Array 1 615691-614991 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP007445.1 Gilliamella apicola strain wkB1 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 615690 29 100.0 32 ............................. CCTTGTTTTATTAATCCGTCTCACCCTGATTG 615629 29 100.0 32 ............................. CTGACCCATATTGCGAGGTAGTCTCAAATTAT 615568 29 100.0 32 ............................. TTTTATCCTCGCAGGTTTTCGTCTGCGCTGTT 615507 29 100.0 32 ............................. AGTACCAGCTTTATATGAAGCTCTGACCTGCT 615446 29 100.0 32 ............................. GCAATCACCAATTTTTGAAAACGTGAGATGAC 615385 29 100.0 32 ............................. GGTATTTGATAATGATGATGATCTCCTAGATT 615324 29 100.0 32 ............................. CTTTTACATTTGAAATGTTCGACTTCCATGTA 615263 29 100.0 32 ............................. GGTCCATATTTCAGTTTTGGCTATGTATTTGA 615202 29 100.0 32 ............................. ACAACGCCTTCCCAGTCCAAACACTCCCTGAG 615141 29 96.6 32 ..A.......................... GGGTACATTTTGGGCGGTCGTATTGAGTTTTT 615080 29 100.0 32 ............................. TATTTTATCCCAAATCGCCCTAAATGGCGGTT 615019 29 89.7 0 .......................T..T.A | ========== ====== ====== ====== ============================= ================================ ================== 12 29 98.9 32 ATGTTCCCTGTATACACAGGGATAAACCG # Left flank : TGAAATGGTACTAACTAAAAATCGGTGCTTAAGTCTAATTTATGTAAATTTTGTAACCGAACCACATAAGCAACCAATTCTAAAAATAGAGTGATTTTGATAACAACAAAACATTAAAAACATCTGAAAGAAATCATATTAAAAACATTAAAAAGTTGGCGGAAATTTCAGCAAATGATTTTAATTAATAAACAATAAGTTATAATAAGGACGTTCCCTGTATACATAGAGATAAACCTTCGATGTGTTAATATTGCATAGCATTTTTTGCTATTCAAAAATCGCAATTCTGTATTTCATTGTTTACTTTTTTTAATTACATGAAAAATATAAATTTATCGGTAGAATCCCGTAGAATCTAATTTTAACTTCTATTAATTTTAATTAATCAAATAAAAACATAGTGTTATACATTATGATTTTGATGAAAAATATCCAAAAAAATCGGTAGAAATTTGACAGTCAAGATTTTAATTATAAAACAGTATGTTATAATTGGT # Right flank : ATAGTAGGCATAAATTTTTTCCTACAGTGCTACAATTGGTTGGTATTTGTAAACAAAATTTCGCCACGGTTATCGACCTGTGGAATGATTTGCGAGAAAAAACAAAATCACCTGATAAAAAGCAACTATACCCTATTACCATTACAAAATTGCAGGGCGCGCAAAGGTGGGCAGTCAAGGTCTTAACGATTCAAATACCTGTTCATAACCAAATATCTATTTACACTCATTAACACAAAAAATCAGATTAATTTAGCTAATTTGTATAAACTATATACATATTCACACTGGATACCATGCCACAATATGAGGATGTAGCATGATAAAGCAAGTAGCTATTTTAGGAGATATGACCAATTATGGCGGTAGGATTATTACAGCGTCAGGGCAAGGGTATTGTGGTATGGATGGTGTTGCTCTATTAGGTGATTTGGTTTCCTGTCCTAAATGCAGCAGTACTGGCAGAATCATAGAGGGGGCAAACGATTTTATTATCGATG # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATGTTCCCTGTATACACAGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.17%AT] # Reference repeat match prediction: R [matched GTGTTCCCTATACACATAGGGATAAACCG with 90% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-8.20,-8.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-76.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 619500-619227 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP007445.1 Gilliamella apicola strain wkB1 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 619499 29 100.0 32 ............................. ATCCTTTTTACAATCAGCTTTTATGATTTGTT 619438 29 100.0 32 ............................. TGCCTGACAATTACAATCCAGAAACTAGGGAG 619377 29 100.0 32 ............................. GCGGCAGTGGTTGGAATTCCTATTTTAATGTT 619316 29 100.0 32 ............................. ACAAGGTATGGCTTGTAGCACCGCCAATAATT 619255 29 86.2 0 ....................A..T..T.A | ========== ====== ====== ====== ============================= ================================ ================== 5 29 97.2 32 ATGTTCCCTGTATACACAGGGATAAACCG # Left flank : TTATCATTTTTAAGCTAAATTAAAATTATTAAAATAATCAATATAGTTATTGTTAGCAACCGATTCGTTAATATCAGCTTTATAACATTAATTATGCTTTCAATAAAAATATTCGTTAAATCAATATGATTTGATTATAAAACAACCTAAAAAGTTGATAAAAATTTTAATGTTGCTATTTTAATTATAAAACAAACAGTTATAATTAGAGTGTTCCCTGTATACATAGAGATAAACCTTCGATGTGTTAATATTGCATAGCATTTTTTTGCTATTCAAAAATCGCAATTCTGTATTTCATTGTTTACTTTTTTAATTACATGAAAAATATAAACTAATCGGTAGAATCCCGTAGAATCTAATTTTAACTTCTATTAATTTTAATTAATCAAATAAAAACATAATGTTATAAATACTAATTTTGATAAAAAATAACCTAAAAAATCGGTAGAAATTTGACAGTCAAGATTTTAATTATAAAACAATATGTTATAATCGGT # Right flank : ATAGTAGGCATAAATTTTTCCTACAGTGCTACAATTGGTTGGTATTTGTAAAAAAAATATTGCTACCGCCATCGACCAGTTGAATGATTTGCGAGAAAAAACAAAATCACCTGATAAAAAGCAACTATACTCTATTACCATTACAAAATTGCAGGGCGCGCAAAGGTGGGCAGTCAAGGTCTTAACGATTCAGATACCTGTTCATAACCAAATATCTATTTACACTCATTAACACAAAAAATCAGATTAATAGAGCTATGTTGTATAAACTATATACATATTCACAGTGGATACCATGCCACAATATGAGGATGTAGTATGAGTAAGCAAGTAGCTATTTTGGGTGATGCAACTAATTATGGTGGTAGGATCATTACAGCGTCAGGTTATGGGTATAGTGATGGTGATGGCATTGCTCTATTAGGTGATTTGGTTTCCTGTCCTAGATGTAGTAGTACTGGCAGAATCATAGAAGGGACAAACGATTTTATTATCGATGG # Questionable array : NO Score: 5.92 # Score Detail : 1:0, 2:3, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATGTTCCCTGTATACACAGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.67%AT] # Reference repeat match prediction: R [matched GTGTTCCCTATACACATAGGGATAAACCG with 90% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-10.20,-10.20] Score: 0/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-76.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.91 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 3 1802325-1802112 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP007445.1 Gilliamella apicola strain wkB1 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 1802324 29 96.6 33 ............T................ ATACCTATGGTGGTGAATGGGAAGAAAAAAAAC 1802262 29 100.0 32 ............................. CGCAAAACAAGATTTGCAGGATGGATTAAAAA 1802201 29 100.0 32 ............................. CTCTGGAATGTTGGTTCATCAAATTCTTTGAG 1802140 29 93.1 0 ............T........A....... | ========== ====== ====== ====== ============================= ================================= ================== 4 29 97.4 33 ATGTTCCCTGTACACACAGGGGTAAACCG # Left flank : GATATATGGTGGAGTTTATAACCTGTTTGACAAAGATGTCTCAAATGCTGACTTCGGTAAAACTTTAGAAGGTCGACGTTACTTCATAGGTACCGAGATTAACTTCTAAATTAACTAATAAGTATTTTCCTATAAAAAAGATGACTGTTCAAACAGCCATCTTTTTCTATTTATACTAATATAGATTATTTATAATCCAAAAATAGAAATACCTTTTTTCACCCATCGATAAAATAACTTAATGCAATGTCAACATAGTAACTTTTTGCTATTTAATAAAATCTAATTATATATTTCAAGGTATTATTATTATTAATCTAGTGAAAAATAACAATTTATTGGTAGAATCCTATGAATATTAATTTTAACTACCGTTAATTTAAATTAACTCAATAAAAACATAGTGTTATAAATACTAATTTTATTACAAATTAACCCAAAAAATCGGTAGAAATTTGACAGCCAATATTTTAATTATAAAACAGTATGTTATAATTGGT # Right flank : TTCTATAAAGCTGGTTAGTCAGACTAAGAACAAAGAATTGACTAAAATAATTCACGAAATGGATTACATCCCATGGATAGCGGTATCAACTCCAAGAGATGTTTATGCTCATGAGACGGGACACGCATTACATTAGCTACACCAGGAAGAAATTGATAATATCATTAAGAAATTGTGAGGACGAGGTTGGGCACATGCAATTAGTAATTATGCTCTACATAACAAACGAGAATTTGTTGCTGAAGCGTTTTCGTTGTATATTGAAAATCGCAGAGAAGCTAAAAAGCGACTTTCTCCAGAATTATTTAAACTTTTCGAATCACTAGATAAGGACATTAAATGAATAAGTTTGATTTATTAGTTGAGCAAGCAACTGAACTGATTAACACCGAGCCACTTCCTGATGATGCAGAGGAGCAATTGCAACAAATTATCGACCAAGCTGACGACAAAACGGAAAGACACATGTTAGGGAGACTTGCTGAAGCTCTGTTTGTTAT # Questionable array : NO Score: 5.73 # Score Detail : 1:0, 2:3, 3:0, 4:0.87, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATGTTCCCTGTACACACAGGGGTAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCTATACACATAGGGATAAACCG with 90% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-8.40,-9.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-76.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 4 1952018-1951318 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP007445.1 Gilliamella apicola strain wkB1 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 1952017 29 100.0 32 ............................. CCGCCCAAAATAGGTCATATAACCCATCCACA 1951956 29 100.0 32 ............................. CCGATCTCGCTGAAACCCATACATTTAAATGT 1951895 29 100.0 32 ............................. TAGGCATTAATAGCTCAGAGCTTATATAGGAG 1951834 29 100.0 32 ............................. CTTTTTCTTTCGATGGCTATGTAGGCGTTTCA 1951773 29 100.0 32 ............................. CACTACCAAAGTTAATATTTACTGGTCAACAG 1951712 29 100.0 32 ............................. AAACGGCAGTGATAATTAATGAATTAACAGTA 1951651 29 96.6 32 ............................A TTTACTGGAACAAAAATTAGACCTATCCGAAC 1951590 29 100.0 32 ............................. AATTGTAGCGGATAAGAAGTATTTTTACATAA 1951529 29 100.0 32 ............................. ACGAGTTAGATGCATTGTTAAATGAGGAAAAC 1951468 29 100.0 32 ............................. TGTTTGACATATAAATAGTTCTCCTAATCGGT 1951407 29 100.0 32 ............................. TTCAATGAGTTAGATAGGTTAGGAGAATGGAA 1951346 29 96.6 0 .............A............... | ========== ====== ====== ====== ============================= ================================ ================== 12 29 99.4 32 ATGTTCCCTGTATGCACAGGGATAAACCG # Left flank : TCAGTATAAAAATCAATGAATAATTCAAATTAACTTTATGTTTATAAAGAAAACATAATATTTGGTTAATATAAGCATTTGTTTTAATATCGAGTAAGAGATTCGAAATAACAGAGTTTACTTAATAGCTTTCACTTAAAAAATATATTGGAGTATTTAAAGATCGTTGAGATGATATTAACTAAAAACGAGTATATGAATCATAGATTATGAAAATTTGGTAACTAAGATATACAAACAAACCACTTTAAAAATAGTGTAATTTTGATAACAACAAAGCACTAAAAACATCTCAATAAAACTTATTATTTTTTAACTGAATGAAAAATATAAGCTTATCGGTAGAATTCCGTAGAATCTAATTTTAATTTCCATCAATTTTAATTACTTTAATAAAATCATAATGTTATAAATACTAATTTTGATAAAAAATAACCTAAAAAATCGGTAGAAATTTAGCAGTCAATATTTTAATTATAAAACAGTATGTTATAATTGGT # Right flank : CTTATTTAGCAACATAATCAATGGGTCCATATTGGTTTTAGTCTGAATAACAACCGTTAAATCGTGTTAACAGCAATCAAACAGGGCGGTAAAACTGTTTACGTGAATGGGTTGATTTAAATAACTGTCCACAAAAAGGATAATACTATGTTTAAACGGCTTGGAATAATCAACAGAAAATCATAGTGAGATAGTGTTAATGTCTCATGGTAATGAGACAATTTTGTTAGTTGTAGAGACGTATTTATTTGAAGAGATAATTGCATCATGGGTCATAGCAACATTAATTACCATATCTATTTTTTGTTTATACGCAAAATATGTTAGTCCTGAAATTTGGAATTATATAGTCGCGTTTTTATTTGGATGATGTATGAATAAATCAAAAATATTAGGTGCCGCATTAATTGTCGTTATTTTTGTTCTAATTATTTATTTCGGTTACAACAATTATCAGGAAAAAATAGACTCAAAAACGATAAATTAGAATTAACCAATAA # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATGTTCCCTGTATGCACAGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.72%AT] # Reference repeat match prediction: R [matched GTGTTCCCCGTATGCACGGGGATAAACCG with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-8.20,-8.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [68.3-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 5 1961078-1960681 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP007445.1 Gilliamella apicola strain wkB1 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 1961077 29 93.1 33 ..A..........G............... ATGTCGCGTTACCTAAAACCCAAATCATCACTA 1961015 29 100.0 33 ............................. TTCAAAATTGATCAGTGCATTTATGTTATCTAC 1960953 29 100.0 32 ............................. GTTATTTGGGCATCTTAGCAGAATTCGTATTA 1960892 29 100.0 32 ............................. CTCGAACAACTCGAAAAACAGCATCAAATTAA 1960831 29 100.0 32 ............................. GGCGTACGCCTTGTCGCCCTTAGTCAATTTCT 1960770 29 100.0 32 ............................. GCTGTTCGAGCTGGTGCGGTAGTTTTTCGTGA 1960709 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================= ================== 7 29 99.0 32 ATGTTCCCTGTATACACAGGGATAAACCG # Left flank : CAGTATAAATATCAATAAATAATTTATTTATCTTAAATCTATTGTTATAAACAAAATACCATGTTGAGCTAACATAAACATTTACTTTTAAAATTGAGTAATAGATTACAAATAACAGCGCTTATAAAATTATTTTCATTCAAAAAATATATTGGATTACTCAAAATTACAGAAATGCACTTACAAAAAACGAGTACTTGAGATTAATTTGTGAAAATTTTATAACCAAGCTACATAAACAAGCAACTTAAAAAGTAGAGTCATTTTGATAACAACAAAGCACTAATAACATCTCAATAAAACTTACCATTTTTTAACTAAATGAGAAATCAGAACTTATCGGTAGAATTCCGTAGAATCTAATTTTAATTTCCATCAATTTTAATTAATTTAATAAAAACATAACGTTATAAATACTGGTTTTAATAAAAAATAGCCTAAAAAATCGGTAGAAATTTAGCAGTCAATATTTTAATTATAAAACAGTATGTTATAATAGG # Right flank : AGATAGGAGTTTTTTATGCTGTATTTTGTTAGATTTTTTACGTTAGTATTTATTTATTCTTCTTGTTTTGTAATTCCAGCTCAAAATATTGTAAATGCTGGATTAATCATAATTTTTGATGTGACCATTTATTATCTTGTTTTTTTTAAATATACAAAAGCAGTTGTTAAAAGTTTTAATAAAATAGGGGTAGAAACTTTTAAAAGTAACTATAAAAAAAGCAATTTATATATATCAAGAAATTATGCTAGTGCAATATATTTTGATGACGTTGAAAGAAAAATCCACTTTTTAAATCCAAGAAGATGTGTTTCTAAATTTTGTTATTCAGATTTAGTAGAGGCTGAATTTGAAAAAAATACATTAATTCTATATTTTACTGGAGAAAAAAGGCTGAGTGCACCATTCTATTATAAAAAAGAGGATTTTGGTCATTTACATTCAATGATAGGGGTTATATTTGATAGAGGCTGAATTTAATAAAAATACATTATTTCTAT # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATGTTCCCTGTATACACAGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.17%AT] # Reference repeat match prediction: R [matched GTGTTCCCTATACACATAGGGATAAACCG with 90% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-8.20,-8.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [78.3-78.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,4.87 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 6 1964411-1963772 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP007445.1 Gilliamella apicola strain wkB1 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 1964410 29 100.0 32 ............................. GGCGTTGCATATAAAACTCCTATTTATTAAAA 1964349 29 100.0 32 ............................. GTAAATAACATGCGACAAAAACTATTTAATTC 1964288 29 100.0 32 ............................. CCACCTCGTTTTACGTCAATAAAGTTTTGCAT 1964227 29 100.0 32 ............................. GGAATAATGAAAATGACAAATATTATCGAAAT 1964166 29 100.0 32 ............................. TCTCAGATAAATGTTCTATTGGAGAAGAAAAG 1964105 29 100.0 32 ............................. TTATCGCACAGCGCTACCGCTAGCACTTTCAC 1964044 29 100.0 32 ............................. ATTTGGAATAAAAGGATGAAAAAATGGATACC 1963983 29 100.0 32 ............................. TCCTGATACCTATATCCGTCAGGATTGGTTGA 1963922 29 100.0 32 ............................. CGGATTCTCATATTGGTGAAATGTATTTAGAT 1963861 29 100.0 32 ............................. GGGTCGTTTTGCTGTATCTATTATATTATGCT 1963800 29 79.3 0 .............A...CT..T....T.T | ========== ====== ====== ====== ============================= ================================ ================== 11 29 98.1 32 ATGTTCCCTGTATGCACAGGGATAAACCG # Left flank : TTCAGTATAAAAATCAATAAATAATTCAAATTAACTTTATGGTTATAAAGAAAACATAATATTTGGTCAATATAAGCATTTACTTTTAAAATTTAGTAATAGATTTGCAATAACAGCCTTACATAATGGTTTTTACAAAAAAATATAGTTGATTACTTTAAGATTGCTGAAATGATATTAACTAAAAACGAGTATATGAATCATAGATTATGAAAATTTGGTAACTAAGATATACAAACAAACCACTTTAAAAATAGAGTAATTTTGATAACAACAAAACAGTAATAATATCTCAATAAAATCTACTATTTTTTAACTAAATTAAAAATATAAACTTATCGGTAGAATTTCGTAGAATCTAATTTTAATTTCCATCAATTTTAATTAATTAAATAAAAACATAAGGTTATAAATACTGGTTTTGATGAAAAATAGCCTAAAAAATCCGTAGAAATTAAGCAGTCAATATTTTAATTATAAAACAGTATGTTATAATTAGT # Right flank : TGGAGGAGCAATGATTGATTCAGCAGTTGCAGATAGCCTTGATGATTAAATAGAGGAGTTTACAAAGTGGAACATACGTTAAATGAAAAAGATCTTTATATTGCTCTTTCAGATCTATTTGTAGATAATGAAGTTGATTACAACCATATAGCCTCTGTAGTAAAATTATTTCCAACATCCTATGTCGAACATGCTTTATTTAATTATGTCGCACCTTATTGTTACCACAATATGCTTACGCCAGTCCCATCTGTATGCTACTTTTTTGATGAAGATGAATTATTAAGTGCAATTGATAATATCAAAAGAAAAGAAAACCGTCCCATTAGTAAAATCAAAATGCGTATTTTAGCTTTCTATCTCAAGTTTAGATTTAAAGATGAATGGCAGAAAATAAAAAGCCTATTATGATTATTTATGTTTAAAATATTATTTAAATTCAATTAATTATATTAATTTGTTATAAACATAGATATGAAATTTTGTCAAAAAGTTTCAGA # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATGTTCCCTGTATGCACAGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.72%AT] # Reference repeat match prediction: R [matched GTGTTCCCCGTATGCACGGGGATAAACCG with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-8.20,-8.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [60.0-80.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 7 2637485-2636055 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP007445.1 Gilliamella apicola strain wkB1 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ========================== ==================================== ================== 2637484 26 100.0 35 .......................... CCGCATTTATTGGATAGCGGAATTAAATCCATGAC 2637423 26 100.0 35 .......................... CCGCTCATTTTCATTGCCGATTTATAGTGATATAG 2637362 26 100.0 35 .......................... CCGTTACGACCTCGTCACTGGGCGTGGTTAGCCAA 2637301 26 100.0 35 .......................... CCGCCGAGCAATATTTGCAGGTTGGACAGATCTAC 2637240 26 100.0 35 .......................... CCGGTTTTCATCTCCATTGCTATAGTTTAGTACTC 2637179 26 100.0 35 .......................... CCGACGAATTGAATAAAAAAATAATTTATAATTTT 2637118 26 100.0 35 .......................... CCGACATGAAAGTTGGTGACATGATCATGATGAAA 2637057 26 100.0 35 .......................... CCGAGCTTTGTGCAGAGGGTCTGTTGTGTGTTACC 2636996 26 100.0 35 .......................... CCGTTTTGGTGTTGCGCTGTTTCGGTCTTGCGTTA 2636935 26 100.0 35 .......................... CCGTGTGGTTATACACCTCGAAAAAATCAGGTGCG 2636874 26 100.0 35 .......................... CCGAAATTAAATGGTTATGTCAAAATAAAGAGCGT 2636813 26 100.0 36 .......................... CCGCAAACTTAACTCGCCGAACAGGTAATCAGTGAC 2636751 26 100.0 35 .......................... CCGTGCGAGCGAGGCTTTGTCGATTTTAGGTGGAA 2636690 26 100.0 35 .......................... CCGTATTGAAAGATCCTGATTCTGCAAAATATTCT 2636629 26 100.0 35 .......................... CCGACTTTGTATCAACTAAATTTCCCATTATTAAT 2636568 26 100.0 35 .......................... CCGCTAAGAGTAGAATTAGGATCAGCGAATTCAGA 2636507 26 100.0 35 .......................... CCGCGCTTTAGCAACTGCTGTGCTTTTTTCCTGTA 2636446 26 100.0 35 .......................... CCGCGAATACACAAGAACCCGCGGCGCAGGCATTT 2636385 26 100.0 35 .......................... CCGACGTTATGAATCGAATTTTTAATAAAGAGGAA 2636324 26 100.0 35 .......................... CCGTCTAGATGTTCTCCATAATATTCATCTTTACT 2636263 26 100.0 35 .......................... CCGCCGCCTCATTCCTCAATTACTCCCTCATCTGC 2636202 26 100.0 35 .......................... CCGCAAAAGCTCCGTATGAAGCACCTGATAATCTC 2636141 26 100.0 35 .......................... CCGCATATAATTTATCTGCTTTTATATCTGATACT 2636080 26 100.0 0 .......................... | ========== ====== ====== ====== ========================== ==================================== ================== 24 26 100.0 35 GTGTTCCCTGTATACACAGGGATAAA # Left flank : GCTTATTGAAGAAGTTTTGTCCGCTGGTGGTATCGAACCGCCTCTACCACATGATGATGCCCAACCACCAGCTATCCCAGAACCTCAATCTTTAGCCGATAGTGGCTTTAGGAGTCGCTAATATGAGTATGTGTGTTGTGGTAACTGAAAATGTTCCACCTCGATTACGTGGTCGTTTAGCAATTTGGTTACTTGAAATTAGAGCCGGAGTTTATATCGGTGACATATCAAAACCAATAAGAGAAATGATATGGCAACAAATTGTTAAACTTGCAGAAGAAGGCAATGTAGTCCTTGCTTGGGCGACTAATACAGAATCAGGATTTGACTTCCAAACTTATGGCGCTAATAGAAGGGTTCCGGTAGATTTAGATGGACTAAGATTAGTCTCTTTTTTACCTATTGAAAATCAATAGGTTAACGTTCTTTAAAAAATTAAAAAAATTGGTAGATTTTTGGAGTGACAATAAATCTAAATAAAACAATTATATATATTTAGA # Right flank : CTATATTCGTCATTTTGCAGGGCTTTCTGCAAATTGTGTAAGGATAAATCAGCTTTTACCTGATTTTTTATTTAACTGAAATCCTTTGTTGGATAAGTTATTGCTAATTTGCTCTAAGTCAGAATGTTCAGTTTTTTCTGAAACATTAAATAATTGAGCAAAATATTATACAGTTTTGTATCCATTTTGTTTTATTAGCGGTTTATCTAAAAAAGCTTGTCTTTCTGTTAGTATTGGATACCTTCTTGTTCAATAACAACACAATGATTTGATTATAATTAGTTAAAATAGTTTTTATATCACAAAGATCTTCAATAACTTGTTGCAATGATGGTATTGGAAAACACAATAAGGTGTAAAAGTAGATTTAATTTTTGTCTAATATCTTTATACTTATCGATAATTTGTTATAGGGAATAATATGTTTTTAATAGGTTTTTGAGATTATTTGCGTTAAAAGCATAGATTATGGTAGATTTTTCTTATTTATTATGGATATT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCTGTATACACAGGGATAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.72%AT] # Reference repeat match prediction: R [matched GTGTTCCCCGTATACACGGGGATAAA with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-8.20,-8.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [63.3-81.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //