Array 1 50-993 **** Predicted by CRISPRDetect 2.4 *** >NZ_UKSB01000059.1 Klebsiella pneumoniae strain EuSCAPE_IT208, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 50 29 100.0 32 ............................. CGGATTAAACGTAAGGCCGCGCGCTGGCGTAA 111 29 100.0 32 ............................. GTGGTTTGTTACCGTGTTGTGTGGCAAAAAGC 172 29 96.6 32 A............................ GAACGGAGGAATATAAGAACAAAAGCCCGCAG 233 29 100.0 32 ............................. TAAACCGCTGGCGTGGTCAGTTGCGTGGCGGT 294 29 100.0 32 ............................. GGCGCCGGCCTGATCACTATCGGGTAACGGTG 355 29 100.0 32 ............................. GGCCTGAACCAGAGCATGATCTACACCTGGAA 416 29 100.0 32 ............................. ATTGGGTAGAGCAGGCGAACGGATGTCTTTTT 477 29 100.0 32 ............................. TTTTCACGGTCGAAGTTGTGCATGCTTTCTGC 538 29 100.0 32 ............................. TCGACGCCCCGGTGTGGGAAGACTTTGGCACC 599 29 100.0 32 ............................. CAGCGCATACGGGTTAAACCGGATCACCTCTT 660 29 100.0 32 ............................. ACATAGCGCCCGATACGCAGCGCCAGCGGGTA 721 29 100.0 32 ............................. GATCGATCGTTATTGTTGAACCGCACTATGGT 782 29 100.0 32 ............................. CTTTTAATAATATCATCGGCAATGTCCTTATC 843 29 100.0 32 ............................. CGGGACCGGATCCGCGTGGGCGACCAGGATTA 904 29 100.0 32 ............................. CACCGATATTCAGTGCGCCAACGCCATAGCAA 965 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 16 29 99.8 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : CCAGCGGGGATAAACCGTGAATATTCATTTACTAAATTAGAGACAATTCG # Right flank : CCGAGGT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [51.7-3.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.51,0.41 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 4-276 **** Predicted by CRISPRDetect 2.4 *** >NZ_UKSB01000137.1 Klebsiella pneumoniae strain EuSCAPE_IT208, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 4 29 100.0 32 ............................. CCCCCGGCCGCGTGGCCGATTGCCATTACCGC 65 29 100.0 32 ............................. TATACAGTATTATCATAGCGAATTCCCATCGG 126 29 100.0 32 ............................. GTTGGTAATTACTGCTGTGTGTTACGGATAAA 187 29 100.0 32 ............................. GCACCAACGTTTACGGTGCGGTGGTGAAACAA 248 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 5 29 100.0 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : ATTG # Right flank : TGCCGGACGTTGTACCTGTGAGTTAATTCTTCGTGTTCCCCGCG # Questionable array : NO Score: 6.06 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [5.0-33.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.24,0.27 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //