Array 1 1372680-1371759 **** Predicted by CRISPRDetect 2.4 ***
>NZ_OU015321.1 Cloacibacterium caeni isolate Isolate2 chromosome 1 Array_Orientation: Reverse
Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion
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1372679 36 100.0 29 .................................... ACCCAAGCGAAAACGAATTATACCACAAA
1372614 36 100.0 30 .................................... AGAACGCATTGTTATTTGCTTTTGAAATCA
1372548 36 100.0 30 .................................... ATTCTCTGTAAATGCTTATTGAGATACTTA
1372482 36 100.0 30 .................................... CCTACCAATTTCATGTCAATTGGAGTTTTC
1372416 36 100.0 30 .................................... CAATTATCATAACCAAGGTAACGTACAAGT
1372350 36 100.0 30 .................................... AATAATAAAATCTATGAATGCAATCGTGGT
1372284 36 100.0 30 .................................... CAAGAATTAGAAACAAAAACCATCTATTTA
1372218 36 100.0 30 .................................... AAACTTCAAACTTGGGTTAAGGACCATTAT
1372152 36 100.0 30 .................................... TTATAACTAACACTTAAACCTTAATACAAT
1372086 36 100.0 30 .................................... GGATTCGATGGAACCGAAAGCGCAGGAGTA
1372020 36 97.2 30 .......................T............ CAATTAGAGAAGAACAAATATTTGGCTTAT
1371954 36 91.7 53 ..........................G.....GG.. CGACGAAGTCAATTAACGATATTAAAATATTGGCGGAATTTTCTACATCAACG GAGCC [1371924]
1371860 36 94.4 30 .........................TT......... TTTGTGCTAGTCAAAAGAATCGGACTAACC
1371794 36 77.8 0 ..........................CCGA.GA.CG |
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14 36 97.2 32 GTTGTGGTTTGATTAAAGATTAGAAAAAACGATATT
# Left flank : AGAAATAACCATCATGTATTAATTTATAAAGATGAAAAAGGAAATCTAAAAGAAGAAGTGGTAACATTTTGGACGGTTGTAGAACGCAAAAGAACAGGACAGTCAGTGTATCAACTACCTCTTGATGGAAAAGAAATAGTCACTACTTTGCATATCAATGATATGTTTTTATTAGGTTTAAGCGAAGATGAAATCAATTGGGAAAACCCAGATTATAAAGTTTTAAAAGAGCATTTGTATAGAGTGCAGAAATTTACATCGGGTGATTATTATTTTAGAAAAGCACTAACATCATCAATACAAAATCTTGAAGAAAAACAACAAATAAATAGTTTTGGTTTTGGTAAAAATGGTTGGTCAACACATAATCCAATAAAAGTAAAAATTTCAGTTTCAGGAAAAATTATTCCATTTTAACTAATTTCGTATAAAGTTCTTTGACATTAACGGATAATCATAAGCAACCAAACCACAACGGAGTTTCGGCGATAGCTCACTTC
# Right flank : AGGTTCGACGAAGTCAATTAACGATATTAGTTGGCTCTCTACCTTCTAATAATCAATAGGTTAATGATGAAATATCGTACATAAAAATGCTTCTTTTTTGCCTTGATACAGCAAGATTGAAGCATTTTTTGTTTTCTATGTGTTGAATTTTTAGTTTTTAATAATCAATAGGAACGGGCTTTAGCCCGTTTTGAAAATTAAAAGATCTAATGGCTTTAGCCAAAAGTTAAAAGATAATTTTTTTCTCTAAAATAGTTCTAATTGTACTGGCTGAGGTGATTTTGGCACTTCGGATTTTCCCCAGAAATCATTAACAAAGCCTATAGAAGCCACAATTTTCTAAATAATTTCCCCACCAACCTGATCTGCTGTATCTTTGTAGAAAATACTAGAAATTGAATCTTAGAAAATTAGCCGATAAACAGAATGTTTTCTTGTTGCTGTTGCTGGTGATGGTTTTGGCGGGAAAACTCATTCCTTACCAAGAATCTTACAATCAA
# Questionable array : NO Score: 6.15
# Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:-0.04, 8:1, 9:1,
# Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat : GTTGTGGTTTGATTAAAGATTAGAAAAAACGATATT
# Alternate repeat : NA
# Directional analysis summary from each method:
# Motif ATTGAAA(N) match prediction: NA Score: 0/4.5
# A,T distribution in repeat prediction: NA [Repeat is AT rich:75.00%AT]
# Reference repeat match prediction: R [matched GTTGTGGTTTGATTAAAGATTAGAAAAAACGATATT with 100% identity] Score: 4.5/4.5
# Secondary Structural analysis prediction: R [0.00,-1.00] Score: 0.37/0.37
# Array degeneracy analysis prediction: R [11-0] Score: 0.41/0.41
# AT richness analysis in flanks prediction: NA [63.3-56.7]%AT Score: 0/0.27
# Longer leader analysis prediction: NA
# ----------------------------------------------------------------------------
# Final direction: R [0,5.28 Confidence: HIGH]
# Array family : II-C [Matched known repeat from this family],
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