Array 1 2606098-2608015 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP034248.1 Paenibacillus lentus strain DSM 25539 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ======================================= ================== 2606098 33 97.0 34 ................................A TCCAAAACCTTAAGAAACTCCGCTTCCTCGGCAT 2606165 33 97.0 32 ................................A CTCATTTAATCATCAACCCACTTTCACCAAGC 2606230 33 97.0 34 ................................A GCGACTTTGACACTATCCTCGGGGACATCACTAG 2606297 33 100.0 37 ................................. TCCGTCCTGAACGGGAACGGCGTCTGCGTCTCTTCAA 2606367 33 100.0 37 ................................. AAACTTGCCTCATCTAATTGCAATTCCGCTTGCCCAT 2606437 33 97.0 35 ................................A GTACGCACCCGGTTAAGGTGCTCACACGTTTGGGA 2606505 33 100.0 33 ................................. TGTACAAACTGTAAAGCCCTTTCTGGCAGATTT 2606571 33 97.0 32 ................................G ATCCTGTGGTATCATCCCTTGTCGCCTCCTTA 2606636 33 97.0 33 ................................C CCTACCACTGTGCCGCAATTATGGCAAAACTCA 2606702 33 100.0 36 ................................. GCAAGATCGCGCTGGAATAATGACTCTGATACATTG 2606771 33 97.0 34 ................................G GGGTGATAACATGGCTGAAGATAAAAGTAAAAAA 2606838 33 100.0 33 ................................. TGGGCTATATCGCGAATATCCATGCCCTTAAAC 2606904 33 97.0 39 ................................G CGAATTAGAAGCCTTCCAAAACGAATGGAAATGCGGTGA 2606976 33 100.0 32 ................................. TACCGTGCAAAGGTTAGTGACGGCAAATCAGT 2607041 33 97.0 32 ................................A ATCCCTTGTGATCCATCCCCTACCCCCCTATC 2607106 33 97.0 35 ................................G AAATAGAAGTGGAGACGAAGGGAAAAGATTTAATG 2607174 33 97.0 35 ................................G TCCGGGATACCGTGCGGGTAACCTTTAGTCTCGTA 2607242 33 100.0 32 ................................. AGGAAGCGTACACTATCAGCAATGACTTCTGT 2607307 33 100.0 35 ................................. GCGCTTGTAGATACCGTCAAGGTGGTTCAACTCCT 2607375 33 97.0 36 ................................G AGAATCATTGAATTTGACCGTGAATATTGCTGGGCA 2607444 33 97.0 37 ................................A ATCAAAGTCGGAATATCATCTGGAGAAAGAACTACAT 2607514 33 97.0 34 ................................G TTGTGGCGGTGCGTGGTTTGAAATAAATGCATTG 2607581 33 97.0 35 ................................A ACCCACATTGCGTATCACCTTCCGTTTCTTGTTGT 2607649 33 97.0 35 ................................A TGATAAAAGGTTGGTTTGTATCATCCATCACTGTG 2607717 33 97.0 33 ................................A TAGCAGCAACGACTGCTAATATGGTAAGTTCTC 2607783 33 100.0 33 ................................. TTGAGCCATGACAAAAACCTCCTCGTTAACGAT 2607849 33 97.0 35 ................................C ATCGAAGACTGACTAACGCACCAAAAGGCATGGAG 2607917 33 97.0 33 ................................G GTTGCCCGAGTACGATCGACATAGTAGGTCAGC 2607983 33 90.9 0 ..................A.....G.A...... | ========== ====== ====== ====== ================================= ======================================= ================== 29 33 97.7 34 GTCGCATCCCTCGCGGATGCGTGGATTGAAATT # Left flank : GATGAATATCCTCCATTTCTATGGAAGTAGGTGTGAGATATGCTAGTATTAATTACGTATGATGTAAGTACGGTGAGCAGTGCGGGGCAGCGCAGATTACGAAGGGTATCCAAGGTATGCCAAAACTATGGACAGCGCGTGCAAAACTCAGTATTTGAATGCGTGGTTGATGCCGCTCAATTTGCAACTCTAAAGTTAAAGCTTATGGATATTATTGATCCTGATCAGGATAGCCTTCGCTTCTACCAGCTTGGGAATAACTATAAGAATAAGGTTGAGCATATTGGTGTCAAAGAGTCACTAGATTTGGAAGGGCCCCTAATTTTGTAAGGTGCGAATGTGAAGCGAACATGATTCTCCAGGGACATTCGCACCAGCCGATTTACTTAAATTATATTTGTTGGAAGAAAACACCTGGGAAAAAATCAGATAAACAACAAATATTGGAGTATTTATACTTGTATTTGCGATTTTAGGGTAATTTTACCTTGAAAATCGCC # Right flank : TACTAATCGTTTTAAGCCAACAGGAAGAGATTCCTTCATTACTACTAGGATTTTAAATTTTGTTAGGTACCATGGACATCTTAAAATTTCACTTCCAAAAACAAGGCGCTACTCATCCTGAGCAGCGCCTCCTTTGCGATATTGTAAGGGGGAGGTTCCAGTGGTGCGTTTAAACGCAGTGCTGAAATAATGCTGTGTTTCGTAGCCGACCTGCCTGGCGATTTCGGCGATGGTTAGATCGGTGCCATTGAGCAGCTGGGAGGCCCGACGAATACGGATTTGCGTCAGGTAGCCATTGAACGAAGCGTCAAGCTCCTGCTTGATCATCCGGCTTAAATACACCGGAGAGGTTTGAAGCTGCTGGGCCATGGATTCCAGGGTCAGCGTACAATCGCCGTAGTGCTCCAGCATATACTGCTTGGCTCTGCGCACCAATGGGGAAATGGCGGTTTCCTTTAGCACAGTGGATTTGCATTTGCGATAGACGGCAGGCATGGAAG # Questionable array : NO Score: 5.57 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.42, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCATCCCTCGCGGATGCGTGGATTGAAATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCACCCCTCGCGGGTGCGTGGATTGAAATA with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.00,-7.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.41,0.74 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //