Array 1 529800-523947 **** Predicted by CRISPRDetect 2.4 *** >NZ_NXIE01000002.1 Halarcobacter mediterraneus strain F156-34 NODE_2_length_689006_cov_104.375, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 529799 30 100.0 37 .............................. AAGTGCTAGTAATCTTCAAATAATGCTTTTTAAGAAA 529732 30 100.0 36 .............................. CATAAAATATCATCTATTACTACTCTTATACCTCTT 529666 30 100.0 36 .............................. ACGCTTTCAGCTTGTGCAACTAGACACAGACAAGGT 529600 30 100.0 36 .............................. TTTGATATAACATTTCTACAGCCTGATTCTTTTTGT 529534 30 100.0 36 .............................. ATTTTAGAGTAAGAAAACCATAATGCAACAATTATA 529468 30 100.0 35 .............................. GAGTGACGCAGATGACCTTAATGCTATTTACCTAG 529403 30 100.0 36 .............................. AAATGAATACCAAAATTTTATTAATGCTAGAGATAC 529337 30 100.0 36 .............................. TTATTGGTCGCAAAATAGAAAAGATTGTTTCTATCT 529271 30 100.0 35 .............................. TATTAAATTAAAGGATAAAAGATGACTGAATACAG 529206 30 100.0 34 .............................. TTGAAATCCCTTTTTTAAAATTGAATTAGATTAT 529142 30 100.0 34 .............................. TACTGTAGAGATTGAAGGTCAAAGGTTATCTTTA 529078 30 100.0 35 .............................. TGTATAGATAACTAAAAAGAGATAGTTTTCTTTGA 529013 30 100.0 34 .............................. AGAAAAATATATAGGACTAAAAAGAACAAAAAGA 528949 30 100.0 36 .............................. CTGTTAGAAAGTATGGACGAGTTAACAGATGCAAAA 528883 30 100.0 34 .............................. CCAATAGAAAAGCCATGCTTCTTTATAAGTGTTT 528819 30 100.0 36 .............................. GGATTTACCTCAAAACCATCTGTAATACCGTCATAA 528753 30 100.0 35 .............................. ATTGAAGGTTTAAGGATAGATCTGTCAATTTCGCC 528688 30 100.0 35 .............................. GTAGCATTTAAAAAGCTTCAAAAAAGAAAAGATTT 528623 30 100.0 36 .............................. TTAGGTTATTTTGTTTTAGCATTACTTTCTCATTTG 528557 30 100.0 35 .............................. AGTTGCATTCTTGCAACATAAGGAACACCTTTTCT 528492 30 100.0 35 .............................. AAAGATGGAAAACCTCATGTATTTAAATTTGAGAC 528427 30 100.0 36 .............................. AGCAGATGCAATGACTAATGTTAATTCTAAATTAAA 528361 30 100.0 36 .............................. TTGTGAAATGTCTTTAATAGATCTATTACTTTCTTA 528295 30 100.0 35 .............................. GGAGAGAGCAAAGAGGTAAAAGAACTTGCAAAACT 528230 30 100.0 36 .............................. CGGCTTCTGGATAACCTGCTTCGCCTATAAGACCTA 528164 30 100.0 36 .............................. AAGTATCAATTTTACTCTTTATCTGAAAGAGATTTA 528098 30 100.0 36 .............................. AGATACTTTTTTAATGAGTGTATTAATATTAAAGTT 528032 30 100.0 36 .............................. TCTTGAGGTAAAGTTTTACTAAAACTCATCTTATGG 527966 30 100.0 36 .............................. ATTGGATTTAATAGACACTACTGATTCTTGGGCTAA 527900 30 100.0 36 .............................. TTAATTGAAAAAGTCTTAAAATGTGGTTCAATATGA 527834 30 100.0 35 .............................. TTGACAATTGATACTATTATCGTACTAGAGGCATT 527769 30 100.0 34 .............................. GGAAGTACTTTGTTTCCAGAACTAACCCATGCAT 527705 30 100.0 36 .............................. AGGGTTGAAATACTTTCTTTAAAGTACTTAACTGTA 527639 30 100.0 36 .............................. TGGACAGCTATTGCTCAAGCGTGGGCTTTGGGTTAT 527573 30 100.0 36 .............................. AAAAATTGGAGAAAATGGCGTGACATGGTCTGCTAA 527507 30 100.0 35 .............................. TTGTTTTACTTGTTCTTCTTTTTGTTTATACTACT 527442 30 100.0 34 .............................. AATTGTTAGATTGATTACAAAAAGTAACACCAAA 527378 30 100.0 36 .............................. TCATATTTCTTTTGTGATTTATTTGAACAATCTTTA 527312 30 100.0 34 .............................. ACATCAAAAAAGTCAATATCTTGACTTTTACATC 527248 30 100.0 36 .............................. AAGCTTTAACAATAGTCTTACTTATTAATTGTCTTA 527182 30 100.0 36 .............................. ACTGTTAGACACAATAGAGCAAGAGGTAAGCATAAA 527116 30 100.0 36 .............................. CTTTCTAAGTCTAGCATAGAGAAATCGTTAGCAGGT 527050 30 100.0 34 .............................. TTGTATTGTGCTTCTAAGTCAATTATTAAAAAGC 526986 30 100.0 34 .............................. AAGGAAAAAATTGCAAGATTAGCTTTTTATAATG 526922 30 100.0 34 .............................. CTTAAAGATTTAATTTTAATAGCTTCTATTTTGA 526858 30 100.0 35 .............................. AATTATTTTAAAATATTAAATAGAGATTAGATTAG 526793 30 100.0 35 .............................. TTATTTAACTTCTCGTTAAATTGTTTCCATTGTTC 526728 30 100.0 36 .............................. ACGCCTTCGCTAAATACCTGCCCAGTTACTTCTCCA 526662 30 100.0 34 .............................. ATTGTTGTTGCAATTTGATTAAAGTTTATATCTG 526598 30 100.0 34 .............................. TCCTCTTTTTCTGAGTTATATGTAGGCTTAGGTT 526534 30 100.0 34 .............................. TTTTCTTTTTGCCATTTCCAGCGCAATAGATCTT 526470 30 100.0 37 .............................. AAAAGCAGAGATTTTTAAACTAAAAGAAGCTAAACAA 526403 30 100.0 37 .............................. TGGGAAAATTATTATGAAGCTATTAGTGATTACTCTA 526336 30 100.0 36 .............................. ACTAAAGAATTAAATCTTACACAAGAAGAGCAACTT 526270 30 100.0 34 .............................. AAGATATGCCCGTAAACATTTGCAAAAAGTTGAG 526206 30 100.0 36 .............................. AAATTGAAAAATATTTAAAAAACAGATAAAAATATT 526140 30 100.0 36 .............................. AAAAAGAACAGAAGAACTCTTGTTTTTAAATAAGTA 526074 30 100.0 34 .............................. CCTATATCACTATTCGATACTTTTTCCATATTTA 526010 30 100.0 36 .............................. TAGTGGAGCTAGAAAATGCAGGCTCTTATGCAGTTA 525944 30 100.0 37 .............................. AAAATATTCCAATATCCATAAAAGCTTAAAAGAAACA 525877 30 100.0 36 .............................. AATTTTACACAAACAGTTTTGGCAAAAAGATAGGTT 525811 30 100.0 35 .............................. GTTCTAAATAGTAAATTGTTTATTGCTATATATGC 525746 30 100.0 35 .............................. TTAGATTTTTGGTAATCTTTTACCTTAAATCCTAA 525681 30 100.0 35 .............................. AATAATCTAGGAACTATAGTTACTGTTGTAGGAGT 525616 30 100.0 36 .............................. AGTTACAAAACTGTAGAGTTCTTTTCCATGGTCCAT 525550 30 100.0 36 .............................. TAATATAAACTCTTGACAAAGTTGCGAATTTATAAT 525484 30 100.0 35 .............................. TTTCTCGACTTAGATTTGGCATTTGTTTTAGCTTA 525419 30 100.0 36 .............................. CGTTCTGGCATAACCCAAACTGGTTTTATATATTTA 525353 30 100.0 36 .............................. AGAAATAGATGAAAGAGAGAAAAAAGTAGCAACTAA 525287 30 100.0 38 .............................. TCTTCTCTCTTTTCTTAGAGTGTAGATGCATGGCTACA 525219 30 100.0 36 .............................. TTTTCTATCTCCTTATGATATTTACTATCTTGAATT 525153 30 100.0 35 .............................. TAAATTGATTTTAGATCTTTTGTAATATCTGTAAT 525088 30 100.0 35 .............................. TCTTCAGTTTCATAATTTTCTAAAAGAATTGAACC 525023 30 100.0 36 .............................. TGGACAGCTATTGCTCAAGCGTGGGCTTTGGGTTAT 524957 30 100.0 36 .............................. AAAAATTGGAGAAAATGGCGTGACATGGTCTGCTAA 524891 30 100.0 34 .............................. CTATGAGACACACCTTTTACTATCTCGTTATACC 524827 30 100.0 35 .............................. TATTCTGTTGGAGAATTAGCACAAGCTAAAATTAC 524762 30 100.0 36 .............................. CAATCTCTGCCTTTAATCTTAGCTAAAGTTATTTCT 524696 30 100.0 35 .............................. GTACCTTCCTTAGAATATTCTAAAGCAGACTGTGT 524631 30 100.0 36 .............................. TATATAAAAGGTTCTAAGGTAAGTGTAGCTGCAGAT 524565 30 100.0 35 .............................. AGACGAAACAAGTAAATCAATAGAAAATAGCCTAG 524500 30 100.0 35 .............................. AAAACATCTTGTACCCATTCATTCATACTTTGTGT 524435 30 100.0 35 .............................. GTTCGAGAGTTTAGAAGATACTTCTTTAAGTCAAT 524370 30 100.0 37 .............................. CTAGGTTTTTTAACCATTATAGACCAAGTATTAACCC 524303 30 100.0 34 .............................. TTTCTTAGTGTATTTACCTCGTCTCTTACATCGT 524239 30 100.0 36 .............................. CATACTTTAGAAGATATGCAGTTAGTTCAATTTTAG 524173 30 100.0 36 .............................. CAATAAGCTTCAACAAGTCTATTAAATTCACTTGAA 524107 30 100.0 37 .............................. TCAGGAGTGATATTAATATCTCCATTTAAATTATAGA 524040 30 100.0 34 .............................. TCAAAAGCCGAATCACTTTCAAACTCTTTTTTTA 523976 30 90.0 0 ......CT.............C........ | ========== ====== ====== ====== ============================== ====================================== ================== 90 30 99.9 35 CTTGAATCAAAACATATAATGTATTGAAAT # Left flank : TTTATTAAAAGACAAGGTATAAAGTGGCAAAAAAACAAACTTTTAATTACAATTATATATTTCTATTTTATGATATCGCTGATGAATTTAGTGAAGCAGGAAAATATCGGGTTACAAAAGTCTTTAAAATCTGTAAACTATACTTAAAACATCATCAAAAGTCTATTTTCAGGGGAAACATAACTCCATCAGACCAAATAATGCTAGAGAATAAATTAAAAAAAGTGATAGATAAAGACTTGGATTTTATTTCCATAATTAAAGTACAAAACTCTGGAAGTTTTACTGAAGTCACTATTGGAAATGATAAAAAAGAAGTAGAATCTATTTTTATATAATTTCCAACCTACTTAAAAATAATATCATCTAAAAGTAGCTATAATATGGAACTTTTAAGAGTTCTTTTACAACTTATTGTTTTTATAATAATTGATTGGAAAAAGTTCTTTTAATAGCTATTTTATGGGAAAAATGATTTTAGGAATACCTATTTTGTCTTC # Right flank : CCTACCCAACCAAATGGGGCTTTTAATGTTGTTCTTCTTGAACTAAAACATATCCTATCTACCCTTTTATATCTTTTTGATATAATATTTTTATGAATTATTTTGATAACCCACTAAATATTTTTACGACTTTTATAATTTGTGCTATTATAGGAATTATATTGGCTTTCATACTTGCTCTTTTATAATTTTATTGTTAGAGTAAAATCAATTTGAGAAAGAAGTACTAATTACTTCTTAGAACTTCTTTTCTCATAAAATTCTTTTTTAAACTCTACCCAATTATCAGCCAAAATAGCTTCTCTTGCTTGGCTCATTAGATTCAGATAGTATCGGATATTATGTAGTGAAGCTAGCCTAAAGTATGTAATCTCTCCAGCACGATATAAATGATTTAAGTAAGCTTTAGAAAAATTTTGACAAGTATAGCAATCACACTCTTCATCAATAGGAGAATTATCTTCTTTATACATTGCTTTTTTGATATTTACTCTTCCTGT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTGAATCAAAACATATAATGTATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [63.3-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.18 Confidence: HIGH] # Array family : NA //