100.0 36 .............................. AACCTGAGCGAAGACGTTGACGAAGGAACGATCAAG 14681 30 100.0 35 .............................. TCCGGTTTCGAAGGACGGACCATCGAACGGGGCTC 14616 30 100.0 35 .............................. GGCGACGAACCGGAGGACACGCTTGTCGGCATCAT 14551 30 100.0 36 .............................. TCGTGATTCGGGTCCAGGCCGGCTGCCTCGAGTGCG 14485 30 100.0 35 .............................. GTCGACTGGATCGCCGCGGCGTAGCTGATCGACTT 14420 30 100.0 35 .............................. GTCTATGAAGGCTATTCTATAGAGGAAACGTATAG 14355 30 100.0 34 .............................. AGCCTCGAGCGGGCGATCGACAAAGACCTCGTCG 14291 30 100.0 36 .............................. GGCGAGTGGCCACAGGAGGTCTACCGGCTGTACGTC 14225 30 100.0 37 .............................. ATGTTCGTGCACGACGAGTCGGAGTGCAACGCCAAGA 14158 30 100.0 36 .............................. GAGTGGCCGGTCCACATCACCACCTGGTCAGGGACC 14092 30 100.0 35 .............................. GAGTTCTTCCTCGGGGACAAGGTCGAACGGCCGCT 14027 30 100.0 37 .............................. CTCGCGGTCGCCGGTATCAGCGCCACCTCGAGAATAG 13960 30 93.3 0 ............................AT | ========== ====== ====== ====== ============================== ====================================== ================== 55 30 99.8 36 GTTTCAGACGAACCCTTGTGGGATTGAAGC # Left flank : AGGGCTATCTCAACTTTCTCGGCCTCTTGCTGAACGATGACACCGACTGGTTCAGCAAAATCCTGAGTTACGAGTCATCGGGATGAGCGAATTTCCATCGACCCCTCGGGGGTAGAAGGGGAATTGAGGGTCGATGGAAATGACTTTGTGAGACCGCCCGTATTATCCGCTTATCCGCCGGAATGTTGGCG # Right flank : GCAGTCGCGGCGATGAAATCGATTCCAACCTCGGCCCAATAGTTTCATATGTTAGTAATTTAGTGATATCAACGTGGCATTAAACAGTAGGAATAATCAGGTGGTCTGACGGATGCGTATCGAACTCGCACTGGATGCGGTCGCGGATGCAGCCTACGATACTGCTGCACATCACAAAATCCGGGGCCGCATTTGGCGTGCACTCGAGAACACGGATGAATACGCTGAGGTCCATGACACACACCATGGGGTCGGCTTTTCGTTCTCGAATATCTTTCCGTGGGGCCCAATTGAAGAGGGTGATCGTCGGTATATCCGAATCGCTTCCCCGCGTCGCGACCTCTTGGATGAACTCATTGCCCATTTTAGCCGGAACCGTGAGTTCGAGGTCGGGCAGATGCGTTTTGAAGTGGCGGATATCACCGGCCATGCACCCCAAGTTGGTGAAGCAGGCTCGACTGGCCGTATGGATACTGGGACGGGCGTATTCTGTGCACTCA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAGACGAACCCTTGTGGGATTGAAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTTCAGACGAACCCTTGTGGGATTGAAGC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-3.20,-4.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [55.0-46.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], //