Array 1 40642-40207 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACOPC010000008.1 Hungatella sp. L36 H4_ctg008, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ================================== ================== 40641 33 97.0 34 ......................C.......... TCCTGCTGCTTCTGGCCTCCACAGGGGAGACGCT 40574 33 97.0 34 ......................C.......... CGCCGGAGAAAGAAGGAAGTATATGAAAAAATAT 40507 33 100.0 34 ................................. TCATTATGTCCTGTTCCGTCAATCCCAATACATA 40440 33 100.0 34 ................................. TCCAATCTTCTCAGCCCATGTATACGTCTTAGTC 40373 33 97.0 34 ..................A.............. CCCAGCTGATGCCGTATTCGTAAAGTTACCAGCT 40306 33 93.9 34 ..................T....A......... CTCTGAAGGAAGTGCAAATCATACACTTTCTCTA 40239 33 69.7 0 ...C.T......A.T..CCA.A..TC....... | ========== ====== ====== ====== ================================= ================================== ================== 7 33 93.5 34 GTCACCTTCTGTGAGGAAGGTGTGGATTGAAAT # Left flank : ACGATAAGGAGTACAGAAAGGCGTTGAACATCTGCGGATCAAAGTCCGGGCGCGACTGCGACAAGGTGAAGGAGGCAGGCCTGACCCCCTGTTTTATTGACGGTACCACAGCATTTGAGGAAGCGAATATGATTTTTGTCCTGCGGAAACTGTACTCCGATCCCATGCCAGCTGAAAATTTCCTGGATAAGGAAATTGATCAGAAATGTTATCCGAATAAAGACTATCATACGATGTATGTGTCGGAGATTGTGAAAGTGCTTGTGGCAGATTGCCAGGCTGACTAATTGTGAAGGGATTTCGTCTTAGATAAAAGTCAGATAAGAGGGTAGTAAGCTGGTGCGAATCTGAAGTAAGCATGAAAATACCGGGGGATTCGCACCGGGAAAATGAGAGAATAGGTAGAAGAAGAAAGATCGCTATTGATTTTGTTGGAGAATATTGTACAATATAGTTAATGATAGGGGGAGGGAGTGGGGGAGGTGTTGTGGAGAATTGCG # Right flank : AACCATATCCTCCCTTCCAACCTCTCATCACAACAAAAAGAACCTTCAGAAAGCAAATGCTTCTAAAGGTTCTCTTTTTCTGATAACAATATCCTCTCTAATCCCCAAGATAATAAACCGCCGTAAAATACCCCTTACTATTATAATAAAGCGCATTCCCAAGTACGCTGCTGTCAGCCAGCGCCTCCGTCTCCCCGCCGCGCTCCGATGCACCAGCACAGATCTCAGTCTGAGTTTTCGATGCTTCTGCCAGGCTGGTATAAGCGCCTGTCACGGCTCCTTTCAGAATGTAAATGTCCCCTTCATATACCGTCTTCATCACAGTGTCTGCGCTGGTCTGCCACAAAGTATAGGTTCCATTTTCCAGATCTGCGATGACTCCTGTTTCACTGCCTTGTGAGGAAGGCGTTGTTCCCTTGTCATACATCAGATAGCCGTATGAATTCGAGTCCCCTGCGTTGGGATCCAGGGAAATTAGTTGGCTTTCGCCGGTCAGCGCG # Questionable array : NO Score: 5.50 # Score Detail : 1:0, 2:0, 3:3, 4:0.68, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.56, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACCTTCTGTGAGGAAGGTGTGGATTGAAAT # Alternate repeat : GTCACCTTCTGTGAGGAAGGTGCGGATTGAAAT # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:54.55%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.70,-4.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [12-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-53.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : NA // Array 1 135135-130545 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACOPC010000009.1 Hungatella sp. L36 H4_ctg009, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ==================================== ================== 135134 33 100.0 33 ................................. CCTCGTGGTAATTGGTGCGGACGGTTATGCGAA 135068 33 100.0 34 ................................. TTCGCATCCGATCACGTTGTCGGAGACGGGAAGA 135001 33 100.0 35 ................................. GCGTCGGTGAAGCTCAGGCCGAGGGCCTCACCTCC 134933 33 100.0 35 ................................. TACAAGATCGCGGAGGAATACCGGGGGCTTGCCTT 134865 33 100.0 33 ................................. ACGGGAAAGGGCGGGTTTAATACAGCGCTCTTC 134799 33 100.0 34 ................................. GACGTTATTATCGGCGAATACACAGCGGAAAAGG 134732 33 100.0 33 ................................. TGAACAAATTCGCGAAGGACATCGCAGTCTATA 134666 33 100.0 34 ................................. AACGCTCCGCTGAGGCTGGGGAGTATCTCCCGAT 134599 33 100.0 33 ................................. CGAAGATCGCGGTTTCCTATGCGAATCCGGGAA 134533 33 100.0 34 ................................. CCCTTGATATCCGTAATCACCGGCGAAGCAGCAT 134466 33 100.0 34 ................................. TTTATCCGAGATGGTATTTTGCAAAGACGAAATA 134399 33 100.0 34 ................................. TGCCGAAAAGGGTGAAAAGCTTCGGAAGATTAAA 134332 33 100.0 33 ................................. TTTTGTGCTTATATTTCCTTCACTGTCCAGGTA 134266 33 100.0 34 ................................. CCATGTATTACTCCTTTTCTAACCGATAATCAAA 134199 33 100.0 34 ................................. ATTCGGAAAACCTCAACAAATTCAAGCGAAATGG 134132 33 100.0 33 ................................. GGTTCACTGTTTTCGGCCCATGGCCTGGAGGTA 134066 33 100.0 34 ................................. ACAATGCCAGTAGCGTGCCGCCCTGATCTGACGA 133999 33 100.0 34 ................................. ACGGAAGGTGAAGAGCGTGCTGCCAGGGACGAGG 133932 33 100.0 34 ................................. TCAACGCACTAAAAGAAGCCGGGTATACCACTAC 133865 33 100.0 34 ................................. CTCTACATCAATCTCAATCTTGATCTGTTTTTCC 133798 33 100.0 34 ................................. ACTGAAAGAAACATGCTTTGTACGTTCCAATTCC 133731 33 100.0 33 ................................. CGTGTGCATATGAGAACGATGGAAGAACCGCTC 133665 33 100.0 33 ................................. CAGAGTAAGCGGTACGAAAAAAGGAGTAGTTGG 133599 33 100.0 34 ................................. TATGTGTATGAACCGAAGCTCAGGAAAGTAATTG 133532 33 100.0 33 ................................. ATGGTATCCGCTCTGCTCACATGTATCCGCATA 133466 33 100.0 35 ................................. TGCTGTAATTAGGCATTGAATTGGTTTCCCACTTC 133398 33 100.0 34 ................................. GTTTTGTCACATGATTTTGAAGAAAGGAGGAGCA 133331 33 100.0 33 ................................. ATTGTTAGCGGTTCCATTATTTGCGCACCAATG 133265 33 100.0 33 ................................. AAATTATCACTGTCAATAATAACGCGGTTTCCC 133199 33 100.0 34 ................................. TGCCAATAGATACAACGCCCCATTTATCTTCCAA 133132 33 100.0 33 ................................. CTCAAAATTAAAACTATACATTGACACATAATC 133066 33 100.0 34 ................................. CGGTTACATCACTCCATGCCGGTTTATGCCCTTC 132999 33 100.0 35 ................................. CCATCATATTACCGATATTGACCATATCCTGGGAA 132931 33 100.0 34 ................................. CCGCTATGCTTTTATACGGGGTAGCTTCCCATGC 132864 33 100.0 35 ................................. ATATTCTGCTTTTGACTGCTCATACTTTGTCTTGT 132796 33 100.0 33 ................................. ACGCCAGTGCAGTAGGGCGTGACCGAGTTCATG 132730 33 100.0 34 ................................. CGTGATACTTAATACCTCTGCAATGTCCCGCAAT 132663 33 100.0 35 ................................. TCCAAAAAAATACTCTCTATTAGTTACCGCTGCCG 132595 33 100.0 34 ................................. TCCACCTTGATCTTTTTAGACTCCACAGCCTCAA 132528 33 100.0 34 ................................. TGACCAACTATGGAGGCGAGGATTTAAATACCTT 132461 33 100.0 35 ................................. TGTTTGACGATACCGAAGAAGATAGTTCGCAATTT 132393 33 100.0 33 ................................. TTAATCAGTTTTACCGCAACATGGTAACTCTTG 132327 33 100.0 33 ................................. CCAATCACTATGATACGCTTCCGGTACAATTCC 132261 33 100.0 34 ................................. CTTTGCTGATTTTGTCCCATTTGGTCTTATCATT 132194 33 100.0 34 ................................. AATAATAGTTCCATTTTTTAAGATCATAGTGTCC 132127 33 100.0 34 ................................. TTTCTCATCGAACGCCACTACAAAGTCCCACTGC 132060 33 100.0 34 ................................. CTCAAAGACACAAAGCCAACTGGCAACGAGGAGC 131993 33 100.0 34 ................................. GCCGGATATGTCCCGTCTGGCCTGCGATACCACC 131926 33 97.0 35 ........................T........ CAGCGCAAGAGCTCAACCATAACCATATCCATCGT 131858 33 100.0 35 ................................. ATTGAACCATAGACGGCATATACGCAGGTCAAAGA 131790 33 100.0 35 ................................. GTATACTGTCCGCAGTAGCCTTTCTCCCGATTCTC 131722 33 100.0 35 ................................. TCTACACCCAGGTTAAAAATTTTATTATCTGCGAT 131654 33 100.0 34 ................................. AATCCAAACCGTAAGCTACGGCGCTCTTCCGCCA 131587 33 100.0 33 ................................. AAAAAGCTTAGCTAGTATAATTCTACCTTTAGG 131521 33 100.0 33 ................................. CGCTACGCTCTGAAAGAACGGCACGACTGTACC 131455 33 100.0 34 ................................. CATACAGGAAATAGCAAGTGTAAATGCTCAGATG 131388 33 100.0 33 ................................. ATTATCATTACGCAGAGGATAAAGGCAAATAAA 131322 33 100.0 36 ................................. CCTTCTGCTATAATCATGTTATCAGCCCCGCCAGGC 131253 33 100.0 35 ................................. ATCTTTAAAGCAGTACTTTTCCGCAATTTGATATG 131185 33 100.0 34 ................................. AGTATAGCCGCCTTGCCTTTAAGCTGTATAATCT 131118 33 100.0 34 ................................. CCTGATAGCAACGTGCCTTTAAATCGTAGAACCG 131051 33 100.0 35 ................................. ATTGATGCCCATCCCCGTTTTCCTCCCTCCTTTAA 130983 33 100.0 34 ................................. ATCAGCCGCCAGGTATCCGGGGCTGACGGGAGAT 130916 33 100.0 35 ................................. CGTCTTATACTGTACTTACAGGTCCATGCCCGGAC 130848 33 100.0 35 ................................. TTCCAGATGTCATGATACACTTTGATAAGTGGGTT 130780 33 100.0 34 ................................. GTTAAGCCATACGGCAAAGTCAAAGGATTTTTCG 130713 33 100.0 35 ................................. TCGCTGGTACTTAATCATGGCATCGTAGTATTCAG 130645 33 81.8 35 ...CT...C......AT.A.............. ACACCCGCAGCCATGAACATCTCAGTTTTGTAGAT 130577 33 75.8 0 ..T.....C....C....A.T...C...T...A | ========== ====== ====== ====== ================================= ==================================== ================== 69 33 99.3 34 GTCTCCGCTAGCGATGGCGGAGTGGATTGAAAT # Left flank : TCCGCCATTTTTCTGGAAGTAGGAGGCGTTTCTCTATGCTGGTGCTGATCACCTATGATGTAAATACCGAGACCGCTGCGGGAAAGACGAGATTGCGTAAGGTCGCAAAGCAATGCGTAAACTATGGTACCAGGGTACAAAATTCGGTATTCGAATGTATTGTGGATAACGCCCAGTGTGTGATGTTAAAAGCGGCGTTGAAGGACCTGATTGATGTTCGTGTTGACAGCTTGAGGTTTTATTATCTGGGCAACAAACATGACACGAAGGTGGAACATTTTGGTGTCGAAAAAGGTGTAAATGTAGAAAAACCTCTCATTTTCTAGCCTGTGAATTACGGTGCGAACCAGAAGTGATCATAAAATCCCTGGGAGGTTCGCACCGAGAATTTTGCGGTTATGGAGGGGAAATGGGAGAATTGGATGAGTTGATTCGATGAAATGTGTGCAAATTGCATATGATTATTGCTGATTGTATGGTGTAATATGTGCGAGTTTGCT # Right flank : TCGTAAGATTATTGCAAATATGAACCGTTGAGGGGACTACATCAGTAATGGCAGAGTGTATTAGATTTACGCAAAAAATCAGTTCTCAGACGATAAAAGTAAATAAATAGATTGAGGAGAGCAAAGAGTGAAGTATATTTTTATACATGGACTTGGACAGGGGCCAGATAGTTGGAATAAAACAGTTTCCTGCATGAGAGAGCAGGAAGAGATTCAATGTCTGAACGTATTTGCATTTAAAGAGGGATCAGAGATTTCATACAGAAAAGTATATAAGGCTTTTTCGGCGTACTGTGAGTCTATAAAAACGGAGTTTGGGCTTTGTGGTCTTTCTTTGGGCGCTGTGATTGCGTTAAATTATGTGGTGGAGCATCCGGGAAGAGTAAAGTCACTGGTCTTGATAGGGGGACAGTGCGTGATGCCGAAGGGGCTTTTAAGATTGCAGAATATGATATTTCAGTTGATGCCGAATGGGATTTTTAAGAAAATGGGGATAGGTA # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:0, 3:3, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCCGCTAGCGATGGCGGAGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [8,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-2.00,-5.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [15-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [60.0-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : NA // Array 2 145413-142932 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACOPC010000009.1 Hungatella sp. L36 H4_ctg009, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 145412 32 100.0 34 ................................ TCCCCGGTTCTCAAGTTAATTGACAACGCGGAGA 145346 32 100.0 35 ................................ ATCGAATTTGCCAGCATTTTTATCGAGGAAACCTC 145279 32 100.0 35 ................................ TCGTCCTGTTCATCGTTATGATCCCACAATCTTTT 145212 32 100.0 34 ................................ AATTCGGCGGTGCCGGTCCCGCGTTGTAGGTCTT 145146 32 100.0 33 ................................ TAATGAGTTTTTTGCCTCTTCGAGCCCGTCGCT 145081 32 100.0 34 ................................ GCTAAAACAAAGTTTTCCTCGGTGATTTCTGCCG 145015 32 100.0 33 ................................ CAGAGTAAGCGGTACGAAAAAAGGAGTAGTTGG 144950 32 100.0 34 ................................ TTCTGGCACCCGGATTATGACGAGGAGGATTCTT 144884 32 100.0 34 ................................ CTTCTGGTTCCGGCGCTGAATCGCTCGGTCCCTC 144818 32 100.0 33 ................................ TTCTTGAGCATATGGTAATTGGTGAGCAGCAAC 144753 32 100.0 33 ................................ TTGTTCCCCCGAGAGTATGGCCGCCCCTCTTTG 144688 32 100.0 33 ................................ ATTTACGAGAAAGTCATAATAAGGTTTTATTAA 144623 32 100.0 36 ................................ AAGCCAGATGCCATGGCCTTGCGGGGCCGAAGCCAG 144555 32 100.0 36 ................................ TTATTTACTTTTTTTGGAAGGGACTCCTTTTTGACC 144487 32 100.0 36 ................................ CGGACTGGCAGTAAAACTGTCTGAAGACGCATCAGT 144419 32 100.0 35 ................................ ATAAAGTATCTTCCTTCATCATGAAAAAAGTATCA 144352 32 100.0 34 ................................ CTCATGATCCTGCTCCTTTCAGTCGTGTGGCTCC 144286 32 100.0 35 ................................ CTCCAACCGCCCAGCTTTTAGCTGTCGTAGCGCTT 144219 32 100.0 33 ................................ GTTTGTGATCCTGCTGGCGGAGTAGGAACATAG 144154 32 100.0 35 ................................ CGGAATATAATCGTCTTTTCCACACTTGCGTGGAA 144087 32 100.0 34 ................................ TGGTCTGAACACTTTCTCGAATGGAAGAAAATCA 144021 32 100.0 35 ................................ CGTCAAAGTAAAAACAACGGATCAGATGCCCCGTG 143954 32 100.0 34 ................................ AGGAGATGGAGCAGAACGGAGATCCGGGCGATAA 143888 32 100.0 33 ................................ CGGAACACTGTCACCGGCCTCGTCCGTCAGCCA 143823 32 100.0 34 ................................ CTCCGGCAGCACCGGAAACATTAATATGCATGGT 143757 32 100.0 35 ................................ TGAATATTGAGTACTTTGGTCTTTTCCCATGTATG 143690 32 100.0 33 ................................ GTATTACAAAGTATCTGGCAGCGCGCTGTATAT 143625 32 100.0 35 ................................ ACTTTAAGCAAAACTTTAAGCATTTTTTAATAATG 143558 32 100.0 34 ................................ GCTTGTATATCTCTAAAGTTAGATACTTTCTTCT 143492 32 100.0 34 ................................ AGCCTGGACAACTTCATAAGGGAAAAAGGTGGAA 143426 32 100.0 33 ................................ TTCCAGTTTATCCGCTTCGCTGTCCACATCAGT 143361 32 100.0 34 ................................ CTTCACCGTCTAAATCATTCACTGTCTCAATCCT 143295 32 100.0 34 ................................ CCACAACGCCCAGCACCGCCCCAATAACACCGCA 143229 32 100.0 35 ................................ TTTGCAGTCAGATCCTGATCCTCGATAATGTCCTC 143162 32 100.0 35 ................................ AGGAGGTAGAGGCCGCGATTATTCAGCGGGGCGTC 143095 32 100.0 35 ................................ TACGAATGCCGGGCGCATACCCGGCAGGATTACAA 143028 32 100.0 33 ................................ CCGGATACCGCGCCATCTGAATGGGGAGATATC 142963 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ==================================== ================== 38 32 100.0 34 GTCACCACTGATGCAGTGGTGTGGATTGAAAT # Left flank : AGAAGGATGAGCGATTTAACAGAGCGATATGGGGGGTATGTGGATTTTGCGGAAATCGAAACATTGCAGTACCTCTCCGAAATGGTGCAGGAAGTATCGTCTGGAGTATATTTAAATAATATAGACAGATATTCAACCAGAAGAAATATGAAAATGGATTTAAGCGGATTAATGGGAGCTATGACGTTCCAAGGAGAGTTATCAGTATTCACTCCATGGCTGAATGCGGCCTCTGTCTTACATATAGGCAGAAATGTTACATTTGGATGCGGAAAAATTGATGTGGTGTTTGGAAATATAGAATAATCTAAAAAAACTAATAAATTATCGGGTGCGAACGTCAAGTGATCGTGAAAATGCCTGGAGGTTCGCACCTGAAAATGAAGAAATCGGAGATGAAATTTAATTGTTTTATTAGAAATAAAGTGTTAAAATAGAAATATAGACAATTTTTGGTTAGTTTGTGATAGATTGTGTTGCTGAAATTGTGCAGATTTGCT # Right flank : TCTCATTGTTGACAATTTGAATCACCTTCCCTCGAGGCCACCACTGATTCAGTAGCACAAATATATATACTCTTAAATAAGACAGTAGATATAGTCATATATTCTGGCTGTCGTATCAGTGTAAAAAGGAGGTATTTCATGTTCCTTGCCCACATAAGCCAAGATCAAACTCGAGAGCAAACGATCGCTGCCCACTGTCATGGTACAGCACATCTTGCCGGTGATTTTGCATCTTCTTTCAAGTGTAAGGAATGGGGGTACGGTTGTGGCCTGATCCATGATATCGGAAAATATTCGGAAAAGTTTCAAGAACGTCTTCATGGAGGAAGCATCACGGACCATGCGACGGCAGGCGCCCAGGAATTATATAAAAGAAAAAATATCTATGCAGCCTACTGCATTTCCGGCCATCATTCGGGATTGCTGAATGGCGGGACTTGTGCCGATTGTGCAGGAGAAGCCACTTTTATGGGAAGGATGAAAAAGGGGCTGGAAGATTA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACCACTGATGCAGTGGTGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.80,-4.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [55.0-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.14 Confidence: HIGH] # Array family : NA //