Array 1 45586-45370 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHQYV010000014.1 Faecalibacterium prausnitzii strain DFI.5.48 GDGMKAFO_14, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 45585 29 75.9 31 .............A.......TGATC..A TCTCTCCCTCGCCGGTGCGGAGCCACTGCTC A,CATA [45563,45567] 45520 29 89.7 32 .............A...A..........T ATGTTATTGCGTGGATATACGCAACAACAAAT 45459 29 100.0 32 ............................. TGCAACGCCAACTTCCGCGGCATGATGGACTA 45398 29 79.3 0 .............A.......C.T.C.AA | ========== ====== ====== ====== ============================= ================================ ================== 4 29 86.2 32 CTTTTCCCCGCATGCGCGGGGGTGATCCC # Left flank : AAGACCCCCAAAACCCCGCAGTGCGGGGAACCGTGGCCGCACATTGCACAACACAGTACCAGAAGCAGTGGCTGTTGGAGCGCGCTGAAAAGCACGGCTTTGCCCTGCGGGAGGAGGAATTTACCGTGACCCGGGTGCAGTGGCAGCATTTTGCCAAGCACGGCACCCGGCCGGTGACCCTGCTGGCAGTGACCTATGAGGGTGTTTTACAGGTGACCGATGCAGAGCAGTTCCGGGCGCTGCTGTGTCAGGGCATAGGGCGCGGCAAGGCCTATGGCCTTGGACTGATGACCGTTATGCGCGGAGGAAACTGAGAGGGACGAGATGCCGGGCATGATCCGGCCGGACCTGCAGGCGCTGCCGCAGCATTTTCAGCTGGCAGAAAAAGTGGAGCATCGCGCCCTGCCGGATTGCCATTTGATACAACAGGTTTATTGCAAACTGAAGGAAACAGCGGTACAATAGCAACGGGAGACACGGTGCTACGGGACCTTTTTAGT # Right flank : AAGACCCCTCGCAAGGTTTTGCGCGAGCGCCTGAAAAAAGTACCCATAAAGCAAACGAACCGCCCCGGTTTCCGTGATGGAAGCCGGGGCGGTTTTTGTGTACAGGAGACCGGGCGGCAGGGGGGTTCTTCCGCCCGGCGCTTTCTTGCATTTCACGGAAAAATGCGCAAACAAAAAGCAGGCAGTGTCGTGGAAAGGAGGAGGAAAGCGACACTGCCTGCTGTATAGGAACCCCTGAACATTGCGGCTTGATCAGGAGGGATTTGGTAGTCTGTCCGCCGTTCTGGCTATTGCCTCGCATAGAAACGGGAGACAGTTTTTATGGGCCTGCTGTGCGCCGCTGCTGCGGCCGCATCCGCAGGAAAATGTGCCTGCATGGGCTTTGCGGGGAGAACCTTTCGGAGGTTATGGGGGATATCCGTTCCGTTCTCCCTGAGTGCACCCTTATTATGCCAGACAATCGTGGCAATTCTTTGTGGTAATTTTGAACAGTTTGCAAA # Questionable array : NO Score: 3.36 # Score Detail : 1:0, 2:3, 3:0, 4:0.31, 5:-1.5, 6:0.25, 7:0.01, 8:0.6, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTTCCCCGCATGCGCGGGGGTGATCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCATACGCGGGGATGATCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [1-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [50.0-51.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.78,4.5 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 29728-29341 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHQYV010000004.1 Faecalibacterium prausnitzii strain DFI.5.48 GDGMKAFO_4, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =========================== ================================== ================== 29727 27 100.0 33 ........................... TGATTCATGATAGATTACCTCTCTTCTTTCTGA 29667 27 100.0 34 ........................... TTACGGAATGGATGTGGTTTCACATTTCATGGCG 29606 27 96.3 33 ............C.............. CTTGTCGTGTCGTTGCCTTGTGAAATATGGTCT 29546 27 88.9 33 ...................A...T.A. CCGCTCAGGTCGGCACCGCTCAGGTTGGAACTG 29486 27 88.9 33 A...C....................A. ATTTCGATGCCGTCACCAGTGTAAATCAATCGC 29426 27 100.0 33 ........................... TAGTATTCGTAAATGCCATGAAAATTGATTGCA 29366 26 92.6 0 .....................-...C. | ========== ====== ====== ====== =========================== ================================== ================== 7 27 95.2 33 GTACAATCCCCGTAAGGGGGCGAAAGC # Left flank : CGTCCACCAGATCCCGGCACAGGCCGATCAGCGTTTCCGGGCGCTGATCCTCGGGCAGGTGGAGCTGGTGCACCTGATCTTCTGCAATGCCCAGCTGTGCCAGCTCTTCCAGCAGGCGCTGATAGTTGCGGGCGGTATCGGCATTTTCCTGCCGGATGGCCAGCAGCTGCACCGTGTCCCCGGGTTCAAGGGTATCCCGCATTACCTGCACGATGGGAAAGCAGGTGGCCGTGGGCGCACCTGCCCGCTCCCGCTGGTACAGCATGGGGTCCAGCTTTCCCTGCAAAGGTACGGTGGTGATATAAGTCTTTAGCACAGGGCAACACTCCTTTTTATAAGATTCATTATCTGCATCATACCATGAAACCGCCCCGCGCACAAGGCAGGCTGAATGAATTTATGACCGTTCCTTTCAGCGCAAAAGCACATCATTGCAATAAAGTGAATATTTTCCAGCCATCCGGCTCTTCAGTTTTGCGGTGTTTTGTGATATATTTAGG # Right flank : AAGGCAAGGAAAGTAATTTCAAGTTTCTTACTTAACTATCCACATTCCATGGGCTTTTTCTCTTTGCAATGTCAAGGAGGAATGCCCTATGCTCATCAACTTTACCAATCATCCTTCTGCCCTGTGGAGCGCCGAGCAAAAGGCTGCGGCGCAGGTCTACGGCAAGGTGATAGACCTTGCCTTCCCTGCCATCGACCCCGCCACCAACGAGGCCGTGCTGGACTCCCTTGCCGCGGTATATGCCGACCACATCCTGCACCTTAACCCGGACGCCGTGCTCTGTCAGGGCGAGTGCACCTTTGTGTACCGGGTAGTCCAGCGTCTGGAAGCCGCGGGCATCCCCACGCTGGCCGCCTGCTCCCGCCGCAAGAGCCAGGAGACCACCTACCCGGACGGCAGCACCCTGAAGCGCAGCATCTTCGCCTTTGCCGGCTTCCGCCGCTATGGCACGCCCTGAAAAGGGATTTCAATTGTTCCACCACCGTGGTATAATGGAGCCG # Questionable array : NO Score: 2.87 # Score Detail : 1:0, 2:0, 3:0, 4:0.76, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.85, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTACAATCCCCGTAAGGGGGCGAAAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-7.20,-8.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [2-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,0.74 Confidence: LOW] # Array family : NA //